RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 PCDHA4Q9UN74 947 aa19.63■□□□□ 0.73
UBE3D-203ENST00000369747 MYPNQ86TC9 1320 aa19.62■□□□□ 0.73
UBE3D-203ENST00000369747 PDHXO00330 501 aa19.62■□□□□ 0.73
UBE3D-203ENST00000369747 OPLAHO14841 1288 aa19.62■□□□□ 0.73
UBE3D-203ENST00000369747 CYP2C8P10632 490 aa19.62■□□□□ 0.73
UBE3D-203ENST00000369747 APLP1P51693 650 aa19.62■□□□□ 0.73
UBE3D-203ENST00000369747 HERVK_113P62684 666 aa19.62■□□□□ 0.73
UBE3D-203ENST00000369747 PAXIP1Q6ZW49 1069 aaPredicted RBP19.62■□□□□ 0.73
UBE3D-203ENST00000369747 CNNM3Q8NE01 707 aa19.62■□□□□ 0.73
UBE3D-203ENST00000369747 ZIC5Q96T25 663 aa19.62■□□□□ 0.73
UBE3D-203ENST00000369747 ZNF214Q9UL59 606 aaPredicted RBP19.62■□□□□ 0.73
UBE3D-203ENST00000369747 CTDP1Q9Y5B0 961 aaPredicted RBP19.62■□□□□ 0.73
UBE3D-203ENST00000369747 GOLGA6L6A8MZA4 724 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 CALML3P27482 149 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 MDM2Q00987 491 aaPredicted RBP19.61■□□□□ 0.73
UBE3D-203ENST00000369747 TTC38Q5R3I4 469 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 CYP4F22Q6NT55 531 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 BLIDQ8IZY5 108 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 CCDC102AQ96A19 550 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 HHIPL1Q96JK4 782 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 KCNF1Q9H3M0 494 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 C6orf50Q9HD87 102 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 RIPK3Q9Y572 518 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 ESYT2A0FGR8 921 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 BMP15O95972 392 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 TPM3P06753 285 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 FDX1P10109 184 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 CDC25BP30305 580 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 PABPC4Q13310 644 aaKnown RBP eCLIP19.61■□□□□ 0.73
UBE3D-203ENST00000369747 PPP1R18Q6NYC8 613 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 LBX2Q6XYB7 198 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 PIK3AP1Q6ZUJ8 805 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 USP49Q70CQ1 688 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 PSTPIP2Q9H939 334 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 CREBZFQ9NS37 354 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 HOMER2Q9NSB8 354 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 BTBD7Q9P203 1132 aa19.61■□□□□ 0.73
UBE3D-203ENST00000369747 TESPA1A2RU30 521 aaPredicted RBP19.6■□□□□ 0.73
UBE3D-203ENST00000369747 M0R2N6 131 aa19.6■□□□□ 0.73
UBE3D-203ENST00000369747 POLR2DO15514 142 aaKnown RBP19.6■□□□□ 0.73
UBE3D-203ENST00000369747 OSBPP22059 807 aa19.6■□□□□ 0.73
UBE3D-203ENST00000369747 ADCY7P51828 1080 aa19.6■□□□□ 0.73
UBE3D-203ENST00000369747 ZNF174Q15697 407 aa19.6■□□□□ 0.73
UBE3D-203ENST00000369747 ANKRD23Q86SG2 305 aa19.6■□□□□ 0.73
UBE3D-203ENST00000369747 FAM177A1Q8N128 213 aaPredicted RBP19.6■□□□□ 0.73
UBE3D-203ENST00000369747 RIC8AQ9NPQ8 531 aa19.6■□□□□ 0.73
UBE3D-203ENST00000369747 A0A0G2JMZ2 1700 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 IGF2BP3O00425 579 aaKnown RBP eCLIP19.59■□□□□ 0.73
UBE3D-203ENST00000369747 FOXN1O15353 648 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 OFD1O75665 1012 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 ALAS1P13196 640 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 GNA11P29992 359 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 TRAPPC10P48553 1259 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 PLS1Q14651 629 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 ISM2Q6H9L7 571 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 SNRNP48Q6IEG0 339 aaKnown RBP19.59■□□□□ 0.73
UBE3D-203ENST00000369747 USP17L6PQ6QN14 398 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 DAGLBQ8NCG7 672 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 TBC1D5Q92609 795 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 TXNRD2Q9NNW7 524 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 MANSC4A6NHS7 340 aaPredicted RBP19.59■□□□□ 0.73
UBE3D-203ENST00000369747 ATP2C1P98194 919 aaPredicted RBP19.59■□□□□ 0.73
UBE3D-203ENST00000369747 UBE2SQ16763 222 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 GALNT17Q6IS24 598 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 CUL5Q93034 780 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 FERMT2Q96AC1 680 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 MRFAP1L1Q96HT8 127 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 PAGR1Q9BTK6 254 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 TMEM260Q9NX78 707 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 BIN2Q9UBW5 565 aaPredicted RBP19.59■□□□□ 0.73
UBE3D-203ENST00000369747 SERTAD1Q9UHV2 236 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 PCDHA6Q9UN73 950 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 PCDHA8Q9Y5H6 950 aa19.59■□□□□ 0.73
UBE3D-203ENST00000369747 ATP2A1O14983 1001 aa19.58■□□□□ 0.72
UBE3D-203ENST00000369747 HTRA3P83110 453 aa19.58■□□□□ 0.72
UBE3D-203ENST00000369747 MUM1L1Q5H9M0 696 aa19.58■□□□□ 0.72
UBE3D-203ENST00000369747 DRC7Q8IY82 874 aa19.58■□□□□ 0.72
UBE3D-203ENST00000369747 REXO1Q8N1G1 1221 aaKnown RBP19.58■□□□□ 0.72
UBE3D-203ENST00000369747 TEX13BQ9BXU2 312 aa19.58■□□□□ 0.72
UBE3D-203ENST00000369747 RBPJLQ9UBG7 517 aa19.58■□□□□ 0.72
UBE3D-203ENST00000369747 NRBP1Q9UHY1 535 aa19.58■□□□□ 0.72
UBE3D-203ENST00000369747 SLC45A1Q9Y2W3 748 aa19.58■□□□□ 0.72
UBE3D-203ENST00000369747 PCDHA5Q9Y5H7 936 aa19.58■□□□□ 0.72
UBE3D-203ENST00000369747 ABCB11O95342 1321 aa19.57■□□□□ 0.72
UBE3D-203ENST00000369747 RASSF10A6NK89 507 aa19.57■□□□□ 0.72
UBE3D-203ENST00000369747 NFIBO00712 420 aa19.57■□□□□ 0.72
UBE3D-203ENST00000369747 MEIS2O14770 477 aa19.57■□□□□ 0.72
UBE3D-203ENST00000369747 ACTN4O43707 911 aaKnown RBP19.57■□□□□ 0.72
UBE3D-203ENST00000369747 CNMDO75829 334 aa19.57■□□□□ 0.72
UBE3D-203ENST00000369747 PTGS1P23219 599 aa19.57■□□□□ 0.72
UBE3D-203ENST00000369747 STAT3P40763 770 aa19.57■□□□□ 0.72
UBE3D-203ENST00000369747 MRPL12P52815 198 aaKnown RBP19.57■□□□□ 0.72
UBE3D-203ENST00000369747 OAZ1P54368 228 aa19.57■□□□□ 0.72
UBE3D-203ENST00000369747 PTGDRQ13258 359 aa19.57■□□□□ 0.72
UBE3D-203ENST00000369747 NCAPHQ15003 741 aa19.57■□□□□ 0.72
UBE3D-203ENST00000369747 DEFB115Q30KQ5 88 aa19.57■□□□□ 0.72
UBE3D-203ENST00000369747 JAKMIP3Q5VZ66 844 aa19.57■□□□□ 0.72
UBE3D-203ENST00000369747 SMCR8Q8TEV9 937 aaPredicted RBP19.57■□□□□ 0.72
UBE3D-203ENST00000369747 CLEC4DQ8WXI8 215 aa19.57■□□□□ 0.72
UBE3D-203ENST00000369747 PNMA3Q9UL41 463 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms