RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 C6orf50Q9HD87 102 aa14.53□□□□□ -0.08
EFNA1-201ENST00000368406 SH3GLB2Q9NR46 395 aa14.53□□□□□ -0.08
EFNA1-201ENST00000368406 CYP39A1Q9NYL5 469 aa14.53□□□□□ -0.08
EFNA1-201ENST00000368406 SYNGAP1Q96PV0 1343 aa14.52□□□□□ -0.08
EFNA1-201ENST00000368406 SMCO2A6NFE2 343 aa14.52□□□□□ -0.08
EFNA1-201ENST00000368406 FDPSP14324 419 aaKnown RBP14.52□□□□□ -0.08
EFNA1-201ENST00000368406 CALML3P27482 149 aa14.52□□□□□ -0.08
EFNA1-201ENST00000368406 SAFBQ15424 915 aaKnown RBP eCLIP14.52□□□□□ -0.08
EFNA1-201ENST00000368406 RNF207Q6ZRF8 634 aa14.52□□□□□ -0.08
EFNA1-201ENST00000368406 BICD2Q8TD16 824 aa14.52□□□□□ -0.08
EFNA1-201ENST00000368406 GLT8D2Q9H1C3 349 aa14.52□□□□□ -0.08
EFNA1-201ENST00000368406 PSTPIP2Q9H939 334 aa14.52□□□□□ -0.08
EFNA1-201ENST00000368406 POTEB2H3BUK9 544 aa14.51□□□□□ -0.09
EFNA1-201ENST00000368406 GCOM1H8Y6P7 765 aaPredicted RBP14.51□□□□□ -0.09
EFNA1-201ENST00000368406 MSCO60682 206 aa14.51□□□□□ -0.09
EFNA1-201ENST00000368406 POLR2MP0CAP2 368 aa14.51□□□□□ -0.09
EFNA1-201ENST00000368406 CYBAP13498 195 aa14.51□□□□□ -0.09
EFNA1-201ENST00000368406 PDCP20941 246 aa14.51□□□□□ -0.09
EFNA1-201ENST00000368406 GNA11P29992 359 aa14.51□□□□□ -0.09
EFNA1-201ENST00000368406 MRPL12P52815 198 aaKnown RBP14.51□□□□□ -0.09
EFNA1-201ENST00000368406 GUCY1B3Q02153 619 aa14.51□□□□□ -0.09
EFNA1-201ENST00000368406 FGD4Q96M96 766 aa14.51□□□□□ -0.09
EFNA1-201ENST00000368406 KCNJ14Q9UNX9 436 aa14.51□□□□□ -0.09
EFNA1-201ENST00000368406 LOC102724159A0A0B4J2E5 919 aa14.5□□□□□ -0.09
EFNA1-201ENST00000368406 VPS37CA5D8V6 355 aaPredicted RBP14.5□□□□□ -0.09
EFNA1-201ENST00000368406 CCND3P30281 292 aaPredicted RBP14.5□□□□□ -0.09
EFNA1-201ENST00000368406 HOXA13P31271 388 aaPredicted RBP14.5□□□□□ -0.09
EFNA1-201ENST00000368406 CNTN2Q02246 1040 aa14.5□□□□□ -0.09
EFNA1-201ENST00000368406 MLLT1Q03111 559 aaPredicted RBP14.5□□□□□ -0.09
EFNA1-201ENST00000368406 PWP2Q15269 919 aaKnown RBP14.5□□□□□ -0.09
EFNA1-201ENST00000368406 UBE2SQ16763 222 aa14.5□□□□□ -0.09
EFNA1-201ENST00000368406 LARP1BQ659C4 914 aaKnown RBP14.5□□□□□ -0.09
EFNA1-201ENST00000368406 SLC30A10Q6XR72 485 aa14.5□□□□□ -0.09
EFNA1-201ENST00000368406 TRPV1Q8NER1 839 aa14.5□□□□□ -0.09
EFNA1-201ENST00000368406 SHISA4Q96DD7 197 aa14.5□□□□□ -0.09
EFNA1-201ENST00000368406 RIC8AQ9NPQ8 531 aa14.5□□□□□ -0.09
EFNA1-201ENST00000368406 CNPY2Q9Y2B0 182 aa14.5□□□□□ -0.09
EFNA1-201ENST00000368406 TNRC18O15417 2968 aaPredicted RBP14.5□□□□□ -0.09
EFNA1-201ENST00000368406 ESYT2A0FGR8 921 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 ASB14A6NK59 587 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 SPDYE3A6NKU9 549 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 SEPT4O43236 478 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 TFRCP02786 760 aaKnown RBP14.49□□□□□ -0.09
EFNA1-201ENST00000368406 KRT2P35908 639 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 BAATQ14032 418 aaPredicted RBP14.49□□□□□ -0.09
EFNA1-201ENST00000368406 LHX8Q68G74 356 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 KRT40Q6A162 431 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 TYW1BQ6NUM6 668 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 FCHSD1Q86WN1 690 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 FAM177A1Q8N128 213 aaPredicted RBP14.49□□□□□ -0.09
EFNA1-201ENST00000368406 REXO1Q8N1G1 1221 aaKnown RBP14.49□□□□□ -0.09
EFNA1-201ENST00000368406 ANKLE1Q8NAG6 615 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 EHMT1Q9H9B1 1298 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 OGDHLQ9ULD0 1010 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 SOWAHBA6NEL2 793 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 SNAI1O95863 264 aaPredicted RBP14.49□□□□□ -0.09
EFNA1-201ENST00000368406 CNGA1P29973 690 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 RPS6P62753 249 aaKnown RBP14.49□□□□□ -0.09
EFNA1-201ENST00000368406 MCTP1Q6DN14 999 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 GALNT17Q6IS24 598 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 USP17L6PQ6QN14 398 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 UBE2Q1Q7Z7E8 422 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 BLIDQ8IZY5 108 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 SAMD3Q8N6K7 520 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 MPHOSPH6Q99547 160 aaKnown RBP14.49□□□□□ -0.09
EFNA1-201ENST00000368406 PHF20Q9BVI0 1012 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 ZMYND12Q9H0C1 365 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 ABHD16BQ9H3Z7 469 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 GJB4Q9NTQ9 266 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 MAP3K20Q9NYL2 800 aaKnown RBP14.49□□□□□ -0.09
EFNA1-201ENST00000368406 ADD3Q9UEY8 706 aaKnown RBP14.49□□□□□ -0.09
EFNA1-201ENST00000368406 DDX20Q9UHI6 824 aaKnown RBP14.49□□□□□ -0.09
EFNA1-201ENST00000368406 PCDHA4Q9UN74 947 aa14.49□□□□□ -0.09
EFNA1-201ENST00000368406 OPLAHO14841 1288 aa14.48□□□□□ -0.09
EFNA1-201ENST00000368406 MMP1P03956 469 aa14.48□□□□□ -0.09
EFNA1-201ENST00000368406 ZNF865P0CJ78 1059 aaPredicted RBP14.48□□□□□ -0.09
EFNA1-201ENST00000368406 HSD17B4P51659 736 aa14.48□□□□□ -0.09
EFNA1-201ENST00000368406 GHRHRQ02643 423 aa14.48□□□□□ -0.09
EFNA1-201ENST00000368406 PRAMEF19Q5SWL8 479 aa14.48□□□□□ -0.09
EFNA1-201ENST00000368406 ARMCX2Q7L311 632 aa14.48□□□□□ -0.09
EFNA1-201ENST00000368406 DNERQ8NFT8 737 aa14.48□□□□□ -0.09
EFNA1-201ENST00000368406 MORC4Q8TE76 937 aa14.48□□□□□ -0.09
EFNA1-201ENST00000368406 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.48□□□□□ -0.09
EFNA1-201ENST00000368406 CCDC194A0A1B0GVG4 234 aa14.47□□□□□ -0.09
EFNA1-201ENST00000368406 ACVR2BQ13705 512 aa14.47□□□□□ -0.09
EFNA1-201ENST00000368406 ARHGEF16Q5VV41 709 aa14.47□□□□□ -0.09
EFNA1-201ENST00000368406 JAKMIP3Q5VZ66 844 aa14.47□□□□□ -0.09
EFNA1-201ENST00000368406 MCTP2Q6DN12 878 aa14.47□□□□□ -0.09
EFNA1-201ENST00000368406 DIS3L2Q8IYB7 885 aaKnown RBP14.47□□□□□ -0.09
EFNA1-201ENST00000368406 FBXO18Q8NFZ0 1043 aa14.47□□□□□ -0.09
EFNA1-201ENST00000368406 SYTL5Q8TDW5 730 aaPredicted RBP14.47□□□□□ -0.09
EFNA1-201ENST00000368406 TBC1D5Q92609 795 aa14.47□□□□□ -0.09
EFNA1-201ENST00000368406 TMEM260Q9NX78 707 aa14.47□□□□□ -0.09
EFNA1-201ENST00000368406 ASTN1O14525 1302 aa14.46□□□□□ -0.09
EFNA1-201ENST00000368406 DNAH12Q6ZR08 3092 aa14.46□□□□□ -0.09
EFNA1-201ENST00000368406 B4DLN1 442 aa14.46□□□□□ -0.09
EFNA1-201ENST00000368406 PIK3CDO00329 1044 aa14.46□□□□□ -0.09
EFNA1-201ENST00000368406 AP3B2Q13367 1082 aa14.46□□□□□ -0.09
EFNA1-201ENST00000368406 TEX2Q8IWB9 1127 aa14.46□□□□□ -0.09
EFNA1-201ENST00000368406 DAGLBQ8NCG7 672 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms