RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 RAB30Q15771 203 aa18.74■□□□□ 0.59
CKS1B-202ENST00000368436 IMMTQ16891 758 aaKnown RBP18.74■□□□□ 0.59
CKS1B-202ENST00000368436 BRDTQ58F21 947 aaPredicted RBP18.74■□□□□ 0.59
CKS1B-202ENST00000368436 OTOP2Q7RTS6 562 aa18.74■□□□□ 0.59
CKS1B-202ENST00000368436 RPUSD2Q8IZ73 545 aaKnown RBP18.74■□□□□ 0.59
CKS1B-202ENST00000368436 ADGRF4Q8IZF3 695 aa18.74■□□□□ 0.59
CKS1B-202ENST00000368436 TBC1D5Q92609 795 aa18.74■□□□□ 0.59
CKS1B-202ENST00000368436 YTHDC1Q96MU7 727 aaKnown RBP18.74■□□□□ 0.59
CKS1B-202ENST00000368436 GPHNQ9NQX3 736 aaPredicted RBP18.74■□□□□ 0.59
CKS1B-202ENST00000368436 TRMT13Q9NUP7 481 aaKnown RBP18.74■□□□□ 0.59
CKS1B-202ENST00000368436 CTNNA3Q9UI47 895 aa18.74■□□□□ 0.59
CKS1B-202ENST00000368436 TNKSO95271 1327 aa18.74■□□□□ 0.59
CKS1B-202ENST00000368436 RAD50Q92878 1312 aa18.74■□□□□ 0.59
CKS1B-202ENST00000368436 SCN5AQ14524 2016 aa18.73■□□□□ 0.59
CKS1B-202ENST00000368436 TXNP10599 105 aaKnown RBP18.73■□□□□ 0.59
CKS1B-202ENST00000368436 NBPF20Q3BBV1 942 aa18.73■□□□□ 0.59
CKS1B-202ENST00000368436 CCDC62Q6P9F0 684 aa18.73■□□□□ 0.59
CKS1B-202ENST00000368436 COPS5Q92905 334 aa18.73■□□□□ 0.59
CKS1B-202ENST00000368436 KRT23Q9C075 422 aa18.73■□□□□ 0.59
CKS1B-202ENST00000368436 MSRAQ9UJ68 235 aa18.73■□□□□ 0.59
CKS1B-202ENST00000368436 ARIH2O95376 493 aa18.72■□□□□ 0.59
CKS1B-202ENST00000368436 CYP2C9P11712 490 aa18.72■□□□□ 0.59
CKS1B-202ENST00000368436 TTLL4Q14679 1199 aa18.72■□□□□ 0.59
CKS1B-202ENST00000368436 NFRKBQ6P4R8 1299 aa18.72■□□□□ 0.59
CKS1B-202ENST00000368436 SYTL5Q8TDW5 730 aaPredicted RBP18.72■□□□□ 0.59
CKS1B-202ENST00000368436 SCLYQ96I15 445 aa18.72■□□□□ 0.59
CKS1B-202ENST00000368436 TAAR1Q96RJ0 339 aa18.72■□□□□ 0.59
CKS1B-202ENST00000368436 CNNM2Q9H8M5 875 aa18.72■□□□□ 0.59
CKS1B-202ENST00000368436 JMJD4Q9H9V9 463 aa18.72■□□□□ 0.59
CKS1B-202ENST00000368436 COL20A1Q9P218 1284 aa18.72■□□□□ 0.59
CKS1B-202ENST00000368436 PFKMP08237 780 aa18.71■□□□□ 0.59
CKS1B-202ENST00000368436 PARP1P09874 1014 aaKnown RBP18.71■□□□□ 0.59
CKS1B-202ENST00000368436 PTPN11Q06124 597 aaPredicted RBP18.71■□□□□ 0.59
CKS1B-202ENST00000368436 QRICH1Q2TAL8 776 aa18.71■□□□□ 0.59
CKS1B-202ENST00000368436 MCF2L2Q86YR7 1114 aa18.71■□□□□ 0.59
CKS1B-202ENST00000368436 USP38Q8NB14 1042 aa18.71■□□□□ 0.59
CKS1B-202ENST00000368436 NSUN6Q8TEA1 469 aaKnown RBP18.71■□□□□ 0.59
CKS1B-202ENST00000368436 IWS1Q96ST2 819 aa18.71■□□□□ 0.59
CKS1B-202ENST00000368436 IL25Q9H293 177 aa18.71■□□□□ 0.59
CKS1B-202ENST00000368436 TANC1Q9C0D5 1861 aa18.71■□□□□ 0.59
CKS1B-202ENST00000368436 MYO9BQ13459 2157 aa18.7■□□□□ 0.58
CKS1B-202ENST00000368436 FBXO11Q86XK2 927 aa18.7■□□□□ 0.58
CKS1B-202ENST00000368436 GAS2L1Q99501 681 aaPredicted RBP18.7■□□□□ 0.58
CKS1B-202ENST00000368436 NKX2-4Q9H2Z4 354 aa18.7■□□□□ 0.58
CKS1B-202ENST00000368436 PRDM12Q9H4Q4 367 aa18.7■□□□□ 0.58
CKS1B-202ENST00000368436 YBX2Q9Y2T7 364 aaKnown RBP18.7■□□□□ 0.58
CKS1B-202ENST00000368436 MRPL11Q9Y3B7 192 aaKnown RBP18.7■□□□□ 0.58
CKS1B-202ENST00000368436 SLC4A7Q9Y6M7 1214 aa18.7■□□□□ 0.58
CKS1B-202ENST00000368436 SEC23AQ15436 765 aa18.69■□□□□ 0.58
CKS1B-202ENST00000368436 STXBP2Q15833 593 aa18.69■□□□□ 0.58
CKS1B-202ENST00000368436 FAM47CQ5HY64 1035 aa18.69■□□□□ 0.58
CKS1B-202ENST00000368436 RMDN3Q96TC7 470 aa18.69■□□□□ 0.58
CKS1B-202ENST00000368436 UBAC1Q9BSL1 405 aa18.69■□□□□ 0.58
CKS1B-202ENST00000368436 VAT1LQ9HCJ6 419 aa18.69■□□□□ 0.58
CKS1B-202ENST00000368436 MYH7BA7E2Y1 1941 aa18.68■□□□□ 0.58
CKS1B-202ENST00000368436 TRIP12Q14669 1992 aaPredicted RBP18.68■□□□□ 0.58
CKS1B-202ENST00000368436 PITPNM1O00562 1244 aa18.68■□□□□ 0.58
CKS1B-202ENST00000368436 GH1P01241 217 aa18.68■□□□□ 0.58
CKS1B-202ENST00000368436 PDE4AP27815 886 aa18.68■□□□□ 0.58
CKS1B-202ENST00000368436 RFC2P35250 354 aa18.68■□□□□ 0.58
CKS1B-202ENST00000368436 GHRHRQ02643 423 aa18.68■□□□□ 0.58
CKS1B-202ENST00000368436 ARHGAP1Q07960 439 aa18.68■□□□□ 0.58
CKS1B-202ENST00000368436 IFIT1BQ5T764 474 aaKnown RBP18.68■□□□□ 0.58
CKS1B-202ENST00000368436 SEPT14Q6ZU15 432 aa18.68■□□□□ 0.58
CKS1B-202ENST00000368436 STAG2Q8N3U4 1231 aa18.68■□□□□ 0.58
CKS1B-202ENST00000368436 PPP1R13LQ8WUF5 828 aa18.68■□□□□ 0.58
CKS1B-202ENST00000368436 AFG1LQ8WV93 481 aa18.68■□□□□ 0.58
CKS1B-202ENST00000368436 MTMR8Q96EF0 704 aa18.68■□□□□ 0.58
CKS1B-202ENST00000368436 SLC28A3Q9HAS3 691 aa18.68■□□□□ 0.58
CKS1B-202ENST00000368436 PRUNE2Q8WUY3 3088 aa18.68■□□□□ 0.58
CKS1B-202ENST00000368436 CHD9Q3L8U1 2897 aa18.67■□□□□ 0.58
CKS1B-202ENST00000368436 OPLAHO14841 1288 aa18.67■□□□□ 0.58
CKS1B-202ENST00000368436 DHX16O60231 1041 aaKnown RBP18.67■□□□□ 0.58
CKS1B-202ENST00000368436 EIF3JO75822 258 aaKnown RBP18.67■□□□□ 0.58
CKS1B-202ENST00000368436 MMP3P08254 477 aa18.67■□□□□ 0.58
CKS1B-202ENST00000368436 IQCF3P0C7M6 154 aa18.67■□□□□ 0.58
CKS1B-202ENST00000368436 GSPT1P15170 499 aaKnown RBP18.67■□□□□ 0.58
CKS1B-202ENST00000368436 RABGGTBP53611 331 aa18.67■□□□□ 0.58
CKS1B-202ENST00000368436 ADGRE1Q14246 886 aa18.67■□□□□ 0.58
CKS1B-202ENST00000368436 LY6KQ17RY6 165 aa18.67■□□□□ 0.58
CKS1B-202ENST00000368436 CYB5R4Q7L1T6 521 aa18.67■□□□□ 0.58
CKS1B-202ENST00000368436 AMNQ9BXJ7 453 aa18.67■□□□□ 0.58
CKS1B-202ENST00000368436 PCDHA11Q9Y5I1 949 aa18.67■□□□□ 0.58
CKS1B-202ENST00000368436 PALM3A6NDB9 673 aaPredicted RBP18.66■□□□□ 0.58
CKS1B-202ENST00000368436 KLRF2D3W0D1 207 aa18.66■□□□□ 0.58
CKS1B-202ENST00000368436 HSD17B4P51659 736 aa18.66■□□□□ 0.58
CKS1B-202ENST00000368436 TTC22Q5TAA0 569 aa18.66■□□□□ 0.58
CKS1B-202ENST00000368436 ARHGEF16Q5VV41 709 aa18.66■□□□□ 0.58
CKS1B-202ENST00000368436 DEFB128Q7Z7B8 93 aa18.66■□□□□ 0.58
CKS1B-202ENST00000368436 SESTD1Q86VW0 696 aa18.66■□□□□ 0.58
CKS1B-202ENST00000368436 RETREG2Q8NC44 543 aa18.66■□□□□ 0.58
CKS1B-202ENST00000368436 SYMPKQ92797 1274 aaKnown RBP18.66■□□□□ 0.58
CKS1B-202ENST00000368436 PXMP2Q9NR77 195 aa18.66■□□□□ 0.58
CKS1B-202ENST00000368436 MAP3K20Q9NYL2 800 aaKnown RBP18.66■□□□□ 0.58
CKS1B-202ENST00000368436 MAD2L2Q9UI95 211 aa18.66■□□□□ 0.58
CKS1B-202ENST00000368436 DDX41Q9UJV9 622 aaKnown RBP18.66■□□□□ 0.58
CKS1B-202ENST00000368436 VCANP13611 3396 aa18.65■□□□□ 0.58
CKS1B-202ENST00000368436 ZBBXA8MT70 800 aa18.65■□□□□ 0.58
CKS1B-202ENST00000368436 CFBP00751 764 aa18.65■□□□□ 0.58
CKS1B-202ENST00000368436 ATP2A2P16615 1042 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms