RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 RBM47A0AV96 593 aaKnown RBP25.89■■□□□ 1.74
ECHDC1-203ENST00000368291 TNFAIP2Q03169 654 aa25.89■■□□□ 1.74
ECHDC1-203ENST00000368291 GPKOWQ92917 476 aaPredicted RBP eCLIP25.89■■□□□ 1.74
ECHDC1-203ENST00000368291 ZNF274Q96GC6 653 aaPredicted RBP25.89■■□□□ 1.74
ECHDC1-203ENST00000368291 IWS1Q96ST2 819 aa25.89■■□□□ 1.74
ECHDC1-203ENST00000368291 ALDH8A1Q9H2A2 487 aaPredicted RBP25.89■■□□□ 1.74
ECHDC1-203ENST00000368291 GTF3C3Q9Y5Q9 886 aa25.89■■□□□ 1.74
ECHDC1-203ENST00000368291 MEIS2O14770 477 aa25.88■■□□□ 1.73
ECHDC1-203ENST00000368291 SMPD1P17405 629 aa25.88■■□□□ 1.73
ECHDC1-203ENST00000368291 EIF2AK2P19525 551 aaKnown RBP25.88■■□□□ 1.73
ECHDC1-203ENST00000368291 CCT2P78371 535 aaKnown RBP25.88■■□□□ 1.73
ECHDC1-203ENST00000368291 ARHGEF16Q5VV41 709 aa25.88■■□□□ 1.73
ECHDC1-203ENST00000368291 WWC2Q6AWC2 1192 aa25.88■■□□□ 1.73
ECHDC1-203ENST00000368291 IQSEC1Q6DN90 963 aa25.88■■□□□ 1.73
ECHDC1-203ENST00000368291 TYW1BQ6NUM6 668 aa25.88■■□□□ 1.73
ECHDC1-203ENST00000368291 KLHDC9Q8NEP7 349 aa25.88■■□□□ 1.73
ECHDC1-203ENST00000368291 MPHOSPH6Q99547 160 aaKnown RBP25.88■■□□□ 1.73
ECHDC1-203ENST00000368291 UPF3AQ9H1J1 476 aaKnown RBP25.88■■□□□ 1.73
ECHDC1-203ENST00000368291 NCOA5Q9HCD5 579 aaKnown RBP25.88■■□□□ 1.73
ECHDC1-203ENST00000368291 DNAH12Q6ZR08 3092 aa25.88■■□□□ 1.73
ECHDC1-203ENST00000368291 MYADML2A6NDP7 307 aa25.87■■□□□ 1.73
ECHDC1-203ENST00000368291 CTAGE5O15320 804 aa25.87■■□□□ 1.73
ECHDC1-203ENST00000368291 MYCNP04198 464 aaPredicted RBP25.87■■□□□ 1.73
ECHDC1-203ENST00000368291 GJA9P57773 515 aa25.87■■□□□ 1.73
ECHDC1-203ENST00000368291 USP17L6PQ6QN14 398 aa25.87■■□□□ 1.73
ECHDC1-203ENST00000368291 HEATR3Q7Z4Q2 680 aa25.87■■□□□ 1.73
ECHDC1-203ENST00000368291 PDCD2LQ9BRP1 358 aa25.87■■□□□ 1.73
ECHDC1-203ENST00000368291 HTATIP2Q9BUP3 242 aa25.87■■□□□ 1.73
ECHDC1-203ENST00000368291 MYH7BA7E2Y1 1941 aa25.87■■□□□ 1.73
ECHDC1-203ENST00000368291 B4DLN1 442 aa25.86■■□□□ 1.73
ECHDC1-203ENST00000368291 KBTBD13C9JR72 458 aa25.86■■□□□ 1.73
ECHDC1-203ENST00000368291 PIK3CDO00329 1044 aa25.86■■□□□ 1.73
ECHDC1-203ENST00000368291 NR3C2P08235 984 aa25.86■■□□□ 1.73
ECHDC1-203ENST00000368291 MRPL12P52815 198 aaKnown RBP25.86■■□□□ 1.73
ECHDC1-203ENST00000368291 NKX3-2P78367 333 aa25.86■■□□□ 1.73
ECHDC1-203ENST00000368291 CCSAPQ6IQ19 270 aaPredicted RBP25.86■■□□□ 1.73
ECHDC1-203ENST00000368291 FCHSD1Q86WN1 690 aa25.86■■□□□ 1.73
ECHDC1-203ENST00000368291 SENP6Q9GZR1 1112 aaPredicted RBP25.86■■□□□ 1.73
ECHDC1-203ENST00000368291 CST5P28325 142 aaPredicted RBP25.85■■□□□ 1.73
ECHDC1-203ENST00000368291 PGM5Q15124 567 aa25.85■■□□□ 1.73
ECHDC1-203ENST00000368291 RNF180Q86T96 592 aa25.85■■□□□ 1.73
ECHDC1-203ENST00000368291 IL31RAQ8NI17 732 aa25.85■■□□□ 1.73
ECHDC1-203ENST00000368291 FRMPD4Q14CM0 1322 aa25.85■■□□□ 1.73
ECHDC1-203ENST00000368291 STXBP3O00186 592 aa25.84■■□□□ 1.73
ECHDC1-203ENST00000368291 IFNAR1P17181 557 aa25.84■■□□□ 1.73
ECHDC1-203ENST00000368291 AK2P54819 239 aa25.84■■□□□ 1.73
ECHDC1-203ENST00000368291 STXBP2Q15833 593 aa25.84■■□□□ 1.73
ECHDC1-203ENST00000368291 PKN1Q16512 942 aa25.84■■□□□ 1.73
ECHDC1-203ENST00000368291 DUSP28Q4G0W2 176 aa25.84■■□□□ 1.73
ECHDC1-203ENST00000368291 PHKBQ93100 1093 aa25.84■■□□□ 1.73
ECHDC1-203ENST00000368291 WDR11Q9BZH6 1224 aa25.84■■□□□ 1.73
ECHDC1-203ENST00000368291 PSTPIP2Q9H939 334 aa25.84■■□□□ 1.73
ECHDC1-203ENST00000368291 PHF24Q9UPV7 400 aa25.84■■□□□ 1.73
ECHDC1-203ENST00000368291 PRPF3O43395 683 aaKnown RBP25.83■■□□□ 1.73
ECHDC1-203ENST00000368291 PFKFB3Q16875 520 aaPredicted RBP25.83■■□□□ 1.73
ECHDC1-203ENST00000368291 TLK2Q86UE8 772 aa25.83■■□□□ 1.73
ECHDC1-203ENST00000368291 DPF3Q92784 378 aa25.83■■□□□ 1.73
ECHDC1-203ENST00000368291 KIF2CQ99661 725 aa25.83■■□□□ 1.73
ECHDC1-203ENST00000368291 BARHL2Q9NY43 387 aa25.83■■□□□ 1.73
ECHDC1-203ENST00000368291 TPCN1Q9ULQ1 816 aa25.83■■□□□ 1.73
ECHDC1-203ENST00000368291 PPFIA3O75145 1194 aa25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 ARIH2O95376 493 aa25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 C6orf222P0C671 652 aaPredicted RBP25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 STK3Q13188 491 aa25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 LRRC26Q2I0M4 334 aa25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 NOL8Q76FK4 1167 aaKnown RBP25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 VSIG10LQ86VR7 867 aa25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 SMARCC2Q8TAQ2 1214 aa25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 TSEN34Q9BSV6 310 aaKnown RBP25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 Q9Y3F1 56 aa25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 hCG_1984214I3L0E3 225 aa25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 DYNC1LI2O43237 492 aaPredicted RBP25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 RGS20O76081 388 aa25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 SCG2P13521 617 aa25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 NAPAP54920 295 aa25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 KCNA10Q16322 511 aa25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 UBE2SQ16763 222 aa25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 CCDC62Q6P9F0 684 aa25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 ZNF713Q8N859 430 aaPredicted RBP25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 SCFD2Q8WU76 684 aa25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 CUL5Q93034 780 aa25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 FERMT2Q96AC1 680 aa25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 RNF26Q9BY78 433 aaPredicted RBP25.82■■□□□ 1.72
ECHDC1-203ENST00000368291 EIF3JO75822 258 aaKnown RBP25.81■■□□□ 1.72
ECHDC1-203ENST00000368291 MYCLP12524 364 aaPredicted RBP25.81■■□□□ 1.72
ECHDC1-203ENST00000368291 NEK4P51957 841 aa25.81■■□□□ 1.72
ECHDC1-203ENST00000368291 BEX3Q00994 111 aa25.81■■□□□ 1.72
ECHDC1-203ENST00000368291 PPP1R18Q6NYC8 613 aa25.81■■□□□ 1.72
ECHDC1-203ENST00000368291 SEPT14Q6ZU15 432 aa25.81■■□□□ 1.72
ECHDC1-203ENST00000368291 COPS5Q92905 334 aa25.81■■□□□ 1.72
ECHDC1-203ENST00000368291 ZFP91Q96JP5 570 aaPredicted RBP25.81■■□□□ 1.72
ECHDC1-203ENST00000368291 SPC25Q9HBM1 224 aa25.81■■□□□ 1.72
ECHDC1-203ENST00000368291 DOCK5Q9H7D0 1870 aa25.8■■□□□ 1.72
ECHDC1-203ENST00000368291 ACLYP53396 1101 aa25.8■■□□□ 1.72
ECHDC1-203ENST00000368291 ATN1P54259 1190 aaPredicted RBP25.8■■□□□ 1.72
ECHDC1-203ENST00000368291 SCRN1Q12765 414 aa25.8■■□□□ 1.72
ECHDC1-203ENST00000368291 GNASQ5JWF2 1037 aa25.8■■□□□ 1.72
ECHDC1-203ENST00000368291 SLC26A6Q9BXS9 759 aa25.8■■□□□ 1.72
ECHDC1-203ENST00000368291 RIC8AQ9NPQ8 531 aa25.8■■□□□ 1.72
ECHDC1-203ENST00000368291 A0A1W2PQ45 241 aaPredicted RBP25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms