RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 GPS2Q13227 327 aa14.36□□□□□ -0.11
GPC3-201ENST00000370818 PPP4R3AQ6IN85 833 aa14.36□□□□□ -0.11
GPC3-201ENST00000370818 NUP88Q99567 741 aaPredicted RBP14.36□□□□□ -0.11
GPC3-201ENST00000370818 CUEDC2Q9H467 287 aa14.36□□□□□ -0.11
GPC3-201ENST00000370818 RWDD2AQ9UIY3 292 aa14.36□□□□□ -0.11
GPC3-201ENST00000370818 ATF5Q9Y2D1 282 aaPredicted RBP14.36□□□□□ -0.11
GPC3-201ENST00000370818 PSME4Q14997 1843 aa14.36□□□□□ -0.11
GPC3-201ENST00000370818 FXR2P51116 673 aaKnown RBP eCLIP14.35□□□□□ -0.11
GPC3-201ENST00000370818 KCNB1Q14721 858 aa14.35□□□□□ -0.11
GPC3-201ENST00000370818 CDC37Q16543 378 aaPredicted RBP14.35□□□□□ -0.11
GPC3-201ENST00000370818 SPECC1LQ69YQ0 1117 aa14.35□□□□□ -0.11
GPC3-201ENST00000370818 MAPK8IP1Q9UQF2 711 aa14.35□□□□□ -0.11
GPC3-201ENST00000370818 PCDHA1Q9Y5I3 950 aa14.35□□□□□ -0.11
GPC3-201ENST00000370818 A0A1W2PRG0 241 aa14.35□□□□□ -0.11
GPC3-201ENST00000370818 TEX33O43247 280 aa14.35□□□□□ -0.11
GPC3-201ENST00000370818 ATP8B1O43520 1251 aa14.35□□□□□ -0.11
GPC3-201ENST00000370818 KCNJ6P48051 423 aa14.35□□□□□ -0.11
GPC3-201ENST00000370818 PSEN1P49768 467 aa14.35□□□□□ -0.11
GPC3-201ENST00000370818 PAK1Q13153 545 aa14.35□□□□□ -0.11
GPC3-201ENST00000370818 SF3B2Q13435 895 aaKnown RBP14.35□□□□□ -0.11
GPC3-201ENST00000370818 RBM26Q5T8P6 1007 aaKnown RBP14.35□□□□□ -0.11
GPC3-201ENST00000370818 SRLQ86TD4 932 aa14.35□□□□□ -0.11
GPC3-201ENST00000370818 REXO1L1PQ8IX06 675 aa14.35□□□□□ -0.11
GPC3-201ENST00000370818 GMCL1Q96IK5 515 aa14.35□□□□□ -0.11
GPC3-201ENST00000370818 MAGEF1Q9HAY2 307 aa14.35□□□□□ -0.11
GPC3-201ENST00000370818 ZNF70Q9UC06 446 aaPredicted RBP14.35□□□□□ -0.11
GPC3-201ENST00000370818 USP17L15C9J2P7 530 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 USP17L13C9JLJ4 530 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 USP17L11C9JVI0 530 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 USP17L18D6R9N7 530 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 USP17L22D6RA61 530 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 USP17L17D6RBQ6 530 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 USP17L19D6RCP7 530 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 USP17L20D6RJB6 530 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 USP17L24Q0WX57 530 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 USP17L6PQ6QN14 398 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 NELFBQ8WX92 580 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 TRIM9Q9C026 710 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 ARGLU1Q9NWB6 273 aaPredicted RBP14.34□□□□□ -0.11
GPC3-201ENST00000370818 ADD3Q9UEY8 706 aaKnown RBP14.34□□□□□ -0.11
GPC3-201ENST00000370818 CNTNAP1P78357 1384 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 RHOBTB3O94955 611 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 GRB10Q13322 594 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 DLGAP5Q15398 846 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 TMEM139Q8IV31 216 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 ADSSL1Q8N142 457 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 SLC16A10Q8TF71 515 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.34□□□□□ -0.111e-7■■□□□ 12.9
GPC3-201ENST00000370818 TMOD2Q9NZR1 351 aa14.34□□□□□ -0.11
GPC3-201ENST00000370818 CWC15Q9P013 229 aaKnown RBP14.34□□□□□ -0.11
GPC3-201ENST00000370818 HERC5Q9UII4 1024 aaKnown RBP14.34□□□□□ -0.11
GPC3-201ENST00000370818 SASH3O75995 380 aa14.33□□□□□ -0.11
GPC3-201ENST00000370818 SEC31AO94979 1220 aaKnown RBP14.33□□□□□ -0.11
GPC3-201ENST00000370818 OAS2P29728 719 aaKnown RBP14.33□□□□□ -0.11
GPC3-201ENST00000370818 OGFOD1Q8N543 542 aa14.33□□□□□ -0.11
GPC3-201ENST00000370818 HAS1Q92839 578 aa14.33□□□□□ -0.11
GPC3-201ENST00000370818 LRWD1Q9UFC0 647 aa14.33□□□□□ -0.11
GPC3-201ENST00000370818 POTEMA6NI47 508 aa14.33□□□□□ -0.12
GPC3-201ENST00000370818 GUCY2CP25092 1073 aa14.33□□□□□ -0.12
GPC3-201ENST00000370818 PBX1P40424 430 aa14.33□□□□□ -0.12
GPC3-201ENST00000370818 SNAP25P60880 206 aa14.33□□□□□ -0.12
GPC3-201ENST00000370818 SPDYE2Q495Y8 402 aa14.33□□□□□ -0.12
GPC3-201ENST00000370818 CDAN1Q8IWY9 1227 aa14.33□□□□□ -0.12
GPC3-201ENST00000370818 TC2NQ8N9U0 490 aa14.33□□□□□ -0.12
GPC3-201ENST00000370818 GIMAP8Q8ND71 665 aaPredicted RBP14.33□□□□□ -0.12
GPC3-201ENST00000370818 GOLGA5Q8TBA6 731 aa14.33□□□□□ -0.12
GPC3-201ENST00000370818 FAM151AQ8WW52 585 aa14.33□□□□□ -0.12
GPC3-201ENST00000370818 UBXN4Q92575 508 aa14.33□□□□□ -0.12
GPC3-201ENST00000370818 PNMA5Q96PV4 448 aa14.33□□□□□ -0.12
GPC3-201ENST00000370818 C7orf25Q9BPX7 421 aa14.33□□□□□ -0.12
GPC3-201ENST00000370818 DDX25Q9UHL0 483 aaKnown RBP14.33□□□□□ -0.12
GPC3-201ENST00000370818 HDAC9Q9UKV0 1011 aa14.33□□□□□ -0.12
GPC3-201ENST00000370818 RRP15Q9Y3B9 282 aaKnown RBP14.33□□□□□ -0.12
GPC3-201ENST00000370818 LRRC10BA6NIK2 292 aa14.32□□□□□ -0.12
GPC3-201ENST00000370818 MEIS2O14770 477 aa14.32□□□□□ -0.12
GPC3-201ENST00000370818 PMS1P54277 932 aaKnown RBP14.32□□□□□ -0.12
GPC3-201ENST00000370818 SEMA3FQ13275 785 aa14.32□□□□□ -0.12
GPC3-201ENST00000370818 PDIA5Q14554 519 aa14.32□□□□□ -0.12
GPC3-201ENST00000370818 PPP1R13BQ96KQ4 1090 aa14.32□□□□□ -0.12
GPC3-201ENST00000370818 P2RX7Q99572 595 aaKnown RBP14.32□□□□□ -0.12
GPC3-201ENST00000370818 NUDT12Q9BQG2 462 aa14.32□□□□□ -0.12
GPC3-201ENST00000370818 BLOC1S4Q9NUP1 217 aa14.32□□□□□ -0.12
GPC3-201ENST00000370818 ZNRF3Q9ULT6 936 aa14.32□□□□□ -0.12
GPC3-201ENST00000370818 PSDA5PKW4 1024 aaPredicted RBP14.32□□□□□ -0.12
GPC3-201ENST00000370818 TBC1D8O95759 1140 aa14.32□□□□□ -0.12
GPC3-201ENST00000370818 BMP3P12645 472 aa14.32□□□□□ -0.12
GPC3-201ENST00000370818 TMEM266Q2M3C6 531 aa14.32□□□□□ -0.12
GPC3-201ENST00000370818 GJA10Q969M2 543 aa14.32□□□□□ -0.12
GPC3-201ENST00000370818 CALML4Q96GE6 196 aa14.32□□□□□ -0.12
GPC3-201ENST00000370818 CTAGE1Q96RT6 745 aa14.32□□□□□ -0.12
GPC3-201ENST00000370818 GLT8D2Q9H1C3 349 aa14.32□□□□□ -0.12
GPC3-201ENST00000370818 VPS33BQ9H267 617 aa14.32□□□□□ -0.12
GPC3-201ENST00000370818 TRIM49BA6NDI0 452 aa14.31□□□□□ -0.12
GPC3-201ENST00000370818 NRDCO43847 1150 aa14.31□□□□□ -0.12
GPC3-201ENST00000370818 ECE1P42892 770 aa14.31□□□□□ -0.12
GPC3-201ENST00000370818 SMC1AQ14683 1233 aaKnown RBP14.31□□□□□ -0.12
GPC3-201ENST00000370818 KRT31Q15323 416 aa14.31□□□□□ -0.12
GPC3-201ENST00000370818 KIAA1755Q5JYT7 1200 aa14.31□□□□□ -0.12
GPC3-201ENST00000370818 SYDE2Q5VT97 1194 aa14.31□□□□□ -0.12
GPC3-201ENST00000370818 BTNL9Q6UXG8 535 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms