RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 KIAA1217Q5T5P2 1943 aa21.33■■□□□ 1.01
CHTOP-202ENST00000368687 RBM47A0AV96 593 aaKnown RBP21.33■■□□□ 1.01
CHTOP-202ENST00000368687 EVI5O60447 810 aa21.33■■□□□ 1.01
CHTOP-202ENST00000368687 ADAMTS4O75173 837 aa21.33■■□□□ 1.01
CHTOP-202ENST00000368687 PGK1P00558 417 aa21.33■■□□□ 1.01
CHTOP-202ENST00000368687 GJA9P57773 515 aa21.33■■□□□ 1.01
CHTOP-202ENST00000368687 DUSP28Q4G0W2 176 aa21.33■■□□□ 1.01
CHTOP-202ENST00000368687 GJC2Q5T442 439 aaPredicted RBP21.33■■□□□ 1.01
CHTOP-202ENST00000368687 TAPT1Q6NXT6 567 aa21.33■■□□□ 1.01
CHTOP-202ENST00000368687 CMTR1Q8N1G2 835 aaKnown RBP21.33■■□□□ 1.01
CHTOP-202ENST00000368687 CCDC82Q8N4S0 544 aa21.33■■□□□ 1.01
CHTOP-202ENST00000368687 TBC1D5Q92609 795 aa21.33■■□□□ 1.01
CHTOP-202ENST00000368687 ZNF274Q96GC6 653 aaPredicted RBP21.33■■□□□ 1.01
CHTOP-202ENST00000368687 TAAR1Q96RJ0 339 aa21.33■■□□□ 1.01
CHTOP-202ENST00000368687 UPF3BQ9BZI7 483 aaKnown RBP21.33■■□□□ 1.01
CHTOP-202ENST00000368687 AP5M1Q9H0R1 490 aa21.33■■□□□ 1.01
CHTOP-202ENST00000368687 ALDH8A1Q9H2A2 487 aaPredicted RBP21.33■■□□□ 1.01
CHTOP-202ENST00000368687 PHF24Q9UPV7 400 aa21.33■■□□□ 1.01
CHTOP-202ENST00000368687 RANBP2P49792 3224 aaKnown RBP21.33■■□□□ 1
CHTOP-202ENST00000368687 ZEB2O60315 1214 aa21.32■■□□□ 1
CHTOP-202ENST00000368687 EIF3JO75822 258 aaKnown RBP21.32■■□□□ 1
CHTOP-202ENST00000368687 MYCNP04198 464 aaPredicted RBP21.32■■□□□ 1
CHTOP-202ENST00000368687 C6orf222P0C671 652 aaPredicted RBP21.32■■□□□ 1
CHTOP-202ENST00000368687 ADCYAP1R1P41586 468 aa21.32■■□□□ 1
CHTOP-202ENST00000368687 FUT2Q10981 343 aa21.32■■□□□ 1
CHTOP-202ENST00000368687 TTLL4Q14679 1199 aa21.32■■□□□ 1
CHTOP-202ENST00000368687 EEPD1Q7L9B9 569 aa21.32■■□□□ 1
CHTOP-202ENST00000368687 HEATR3Q7Z4Q2 680 aa21.32■■□□□ 1
CHTOP-202ENST00000368687 TLK2Q86UE8 772 aa21.32■■□□□ 1
CHTOP-202ENST00000368687 SMARCC2Q8TAQ2 1214 aa21.32■■□□□ 1
CHTOP-202ENST00000368687 WDR11Q9BZH6 1224 aa21.32■■□□□ 1
CHTOP-202ENST00000368687 SENP6Q9GZR1 1112 aaPredicted RBP21.32■■□□□ 1
CHTOP-202ENST00000368687 PSTPIP2Q9H939 334 aa21.32■■□□□ 1
CHTOP-202ENST00000368687 COL20A1Q9P218 1284 aa21.32■■□□□ 1
CHTOP-202ENST00000368687 GNEQ9Y223 722 aaKnown RBP21.32■■□□□ 1
CHTOP-202ENST00000368687 STAM2O75886 525 aa21.31■■□□□ 1
CHTOP-202ENST00000368687 NR3C2P08235 984 aa21.31■■□□□ 1
CHTOP-202ENST00000368687 PDIA3P30101 505 aaKnown RBP21.31■■□□□ 1
CHTOP-202ENST00000368687 CDC27P30260 824 aa21.31■■□□□ 1
CHTOP-202ENST00000368687 AKAP17AQ02040 695 aaKnown RBP21.31■■□□□ 1
CHTOP-202ENST00000368687 TOB2Q14106 344 aaPredicted RBP21.31■■□□□ 1
CHTOP-202ENST00000368687 BRDTQ58F21 947 aaPredicted RBP21.31■■□□□ 1
CHTOP-202ENST00000368687 KCNV1Q6PIU1 500 aa21.31■■□□□ 1
CHTOP-202ENST00000368687 CPLX2Q6PUV4 134 aaKnown RBP21.31■■□□□ 1
CHTOP-202ENST00000368687 KLHDC9Q8NEP7 349 aa21.31■■□□□ 1
CHTOP-202ENST00000368687 CCDC12Q8WUD4 166 aaPredicted RBP21.31■■□□□ 1
CHTOP-202ENST00000368687 PDCD2LQ9BRP1 358 aa21.31■■□□□ 1
CHTOP-202ENST00000368687 FAM217BQ9NTX9 383 aaPredicted RBP21.31■■□□□ 1
CHTOP-202ENST00000368687 DNAH12Q6ZR08 3092 aa21.31■■□□□ 1
CHTOP-202ENST00000368687 FRMPD4Q14CM0 1322 aa21.3■■□□□ 1
CHTOP-202ENST00000368687 ALPK3Q96L96 1907 aa21.3■■□□□ 1
CHTOP-202ENST00000368687 EIF2AK2P19525 551 aaKnown RBP21.3■■□□□ 1
CHTOP-202ENST00000368687 CCND2P30279 289 aa21.3■■□□□ 1
CHTOP-202ENST00000368687 HOXA13P31271 388 aaPredicted RBP21.3■■□□□ 1
CHTOP-202ENST00000368687 C8orf34Q49A92 452 aa21.3■■□□□ 1
CHTOP-202ENST00000368687 XRRA1Q6P2D8 792 aa21.3■■□□□ 1
CHTOP-202ENST00000368687 EHMT1Q9H9B1 1298 aa21.3■■□□□ 1
CHTOP-202ENST00000368687 V9GY48 417 aaPredicted RBP21.3■■□□□ 1
CHTOP-202ENST00000368687 CABYRO75952 493 aa21.29■■□□□ 1
CHTOP-202ENST00000368687 SLC34A2O95436 690 aa21.29■■□□□ 1
CHTOP-202ENST00000368687 SMPD1P17405 629 aa21.29■■□□□ 1
CHTOP-202ENST00000368687 ADD1P35611 737 aaKnown RBP21.29■■□□□ 1
CHTOP-202ENST00000368687 HABP4Q5JVS0 413 aaKnown RBP21.29■■□□□ 1
CHTOP-202ENST00000368687 GNASQ5JWF2 1037 aa21.29■■□□□ 1
CHTOP-202ENST00000368687 C1orf53Q5VUE5 145 aa21.29■■□□□ 1
CHTOP-202ENST00000368687 TRIM22Q8IYM9 498 aa21.29■■□□□ 1
CHTOP-202ENST00000368687 LENG1Q96BZ8 264 aaPredicted RBP21.29■■□□□ 1
CHTOP-202ENST00000368687 RNF26Q9BY78 433 aaPredicted RBP21.29■■□□□ 1
CHTOP-202ENST00000368687 UPF2Q9HAU5 1272 aaKnown RBP21.29■■□□□ 1
CHTOP-202ENST00000368687 PDGFCQ9NRA1 345 aa21.29■■□□□ 1
CHTOP-202ENST00000368687 BARHL2Q9NY43 387 aa21.29■■□□□ 1
CHTOP-202ENST00000368687 COLQQ9Y215 455 aaPredicted RBP21.29■■□□□ 1
CHTOP-202ENST00000368687 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.28■■□□□ 1
CHTOP-202ENST00000368687 CPLX1O14810 134 aa21.28■■□□□ 1
CHTOP-202ENST00000368687 ADCY6O43306 1168 aa21.28■■□□□ 1
CHTOP-202ENST00000368687 PRPF3O43395 683 aaKnown RBP21.28■■□□□ 1
CHTOP-202ENST00000368687 SCG2P13521 617 aa21.28■■□□□ 1
CHTOP-202ENST00000368687 IFNAR1P17181 557 aa21.28■■□□□ 1
CHTOP-202ENST00000368687 CPT1AP50416 773 aa21.28■■□□□ 1
CHTOP-202ENST00000368687 ACLYP53396 1101 aa21.28■■□□□ 1
CHTOP-202ENST00000368687 NAPAP54920 295 aa21.28■■□□□ 1
CHTOP-202ENST00000368687 PGM5Q15124 567 aa21.28■■□□□ 1
CHTOP-202ENST00000368687 FSCN1Q16658 493 aaKnown RBP21.28■■□□□ 1
CHTOP-202ENST00000368687 PFKFB3Q16875 520 aaPredicted RBP21.28■■□□□ 1
CHTOP-202ENST00000368687 GNPTABQ3T906 1256 aa21.28■■□□□ 1
CHTOP-202ENST00000368687 WWC2Q6AWC2 1192 aa21.28■■□□□ 1
CHTOP-202ENST00000368687 VSIG10LQ86VR7 867 aa21.28■■□□□ 1
CHTOP-202ENST00000368687 FCHSD1Q86WN1 690 aa21.28■■□□□ 1
CHTOP-202ENST00000368687 IL27Q8NEV9 243 aa21.28■■□□□ 1
CHTOP-202ENST00000368687 GLT1D1Q96MS3 346 aa21.28■■□□□ 1
CHTOP-202ENST00000368687 SEZ6LQ9BYH1 1024 aa21.28■■□□□ 1
CHTOP-202ENST00000368687 ELP1O95163 1332 aa21.28■■□□□ 1
CHTOP-202ENST00000368687 A0A1W2PQ45 241 aaPredicted RBP21.27■■□□□ 1
CHTOP-202ENST00000368687 A0A1W2PQY0 241 aa21.27■■□□□ 1
CHTOP-202ENST00000368687 SPDYE3A6NKU9 549 aa21.27■■□□□ 1
CHTOP-202ENST00000368687 MEIS2O14770 477 aa21.27■■□□□ 1
CHTOP-202ENST00000368687 CDKL5O76039 1030 aa21.27■■□□□ 1
CHTOP-202ENST00000368687 TXNP10599 105 aaKnown RBP21.27■■□□□ 1
CHTOP-202ENST00000368687 SNX17Q15036 470 aa21.27■■□□□ 1
CHTOP-202ENST00000368687 KCNA10Q16322 511 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms