RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 RIC8AQ9NPQ8 531 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 PCDHA4Q9UN74 947 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 METP08581 1390 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 H0YCG3 227 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 MECOMQ03112 1051 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 RBBP5Q15291 538 aaKnown RBP9.34□□□□□ -0.91
ABCA4-201ENST00000370225 KRT71Q3SY84 523 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 ASPRV1Q53RT3 343 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 TBCKQ8TEA7 893 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 ATP6V0A1Q93050 837 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 SLC38A10Q9HBR0 1119 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 STK38LQ9Y2H1 464 aa9.34□□□□□ -0.91
ABCA4-201ENST00000370225 N4BP1O75113 896 aaKnown RBP9.33□□□□□ -0.92
ABCA4-201ENST00000370225 PDIA3P30101 505 aaKnown RBP9.33□□□□□ -0.92
ABCA4-201ENST00000370225 PDZD4Q76G19 769 aaPredicted RBP9.33□□□□□ -0.92
ABCA4-201ENST00000370225 HAUS1Q96CS2 278 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 PPP1R12CQ9BZL4 782 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 EFCC1Q9HA90 598 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 DBNLQ9UJU6 430 aaKnown RBP9.33□□□□□ -0.92
ABCA4-201ENST00000370225 ZNF148Q9UQR1 794 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 RNF8O76064 485 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 GOLGA8FQ08AF8 430 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 GOLGA8DPQ0D2H9 430 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 PAK2Q13177 524 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 ANKRD13CQ8N6S4 541 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 MAIP1Q8WWC4 291 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 PIGBQ92521 554 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 MYO5CQ9NQX4 1742 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 UGGT1Q9NYU2 1555 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 ABCA5Q8WWZ7 1642 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 BLMP54132 1417 aaPredicted RBP9.33□□□□□ -0.92
ABCA4-201ENST00000370225 FAM26FQ5R3K3 315 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 ZNF589Q86UQ0 364 aaPredicted RBP9.33□□□□□ -0.92
ABCA4-201ENST00000370225 PRDM5Q9NQX1 630 aaPredicted RBP9.33□□□□□ -0.92
ABCA4-201ENST00000370225 ZNF215Q9UL58 517 aaPredicted RBP9.33□□□□□ -0.92
ABCA4-201ENST00000370225 INPP5FQ9Y2H2 1132 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 RIPOR2Q9Y4F9 1068 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 CDC25AP30304 524 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 EXOC3L4Q17RC7 722 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 TTC31Q49AM3 519 aaPredicted RBP9.33□□□□□ -0.92
ABCA4-201ENST00000370225 CHAMP1Q96JM3 812 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 RAB17Q9H0T7 212 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 SERPINB13Q9UIV8 391 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 PTPRTO14522 1441 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 ARHGEF12Q9NZN5 1544 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 PFKFB2O60825 505 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 BBOX1O75936 387 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 SASH1O94885 1247 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 RASSF7Q02833 373 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 NFX1Q12986 1120 aaKnown RBP9.33□□□□□ -0.92
ABCA4-201ENST00000370225 GRAMD1CQ8IYS0 662 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 C2orf69Q8N8R5 385 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 FIS1Q9Y3D6 152 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 GCC2Q8IWJ2 1684 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 PSDA5PKW4 1024 aaPredicted RBP9.33□□□□□ -0.92
ABCA4-201ENST00000370225 GOLGA8IPA6NC78 632 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 GOLGA8JA6NMD2 632 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 CTNNA1P35221 906 aaKnown RBP9.33□□□□□ -0.92
ABCA4-201ENST00000370225 PCK1P35558 622 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 IL1RL1Q01638 556 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 PRPF38AQ8NAV1 312 aaKnown RBP9.33□□□□□ -0.92
ABCA4-201ENST00000370225 SSH3Q8TE77 659 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 PIM2Q9P1W9 311 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 KIAA1468Q9P260 1216 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 IMPACTQ9P2X3 320 aa9.33□□□□□ -0.92
ABCA4-201ENST00000370225 NPR1P16066 1061 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 PHBP35232 272 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 ADCY1Q08828 1119 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 SUSD4Q5VX71 490 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 MCTP2Q6DN12 878 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 LRRC43Q8N309 656 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 CNOT6LQ96LI5 555 aaKnown RBP9.32□□□□□ -0.92
ABCA4-201ENST00000370225 PLCB1Q9NQ66 1216 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 CEP170Q5SW79 1584 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 FAM196BA6NMK8 535 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 RGS16O15492 202 aaPredicted RBP9.32□□□□□ -0.92
ABCA4-201ENST00000370225 PTK2Q05397 1052 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 CTTNQ14247 550 aaKnown RBP9.32□□□□□ -0.92
ABCA4-201ENST00000370225 ALKBH8Q96BT7 664 aaKnown RBP9.32□□□□□ -0.92
ABCA4-201ENST00000370225 PUS7LQ9H0K6 701 aaKnown RBP9.32□□□□□ -0.92
ABCA4-201ENST00000370225 OLA1Q9NTK5 396 aaKnown RBP9.32□□□□□ -0.92
ABCA4-201ENST00000370225 FANCLQ9NW38 375 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 LMCD1Q9NZU5 365 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 PPP1R12AO14974 1030 aaPredicted RBP9.32□□□□□ -0.92
ABCA4-201ENST00000370225 S100BP04271 92 aaPredicted RBP9.32□□□□□ -0.92
ABCA4-201ENST00000370225 NR2F2P24468 414 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 STX2P32856 288 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 MFAP3P55082 362 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 SKIV2LQ15477 1246 aaKnown RBP9.32□□□□□ -0.92
ABCA4-201ENST00000370225 NLRP10Q86W26 655 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 ERO1AQ96HE7 468 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 ATP10DQ9P241 1426 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 INSRP06213 1382 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 ARHGAP6O43182 974 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 ANXA13P27216 316 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 PI4KBQ9UBF8 816 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 MOSPD1Q9UJG1 213 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 CPSF3Q9UKF6 684 aaKnown RBP9.32□□□□□ -0.92
ABCA4-201ENST00000370225 PCDHA7Q9UN72 937 aa9.32□□□□□ -0.92
ABCA4-201ENST00000370225 SAR1BQ9Y6B6 198 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms