RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 GPAT2Q6NUI2 795 aa27.07■■□□□ 1.92
SNX3-203ENST00000368979 POTEEQ6S8J3 1075 aa27.07■■□□□ 1.92
SNX3-203ENST00000368979 EPSTI1Q96J88 318 aa27.07■■□□□ 1.92
SNX3-203ENST00000368979 HOMER2Q9NSB8 354 aa27.07■■□□□ 1.92
SNX3-203ENST00000368979 RNF146Q9NTX7 359 aa27.07■■□□□ 1.92
SNX3-203ENST00000368979 CTAGE5O15320 804 aa27.06■■□□□ 1.92
SNX3-203ENST00000368979 CIITAP33076 1130 aa27.06■■□□□ 1.92
SNX3-203ENST00000368979 CALCRLQ16602 461 aa27.06■■□□□ 1.92
SNX3-203ENST00000368979 TKFCQ3LXA3 575 aa27.06■■□□□ 1.92
SNX3-203ENST00000368979 GAS2L3Q86XJ1 694 aa27.06■■□□□ 1.92
SNX3-203ENST00000368979 MB21D1Q8N884 522 aa27.06■■□□□ 1.92
SNX3-203ENST00000368979 ASCC2Q9H1I8 757 aaPredicted RBP27.06■■□□□ 1.92
SNX3-203ENST00000368979 EHMT1Q9H9B1 1298 aa27.06■■□□□ 1.92
SNX3-203ENST00000368979 IRX3P78415 501 aaPredicted RBP27.06■■□□□ 1.92
SNX3-203ENST00000368979 COL20A1Q9P218 1284 aa27.06■■□□□ 1.92
SNX3-203ENST00000368979 RPTORQ8N122 1335 aa27.05■■□□□ 1.92
SNX3-203ENST00000368979 PABPC4Q13310 644 aaKnown RBP eCLIP27.05■■□□□ 1.92
SNX3-203ENST00000368979 STAT3P40763 770 aa27.04■■□□□ 1.92
SNX3-203ENST00000368979 Q4G0T1 1027 aa27.04■■□□□ 1.92
SNX3-203ENST00000368979 SYTL5Q8TDW5 730 aaPredicted RBP27.04■■□□□ 1.92
SNX3-203ENST00000368979 FUCA2Q9BTY2 467 aa27.04■■□□□ 1.92
SNX3-203ENST00000368979 FRMPD4Q14CM0 1322 aa27.03■■□□□ 1.92
SNX3-203ENST00000368979 FSD2A1L4K1 749 aa27.03■■□□□ 1.92
SNX3-203ENST00000368979 MS4A4AQ96JQ5 239 aa27.03■■□□□ 1.92
SNX3-203ENST00000368979 AK8Q96MA6 479 aa27.03■■□□□ 1.92
SNX3-203ENST00000368979 KCNMB3Q9NPA1 279 aa27.03■■□□□ 1.92
SNX3-203ENST00000368979 BTBD7Q9P203 1132 aa27.03■■□□□ 1.92
SNX3-203ENST00000368979 A0A087X0B3 334 aa27.02■■□□□ 1.92
SNX3-203ENST00000368979 FAM86B1E9PN63 330 aa27.02■■□□□ 1.92
SNX3-203ENST00000368979 POLR2DO15514 142 aaKnown RBP27.02■■□□□ 1.92
SNX3-203ENST00000368979 FAM86B2P0C5J1 330 aa27.02■■□□□ 1.92
SNX3-203ENST00000368979 FXR2P51116 673 aaKnown RBP eCLIP27.02■■□□□ 1.92
SNX3-203ENST00000368979 GTF2A2P52657 109 aa27.02■■□□□ 1.92
SNX3-203ENST00000368979 HERVK_113P62684 666 aa27.02■■□□□ 1.92
SNX3-203ENST00000368979 RPS6P62753 249 aaKnown RBP27.02■■□□□ 1.92
SNX3-203ENST00000368979 LONRF3Q496Y0 759 aa27.02■■□□□ 1.92
SNX3-203ENST00000368979 SLC30A10Q6XR72 485 aa27.02■■□□□ 1.92
SNX3-203ENST00000368979 KRBA2Q6ZNG9 492 aa27.02■■□□□ 1.92
SNX3-203ENST00000368979 CKAP2LQ8IYA6 745 aa27.02■■□□□ 1.92
SNX3-203ENST00000368979 HAS1Q92839 578 aa27.02■■□□□ 1.92
SNX3-203ENST00000368979 LENG9Q96B70 501 aa27.02■■□□□ 1.92
SNX3-203ENST00000368979 MAF1Q9H063 256 aa27.02■■□□□ 1.92
SNX3-203ENST00000368979 CETPP11597 493 aa27.01■■□□□ 1.91
SNX3-203ENST00000368979 OSBPP22059 807 aa27.01■■□□□ 1.91
SNX3-203ENST00000368979 TXKP42681 527 aa27.01■■□□□ 1.91
SNX3-203ENST00000368979 RNF207Q6ZRF8 634 aa27.01■■□□□ 1.91
SNX3-203ENST00000368979 ELOA2Q8IYF1 753 aaPredicted RBP27.01■■□□□ 1.91
SNX3-203ENST00000368979 IGSF22Q8N9C0 903 aa27.01■■□□□ 1.91
SNX3-203ENST00000368979 SDF4Q9BRK5 362 aa27.01■■□□□ 1.91
SNX3-203ENST00000368979 ACAD9Q9H845 621 aa27.01■■□□□ 1.91
SNX3-203ENST00000368979 RABGAP1Q9Y3P9 1069 aa27.01■■□□□ 1.91
SNX3-203ENST00000368979 ZBTB48P10074 688 aaPredicted RBP27■■□□□ 1.91
SNX3-203ENST00000368979 PLS1Q14651 629 aa27■■□□□ 1.91
SNX3-203ENST00000368979 SPRYD7Q5W111 196 aa27■■□□□ 1.91
SNX3-203ENST00000368979 TBX3O15119 743 aa27■■□□□ 1.91
SNX3-203ENST00000368979 ACTN4O43707 911 aaKnown RBP27■■□□□ 1.91
SNX3-203ENST00000368979 CNMDO75829 334 aa27■■□□□ 1.91
SNX3-203ENST00000368979 TECP42680 631 aa27■■□□□ 1.91
SNX3-203ENST00000368979 NSMFQ6X4W1 530 aa27■■□□□ 1.91
SNX3-203ENST00000368979 RIOX2Q8IUF8 465 aa27■■□□□ 1.91
SNX3-203ENST00000368979 PDILTQ8N807 584 aa27■■□□□ 1.91
SNX3-203ENST00000368979 ETNPPLQ8TBG4 499 aa27■■□□□ 1.91
SNX3-203ENST00000368979 CCSER1Q9C0I3 900 aa27■■□□□ 1.91
SNX3-203ENST00000368979 PASKQ96RG2 1323 aa26.99■■□□□ 1.91
SNX3-203ENST00000368979 IGLV3-22A0A075B6J6 115 aa26.99■■□□□ 1.91
SNX3-203ENST00000368979 GOLGA6L3A6NEY3 463 aa26.99■■□□□ 1.91
SNX3-203ENST00000368979 PP2D1A8MPX8 630 aa26.99■■□□□ 1.91
SNX3-203ENST00000368979 TXLNAP40222 546 aa26.99■■□□□ 1.91
SNX3-203ENST00000368979 TMEM266Q2M3C6 531 aa26.99■■□□□ 1.91
SNX3-203ENST00000368979 PRR16Q569H4 304 aa26.99■■□□□ 1.91
SNX3-203ENST00000368979 CNNM3Q8NE01 707 aa26.99■■□□□ 1.91
SNX3-203ENST00000368979 CHST13Q8NET6 341 aa26.99■■□□□ 1.91
SNX3-203ENST00000368979 PYM1Q9BRP8 204 aaKnown RBP26.99■■□□□ 1.91
SNX3-203ENST00000368979 TSPY26PQ9H489 355 aa26.99■■□□□ 1.91
SNX3-203ENST00000368979 SERTAD1Q9UHV2 236 aa26.99■■□□□ 1.91
SNX3-203ENST00000368979 SLC45A1Q9Y2W3 748 aa26.99■■□□□ 1.91
SNX3-203ENST00000368979 CDC25AP30304 524 aa26.98■■□□□ 1.91
SNX3-203ENST00000368979 ZNF76P36508 570 aa26.98■■□□□ 1.91
SNX3-203ENST00000368979 UBXN2AP68543 259 aa26.98■■□□□ 1.91
SNX3-203ENST00000368979 BAATQ14032 418 aaPredicted RBP26.98■■□□□ 1.91
SNX3-203ENST00000368979 PANK2Q9BZ23 570 aa26.98■■□□□ 1.91
SNX3-203ENST00000368979 SPATC1LQ9H0A9 340 aa26.98■■□□□ 1.91
SNX3-203ENST00000368979 TTC12Q9H892 705 aaPredicted RBP26.98■■□□□ 1.91
SNX3-203ENST00000368979 GPBP1L1Q9HC44 474 aaPredicted RBP26.98■■□□□ 1.91
SNX3-203ENST00000368979 USP25Q9UHP3 1055 aa26.98■■□□□ 1.91
SNX3-203ENST00000368979 CCL15-CCL14A0A0B4J2E2 113 aa26.97■■□□□ 1.91
SNX3-203ENST00000368979 HUNKP57058 714 aa26.97■■□□□ 1.91
SNX3-203ENST00000368979 MKRN3Q13064 507 aaKnown RBP26.97■■□□□ 1.91
SNX3-203ENST00000368979 PDIA5Q14554 519 aa26.97■■□□□ 1.91
SNX3-203ENST00000368979 E2F4Q16254 413 aa26.97■■□□□ 1.91
SNX3-203ENST00000368979 CCL15Q16663 113 aa26.97■■□□□ 1.91
SNX3-203ENST00000368979 SLFN12Q8IYM2 578 aa26.97■■□□□ 1.91
SNX3-203ENST00000368979 BRI3BPQ8WY22 251 aa26.97■■□□□ 1.91
SNX3-203ENST00000368979 DHX58Q96C10 678 aa26.97■■□□□ 1.91
SNX3-203ENST00000368979 TAAR1Q96RJ0 339 aa26.97■■□□□ 1.91
SNX3-203ENST00000368979 PNMA3Q9UL41 463 aa26.97■■□□□ 1.91
SNX3-203ENST00000368979 PEX10O60683 326 aa26.96■■□□□ 1.91
SNX3-203ENST00000368979 UBA7P41226 1012 aa26.96■■□□□ 1.91
SNX3-203ENST00000368979 CYP2W1Q8TAV3 490 aa26.96■■□□□ 1.91
SNX3-203ENST00000368979 RAB34Q9BZG1 259 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms