RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 C3orf67Q6ZVT6 689 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 SULF1Q8IWU6 871 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 ADGRF4Q8IZF3 695 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 ENGASEQ8NFI3 743 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 KIFAP3Q92845 792 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 CDHR1Q96JP9 859 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 DRC1Q96MC2 740 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 NOX5Q96PH1 765 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 NACC1Q96RE7 527 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 TUBE1Q9UJT0 475 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 ZNF215Q9UL58 517 aaPredicted RBP5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 FAM205AQ6ZU69 1335 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 A0A087WWV3 80 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 SLC26A4O43511 780 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 N4BP1O75113 896 aaKnown RBP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 FDX1P10109 184 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 SRGNP10124 158 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 BCRP11274 1271 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 FAM193AP78312 1265 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 SP4Q02446 784 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 KLHL30Q0D2K2 578 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 ST3GAL1Q11201 340 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 ADAM9Q13443 819 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 NTRK3Q16288 839 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 MAN2A1Q16706 1144 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 PPP4R3CPQ6ZMV5 832 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 UNC13DQ70J99 1090 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 DCPSQ96C86 337 aaKnown RBP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 RPGRIP1Q96KN7 1286 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 PANX2Q96RD6 677 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 FNBP1Q96RU3 617 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 SLF1Q9BQI6 1058 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 ZNF577Q9BSK1 485 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 FAM207AQ9NSI2 230 aaPredicted RBP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 SAMSN1Q9NSI8 373 aaKnown RBP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 MYO1AQ9UBC5 1043 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 FEM1BQ9UK73 627 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 PCDHA6Q9UN73 950 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 PCDHA8Q9Y5H6 950 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 PHRF1Q9P1Y6 1649 aaKnown RBP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 TESPA1A2RU30 521 aaPredicted RBP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 USP17L10C9JJH3 530 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 EN1Q05925 392 aaPredicted RBP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 NCBP1Q09161 790 aaKnown RBP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 PRPF4BQ13523 1007 aaKnown RBP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 HLTFQ14527 1009 aaKnown RBP eCLIP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 PDIA5Q14554 519 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 MCM6Q14566 821 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 QRICH1Q2TAL8 776 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 WDR44Q5JSH3 913 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 ARHGAP27Q6ZUM4 889 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 RRAGAQ7L523 313 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 APBB1IPQ7Z5R6 666 aaPredicted RBP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 CDAN1Q8IWY9 1227 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 SMYD4Q8IYR2 804 aaPredicted RBP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 DAGLBQ8NCG7 672 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 FAM163AQ96GL9 167 aaPredicted RBP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 ZMYND12Q9H0C1 365 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 AZI2Q9H6S1 392 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 POLLQ9UGP5 575 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 ZNRF3Q9ULT6 936 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 MACROD2A1Z1Q3 448 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 ANKRD62A6NC57 917 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 PLSCR1O15162 318 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 PLA2G4BP0C869 781 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 TNFAIP3P21580 790 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 CHMP4BP1P59074 171 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 KCNB1Q14721 858 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 IQCB1Q15051 598 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 SLC15A2Q16348 729 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 KIAA0753Q2KHM9 967 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 GBP6Q6ZN66 633 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 RBM43Q6ZSC3 357 aaKnown RBP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 ADGRA1Q86SQ6 560 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 TXNRD3Q86VQ6 643 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 METTL16Q86W50 562 aaKnown RBP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 COL23A1Q86Y22 540 aaPredicted RBP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 RTFDC1Q9BY42 306 aaPredicted RBP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 IFIH1Q9BYX4 1025 aaKnown RBP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 EPN1Q9Y6I3 576 aaPredicted RBP5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 ABCB11O95342 1321 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 DISP2A7MBM2 1401 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 SCN11AQ9UI33 1791 aa5.87□□□□□ -1.47
SMNDC1-202ENST00000369603 POLRMTO00411 1230 aaKnown RBP5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 NOP56O00567 594 aaKnown RBP5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 PDHBP11177 359 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 ATP1A3P13637 1013 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 CHRNA5P30532 468 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 CASP14P31944 242 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 ABCD1P33897 745 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 TNNC1P63316 161 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 CYP4A11Q02928 519 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 CUL4BQ13620 913 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 TCP11X2Q5H9J9 407 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 KCPQ6ZWJ8 1503 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 DHX40Q8IX18 779 aaKnown RBP5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 PLCD3Q8N3E9 789 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 ATP6V0A1Q93050 837 aa5.86□□□□□ -1.47
SMNDC1-202ENST00000369603 VTI1AQ96AJ9 217 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms