RNA–Protein interactions for RNA: ENST00000370110.5

NPM3-201, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM3, Length 877 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-201ENST00000370110 AK2P54819 239 aa21.81■■□□□ 1.08
NPM3-201ENST00000370110 CCT2P78371 535 aaKnown RBP21.81■■□□□ 1.08
NPM3-201ENST00000370110 FBXL16Q8N461 479 aa21.81■■□□□ 1.08
NPM3-201ENST00000370110 RRP36Q96EU6 259 aaKnown RBP21.81■■□□□ 1.08
NPM3-201ENST00000370110 TOX2Q96NM4 488 aa21.81■■□□□ 1.08
NPM3-201ENST00000370110 TRERF1Q96PN7 1200 aa21.81■■□□□ 1.08
NPM3-201ENST00000370110 PIGSQ96S52 555 aa21.81■■□□□ 1.08
NPM3-201ENST00000370110 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.81■■□□□ 1.08
NPM3-201ENST00000370110 SEC63Q9UGP8 760 aaKnown RBP21.81■■□□□ 1.08
NPM3-201ENST00000370110 TBX21Q9UL17 535 aa21.81■■□□□ 1.08
NPM3-201ENST00000370110 PNMA2Q9UL42 364 aa21.81■■□□□ 1.08
NPM3-201ENST00000370110 CCDC196A0A1B0GTZ2 297 aa21.8■■□□□ 1.08
NPM3-201ENST00000370110 DUSP11O75319 330 aaKnown RBP21.8■■□□□ 1.08
NPM3-201ENST00000370110 ACVR2BQ13705 512 aa21.8■■□□□ 1.08
NPM3-201ENST00000370110 QRICH1Q2TAL8 776 aa21.8■■□□□ 1.08
NPM3-201ENST00000370110 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.8■■□□□ 1.08
NPM3-201ENST00000370110 ZNF467Q7Z7K2 595 aaPredicted RBP21.8■■□□□ 1.08
NPM3-201ENST00000370110 FBXO11Q86XK2 927 aa21.8■■□□□ 1.08
NPM3-201ENST00000370110 AGXT2Q9BYV1 514 aa21.8■■□□□ 1.08
NPM3-201ENST00000370110 RNF146Q9NTX7 359 aa21.8■■□□□ 1.08
NPM3-201ENST00000370110 FBXO40Q9UH90 709 aa21.8■■□□□ 1.08
NPM3-201ENST00000370110 ZNF536O15090 1300 aa21.8■■□□□ 1.08
NPM3-201ENST00000370110 SPTBN5Q9NRC6 3674 aaKnown RBP21.79■■□□□ 1.08
NPM3-201ENST00000370110 MOXD2PA6NHM9 499 aa21.79■■□□□ 1.08
NPM3-201ENST00000370110 FOSL2P15408 326 aa21.79■■□□□ 1.08
NPM3-201ENST00000370110 PDIA3P30101 505 aaKnown RBP21.79■■□□□ 1.08
NPM3-201ENST00000370110 TKFCQ3LXA3 575 aa21.79■■□□□ 1.08
NPM3-201ENST00000370110 TMTC3Q6ZXV5 915 aa21.79■■□□□ 1.08
NPM3-201ENST00000370110 ANKRD35Q8N283 1001 aa21.79■■□□□ 1.08
NPM3-201ENST00000370110 SRBD1Q8N5C6 995 aaKnown RBP21.79■■□□□ 1.08
NPM3-201ENST00000370110 CHST13Q8NET6 341 aa21.79■■□□□ 1.08
NPM3-201ENST00000370110 IL17RAQ96F46 866 aa21.79■■□□□ 1.08
NPM3-201ENST00000370110 TBC1D32Q96NH3 1257 aa21.79■■□□□ 1.08
NPM3-201ENST00000370110 ACAD9Q9H845 621 aa21.79■■□□□ 1.08
NPM3-201ENST00000370110 DCDC2CA8MYV0 355 aa21.78■■□□□ 1.08
NPM3-201ENST00000370110 ZBTB5O15062 677 aa21.78■■□□□ 1.08
NPM3-201ENST00000370110 C6orf222P0C671 652 aaPredicted RBP21.78■■□□□ 1.08
NPM3-201ENST00000370110 CST5P28325 142 aaPredicted RBP21.78■■□□□ 1.08
NPM3-201ENST00000370110 ADD1P35611 737 aaKnown RBP21.78■■□□□ 1.08
NPM3-201ENST00000370110 RCAN1P53805 252 aa21.78■■□□□ 1.08
NPM3-201ENST00000370110 GRIN2CQ14957 1233 aa21.78■■□□□ 1.08
NPM3-201ENST00000370110 PPP2R5BQ15173 497 aa21.78■■□□□ 1.08
NPM3-201ENST00000370110 RABEP1Q15276 862 aa21.78■■□□□ 1.08
NPM3-201ENST00000370110 CCDC144BQ3MJ40 725 aa21.78■■□□□ 1.08
NPM3-201ENST00000370110 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.78■■□□□ 1.081e-13■■■■■ 35.2
NPM3-201ENST00000370110 KATNBL1Q9H079 304 aa21.78■■□□□ 1.08
NPM3-201ENST00000370110 ALDH8A1Q9H2A2 487 aaPredicted RBP21.78■■□□□ 1.08
NPM3-201ENST00000370110 SLKQ9H2G2 1235 aaPredicted RBP21.78■■□□□ 1.08
NPM3-201ENST00000370110 RIOX1Q9H6W3 641 aa21.78■■□□□ 1.08
NPM3-201ENST00000370110 hCG_1642624A0A1W2PR95 340 aa21.77■■□□□ 1.08
NPM3-201ENST00000370110 CPLX1O14810 134 aa21.77■■□□□ 1.08
NPM3-201ENST00000370110 CTAGE5O15320 804 aa21.77■■□□□ 1.08
NPM3-201ENST00000370110 TIMP1P01033 207 aa21.77■■□□□ 1.08
NPM3-201ENST00000370110 ASGR1P07306 291 aa21.77■■□□□ 1.08
NPM3-201ENST00000370110 DNAJB2P25686 324 aa21.77■■□□□ 1.08
NPM3-201ENST00000370110 CDC27P30260 824 aa21.77■■□□□ 1.08
NPM3-201ENST00000370110 CDK7P50613 346 aa21.77■■□□□ 1.08
NPM3-201ENST00000370110 CNTN2Q02246 1040 aa21.77■■□□□ 1.08
NPM3-201ENST00000370110 NSMFQ6X4W1 530 aa21.77■■□□□ 1.08
NPM3-201ENST00000370110 C16orf59Q7L2K0 433 aa21.77■■□□□ 1.08
NPM3-201ENST00000370110 ARMCX2Q7L311 632 aa21.77■■□□□ 1.08
NPM3-201ENST00000370110 USP38Q8NB14 1042 aa21.77■■□□□ 1.08
NPM3-201ENST00000370110 ZNF274Q96GC6 653 aaPredicted RBP21.77■■□□□ 1.08
NPM3-201ENST00000370110 SPZ1Q9BXG8 430 aa21.77■■□□□ 1.08
NPM3-201ENST00000370110 AMNQ9BXJ7 453 aa21.77■■□□□ 1.08
NPM3-201ENST00000370110 UPF3AQ9H1J1 476 aaKnown RBP21.77■■□□□ 1.08
NPM3-201ENST00000370110 TTC28Q96AY4 2481 aa21.77■■□□□ 1.07
NPM3-201ENST00000370110 TMEM265A0A087WTH1 108 aa21.76■■□□□ 1.07
NPM3-201ENST00000370110 PNMA6FA0A0J9YX94 578 aa21.76■■□□□ 1.07
NPM3-201ENST00000370110 CYTH3O43739 400 aa21.76■■□□□ 1.07
NPM3-201ENST00000370110 SMARCA1P28370 1054 aa21.76■■□□□ 1.07
NPM3-201ENST00000370110 AKAP17AQ02040 695 aaKnown RBP21.76■■□□□ 1.07
NPM3-201ENST00000370110 TRAF1Q13077 416 aa21.76■■□□□ 1.07
NPM3-201ENST00000370110 GLT1D1Q96MS3 346 aa21.76■■□□□ 1.07
NPM3-201ENST00000370110 ABHD16BQ9H3Z7 469 aa21.76■■□□□ 1.07
NPM3-201ENST00000370110 NCOA5Q9HCD5 579 aaKnown RBP21.76■■□□□ 1.07
NPM3-201ENST00000370110 TPCN1Q9ULQ1 816 aa21.76■■□□□ 1.07
NPM3-201ENST00000370110 DDX49Q9Y6V7 483 aaKnown RBP21.76■■□□□ 1.07
NPM3-201ENST00000370110 LRRC37A2A6NM11 1700 aa21.75■■□□□ 1.07
NPM3-201ENST00000370110 ST18O60284 1047 aa21.75■■□□□ 1.07
NPM3-201ENST00000370110 PTGS1P23219 599 aa21.75■■□□□ 1.07
NPM3-201ENST00000370110 EVCP57679 992 aa21.75■■□□□ 1.07
NPM3-201ENST00000370110 GJA9P57773 515 aa21.75■■□□□ 1.07
NPM3-201ENST00000370110 SLC35G1Q2M3R5 365 aa21.75■■□□□ 1.07
NPM3-201ENST00000370110 MUM1L1Q5H9M0 696 aa21.75■■□□□ 1.07
NPM3-201ENST00000370110 CPLX2Q6PUV4 134 aaKnown RBP21.75■■□□□ 1.07
NPM3-201ENST00000370110 KIF2CQ99661 725 aa21.75■■□□□ 1.07
NPM3-201ENST00000370110 MRPL11Q9Y3B7 192 aaKnown RBP21.75■■□□□ 1.07
NPM3-201ENST00000370110 PCDHA1Q9Y5I3 950 aa21.75■■□□□ 1.07
NPM3-201ENST00000370110 ASTN1O14525 1302 aa21.75■■□□□ 1.07
NPM3-201ENST00000370110 ELP1O95163 1332 aa21.75■■□□□ 1.07
NPM3-201ENST00000370110 ABCB11O95342 1321 aa21.75■■□□□ 1.07
NPM3-201ENST00000370110 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.74■■□□□ 1.07
NPM3-201ENST00000370110 PTPDC1A2A3K4 754 aa21.74■■□□□ 1.07
NPM3-201ENST00000370110 MFSD5Q6N075 450 aa21.74■■□□□ 1.07
NPM3-201ENST00000370110 FAM126BQ8IXS8 530 aa21.74■■□□□ 1.07
NPM3-201ENST00000370110 FAM133AQ8N9E0 248 aa21.74■■□□□ 1.07
NPM3-201ENST00000370110 V9GY48 417 aaPredicted RBP21.74■■□□□ 1.07
NPM3-201ENST00000370110 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.73■■□□□ 1.07
NPM3-201ENST00000370110 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms