RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 ST13P50502 369 aaKnown RBP10.19□□□□□ -0.78
TPM3-213ENST00000368545 CENPCQ03188 943 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 ME3Q16798 604 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 SPRYD7Q5W111 196 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 MB21D2Q8IYB1 491 aaPredicted RBP10.19□□□□□ -0.78
TPM3-213ENST00000368545 DEFB123Q8N688 67 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 STAG1Q8WVM7 1258 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 TCEANC2Q96MN5 208 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 RNF41Q9H4P4 317 aaPredicted RBP10.19□□□□□ -0.78
TPM3-213ENST00000368545 ATP8A2Q9NTI2 1148 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 MTMR10Q9NXD2 777 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 GIPC1O14908 333 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 LARGE1O95461 756 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 BAG3O95817 575 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 PCP11498 1178 aaKnown RBP10.19□□□□□ -0.78
TPM3-213ENST00000368545 CLN3Q13286 438 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 MFSD14BQ5SR56 506 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 TBC1D10CQ8IV04 446 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 CCDC83Q8IWF9 413 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 GBP4Q96PP9 640 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 KRT23Q9C075 422 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 ANAPC4Q9UJX5 808 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 SMC3Q9UQE7 1217 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 PSME4Q14997 1843 aa10.19□□□□□ -0.78
TPM3-213ENST00000368545 MROH7-TTC4A0A0A0MT08 1334 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 PRC1O43663 620 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 PRKAB2O43741 272 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 PTPN5P54829 565 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 COL9A3Q14050 684 aaPredicted RBP10.18□□□□□ -0.78
TPM3-213ENST00000368545 AKNAD1Q5T1N1 836 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 PODNQ7Z5L7 613 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 CKAP2LQ8IYA6 745 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 BRF1Q92994 677 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 AATFQ9NY61 560 aaKnown RBP eCLIP10.18□□□□□ -0.78
TPM3-213ENST00000368545 GGA3Q9NZ52 723 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 JAG2Q9Y219 1238 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 RNF223E7ERA6 249 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 MICAL2O94851 1124 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 HSD3B2P26439 372 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 HOXD10P28358 340 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 NT5C2P49902 561 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 DYNLL1P63167 89 aaKnown RBP10.18□□□□□ -0.78
TPM3-213ENST00000368545 PPARAQ07869 468 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 SERINC3Q13530 473 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 CLEC17AQ6ZS10 378 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 MFSD6Q6ZSS7 791 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 RASGRP4Q8TDF6 673 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 SDR42E1Q8WUS8 393 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 TNPO1Q92973 898 aaKnown RBP10.18□□□□□ -0.78
TPM3-213ENST00000368545 GTF3C6Q969F1 213 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 MRFAP1L1Q96HT8 127 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 MTA3Q9BTC8 594 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 KBTBD4Q9NVX7 518 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 ARPP21Q9UBL0 812 aaPredicted RBP10.18□□□□□ -0.78
TPM3-213ENST00000368545 PPP2R3BQ9Y5P8 575 aa10.18□□□□□ -0.78
TPM3-213ENST00000368545 DDX60LQ5H9U9 1706 aaKnown RBP10.17□□□□□ -0.78
TPM3-213ENST00000368545 PTMSP20962 102 aa10.17□□□□□ -0.78
TPM3-213ENST00000368545 TXLNAP40222 546 aa10.17□□□□□ -0.78
TPM3-213ENST00000368545 EVCP57679 992 aa10.17□□□□□ -0.78
TPM3-213ENST00000368545 NR5A1Q13285 461 aa10.17□□□□□ -0.78
TPM3-213ENST00000368545 MAP3K11Q16584 847 aa10.17□□□□□ -0.78
TPM3-213ENST00000368545 NXPE4Q6UWF7 544 aa10.17□□□□□ -0.78
TPM3-213ENST00000368545 OLFM4Q6UX06 510 aa10.17□□□□□ -0.78
TPM3-213ENST00000368545 ZNF274Q96GC6 653 aaPredicted RBP10.17□□□□□ -0.78
TPM3-213ENST00000368545 FAM163AQ96GL9 167 aaPredicted RBP10.17□□□□□ -0.78
TPM3-213ENST00000368545 TMEM87BQ96K49 555 aa10.17□□□□□ -0.78
TPM3-213ENST00000368545 NEDD4P46934 1319 aa10.17□□□□□ -0.78
TPM3-213ENST00000368545 hCG_2014768A0A024R1R8 64 aa10.16□□□□□ -0.78
TPM3-213ENST00000368545 SIAH2O43255 324 aa10.16□□□□□ -0.78
TPM3-213ENST00000368545 RAD17O75943 681 aa10.16□□□□□ -0.78
TPM3-213ENST00000368545 RPLP1P05386 114 aaKnown RBP10.16□□□□□ -0.78
TPM3-213ENST00000368545 VIL1P09327 827 aaKnown RBP10.16□□□□□ -0.78
TPM3-213ENST00000368545 FKBP1AP62942 108 aaKnown RBP10.16□□□□□ -0.78
TPM3-213ENST00000368545 UBE2Q1Q7Z7E8 422 aa10.16□□□□□ -0.78
TPM3-213ENST00000368545 LLPHQ9BRT6 129 aaKnown RBP10.16□□□□□ -0.78
TPM3-213ENST00000368545 LRRC2Q9BYS8 371 aa10.16□□□□□ -0.78
TPM3-213ENST00000368545 GAKO14976 1311 aa10.16□□□□□ -0.78
TPM3-213ENST00000368545 PFKFB2O60825 505 aa10.16□□□□□ -0.78
TPM3-213ENST00000368545 ADH1AP07327 375 aa10.16□□□□□ -0.78
TPM3-213ENST00000368545 SLC3A2P08195 630 aaKnown RBP10.16□□□□□ -0.78
TPM3-213ENST00000368545 XRCC5P13010 732 aaKnown RBP10.16□□□□□ -0.78
TPM3-213ENST00000368545 PDCP20941 246 aa10.16□□□□□ -0.78
TPM3-213ENST00000368545 ST3GAL1Q11201 340 aa10.16□□□□□ -0.78
TPM3-213ENST00000368545 SART3Q15020 963 aaKnown RBP10.16□□□□□ -0.78
TPM3-213ENST00000368545 TBC1D10BQ4KMP7 808 aaPredicted RBP10.16□□□□□ -0.78
TPM3-213ENST00000368545 SBK1Q52WX2 424 aa10.16□□□□□ -0.78
TPM3-213ENST00000368545 C1orf53Q5VUE5 145 aa10.16□□□□□ -0.78
TPM3-213ENST00000368545 APOBEC3FQ8IUX4 373 aaKnown RBP10.16□□□□□ -0.78
TPM3-213ENST00000368545 AMOTL1Q8IY63 956 aa10.16□□□□□ -0.78
TPM3-213ENST00000368545 NPHS2Q9NP85 383 aa10.16□□□□□ -0.78
TPM3-213ENST00000368545 DCP1AQ9NPI6 582 aaPredicted RBP10.16□□□□□ -0.78
TPM3-213ENST00000368545 FAM13BQ9NYF5 915 aa10.16□□□□□ -0.78
TPM3-213ENST00000368545 ANGEL1Q9UNK9 670 aaKnown RBP10.16□□□□□ -0.78
TPM3-213ENST00000368545 ECM29Q5VYK3 1845 aa10.16□□□□□ -0.78
TPM3-213ENST00000368545 SCN9AQ15858 1988 aa10.15□□□□□ -0.78
TPM3-213ENST00000368545 GPR75-ASB3A0A0A6YYF3 556 aa10.15□□□□□ -0.78
TPM3-213ENST00000368545 GJB1P08034 283 aa10.15□□□□□ -0.78
TPM3-213ENST00000368545 GJB2P29033 226 aa10.15□□□□□ -0.78
TPM3-213ENST00000368545 MCM4P33991 863 aa10.15□□□□□ -0.78
TPM3-213ENST00000368545 ANTXR2P58335 489 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms