RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 TXNDC5Q8NBS9 432 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-201ENST00000368287 C11orf84Q9BUA3 381 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-201ENST00000368287 LRRC3Q9BY71 257 aa5.59□□□□□ -1.51
ECHDC1-201ENST00000368287 ACBD3Q9H3P7 528 aa5.59□□□□□ -1.51
ECHDC1-201ENST00000368287 PCDH18Q9HCL0 1135 aa5.59□□□□□ -1.51
ECHDC1-201ENST00000368287 KCNQ5Q9NR82 932 aa5.59□□□□□ -1.51
ECHDC1-201ENST00000368287 ADAMTS1Q9UHI8 967 aa5.59□□□□□ -1.51
ECHDC1-201ENST00000368287 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-201ENST00000368287 LTBP3Q9NS15 1303 aa5.58□□□□□ -1.52
ECHDC1-201ENST00000368287 SHOXO15266 292 aa5.58□□□□□ -1.52
ECHDC1-201ENST00000368287 C8BP07358 591 aa5.58□□□□□ -1.52
ECHDC1-201ENST00000368287 APOBRQ0VD83 1088 aa5.58□□□□□ -1.52
ECHDC1-201ENST00000368287 FHL2Q14192 279 aa5.58□□□□□ -1.52
ECHDC1-201ENST00000368287 SMN1Q16637 294 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-201ENST00000368287 NOL9Q5SY16 702 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-201ENST00000368287 CIR1Q86X95 450 aaPredicted RBP5.58□□□□□ -1.52
ECHDC1-201ENST00000368287 LZTR1Q8N653 840 aa5.58□□□□□ -1.52
ECHDC1-201ENST00000368287 KYQ8NBH2 561 aa5.58□□□□□ -1.52
ECHDC1-201ENST00000368287 LCORQ96JN0 433 aaPredicted RBP5.58□□□□□ -1.52
ECHDC1-201ENST00000368287 NT5C1AQ9BXI3 368 aa5.58□□□□□ -1.52
ECHDC1-201ENST00000368287 ZNF341Q9BYN7 854 aa5.58□□□□□ -1.52
ECHDC1-201ENST00000368287 TGIF2Q9GZN2 237 aa5.58□□□□□ -1.52
ECHDC1-201ENST00000368287 CCSER2Q9H7U1 834 aa5.58□□□□□ -1.52
ECHDC1-201ENST00000368287 EHMT1Q9H9B1 1298 aa5.58□□□□□ -1.52
ECHDC1-201ENST00000368287 TCAF1Q9Y4C2 921 aa5.58□□□□□ -1.52
ECHDC1-201ENST00000368287 TNFRSF10CO14798 259 aa5.57□□□□□ -1.52
ECHDC1-201ENST00000368287 MUSKO15146 869 aa5.57□□□□□ -1.52
ECHDC1-201ENST00000368287 SELENOPP49908 381 aa5.57□□□□□ -1.52
ECHDC1-201ENST00000368287 NKD1Q969G9 470 aa5.57□□□□□ -1.52
ECHDC1-201ENST00000368287 FCRL3Q96P31 734 aaPredicted RBP5.57□□□□□ -1.52
ECHDC1-201ENST00000368287 WDR26Q9H7D7 661 aa5.57□□□□□ -1.52
ECHDC1-201ENST00000368287 SUCOQ9UBS9 1254 aaKnown RBP5.57□□□□□ -1.52
ECHDC1-201ENST00000368287 RWDD3Q9Y3V2 267 aa5.57□□□□□ -1.52
ECHDC1-201ENST00000368287 DDX3XO00571 662 aaKnown RBP eCLIP5.56□□□□□ -1.527e-10■■■□□ 16
ECHDC1-201ENST00000368287 GPR42O15529 346 aa5.56□□□□□ -1.52
ECHDC1-201ENST00000368287 B4GALT3O60512 393 aa5.56□□□□□ -1.52
ECHDC1-201ENST00000368287 CD3EP07766 207 aa5.56□□□□□ -1.52
ECHDC1-201ENST00000368287 ACRP10323 421 aa5.56□□□□□ -1.52
ECHDC1-201ENST00000368287 IFNGR1P15260 489 aa5.56□□□□□ -1.52
ECHDC1-201ENST00000368287 MCM4P33991 863 aa5.56□□□□□ -1.52
ECHDC1-201ENST00000368287 ZNF165P49910 485 aa5.56□□□□□ -1.52
ECHDC1-201ENST00000368287 SEZ6Q53EL9 994 aa5.56□□□□□ -1.52
ECHDC1-201ENST00000368287 SPDYAQ5MJ70 313 aa5.56□□□□□ -1.52
ECHDC1-201ENST00000368287 TTLL6Q8N841 843 aa5.56□□□□□ -1.52
ECHDC1-201ENST00000368287 DNERQ8NFT8 737 aa5.56□□□□□ -1.52
ECHDC1-201ENST00000368287 BRF1Q92994 677 aa5.56□□□□□ -1.52
ECHDC1-201ENST00000368287 DHRS1Q96LJ7 313 aa5.56□□□□□ -1.52
ECHDC1-201ENST00000368287 SPATA32Q96LK8 384 aa5.56□□□□□ -1.52
ECHDC1-201ENST00000368287 UBP1Q9NZI7 540 aa5.56□□□□□ -1.52
ECHDC1-201ENST00000368287 FBLN5Q9UBX5 448 aa5.56□□□□□ -1.52
ECHDC1-201ENST00000368287 C9IYK1 514 aa5.55□□□□□ -1.52
ECHDC1-201ENST00000368287 INHBEP58166 350 aa5.55□□□□□ -1.52
ECHDC1-201ENST00000368287 GNL2Q13823 731 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-201ENST00000368287 LRRFIP1Q32MZ4 808 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-201ENST00000368287 GK5Q6ZS86 529 aa5.55□□□□□ -1.52
ECHDC1-201ENST00000368287 VPS37DQ86XT2 251 aa5.55□□□□□ -1.52
ECHDC1-201ENST00000368287 FIBCD1Q8N539 461 aa5.55□□□□□ -1.52
ECHDC1-201ENST00000368287 IGDCC4Q8TDY8 1250 aa5.55□□□□□ -1.52
ECHDC1-201ENST00000368287 SLC9A7Q96T83 725 aa5.55□□□□□ -1.52
ECHDC1-201ENST00000368287 SYT3Q9BQG1 590 aa5.55□□□□□ -1.52
ECHDC1-201ENST00000368287 TINF2Q9BSI4 451 aa5.55□□□□□ -1.52
ECHDC1-201ENST00000368287 INPP5FQ9Y2H2 1132 aa5.55□□□□□ -1.52
ECHDC1-201ENST00000368287 FAM86C2PA6NEL3 165 aa5.54□□□□□ -1.52
ECHDC1-201ENST00000368287 C9orf118A6NHY6 69 aa5.54□□□□□ -1.52
ECHDC1-201ENST00000368287 IGSF3O75054 1194 aa5.54□□□□□ -1.52
ECHDC1-201ENST00000368287 ZNF445P59923 1031 aa5.54□□□□□ -1.52
ECHDC1-201ENST00000368287 POU4F1Q01851 419 aa5.54□□□□□ -1.52
ECHDC1-201ENST00000368287 CLCQ05315 142 aa5.54□□□□□ -1.52
ECHDC1-201ENST00000368287 PAK2Q13177 524 aa5.54□□□□□ -1.52
ECHDC1-201ENST00000368287 NAALADL2Q58DX5 795 aa5.54□□□□□ -1.52
ECHDC1-201ENST00000368287 TDRD10Q5VZ19 366 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-201ENST00000368287 WWC2Q6AWC2 1192 aa5.54□□□□□ -1.52
ECHDC1-201ENST00000368287 ETV3LQ6ZN32 361 aa5.54□□□□□ -1.52
ECHDC1-201ENST00000368287 ZNF575Q86XF7 245 aa5.54□□□□□ -1.52
ECHDC1-201ENST00000368287 SLITRK4Q8IW52 837 aa5.54□□□□□ -1.52
ECHDC1-201ENST00000368287 REXO1Q8N1G1 1221 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-201ENST00000368287 SEMA4AQ9H3S1 761 aa5.54□□□□□ -1.52
ECHDC1-201ENST00000368287 JADE2Q9NQC1 790 aa5.54□□□□□ -1.52
ECHDC1-201ENST00000368287 SF3B6Q9Y3B4 125 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-201ENST00000368287 FHOD1Q9Y613 1164 aa5.54□□□□□ -1.52
ECHDC1-201ENST00000368287 WDR33Q9C0J8 1336 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-201ENST00000368287 MEIS3P2A8K0S8 358 aa5.53□□□□□ -1.52
ECHDC1-201ENST00000368287 CYP1A1P04798 512 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-201ENST00000368287 ZC3H6P61129 1189 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-201ENST00000368287 COL9A2Q14055 689 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-201ENST00000368287 R3HDM1Q15032 1099 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-201ENST00000368287 STK32CQ86UX6 486 aa5.53□□□□□ -1.52
ECHDC1-201ENST00000368287 USP33Q8TEY7 942 aa5.53□□□□□ -1.52
ECHDC1-201ENST00000368287 GPRASP2Q96D09 838 aa5.53□□□□□ -1.52
ECHDC1-201ENST00000368287 CAPN10Q9HC96 672 aa5.53□□□□□ -1.52
ECHDC1-201ENST00000368287 GP6Q9HCN6 339 aa5.53□□□□□ -1.52
ECHDC1-201ENST00000368287 NPIPB8E9PQR5 432 aa5.52□□□□□ -1.53
ECHDC1-201ENST00000368287 IMPDH2P12268 514 aa5.52□□□□□ -1.53
ECHDC1-201ENST00000368287 CRKP46108 304 aa5.52□□□□□ -1.53
ECHDC1-201ENST00000368287 PURAQ00577 322 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-201ENST00000368287 PRR31Q5SQ13 230 aa5.52□□□□□ -1.53
ECHDC1-201ENST00000368287 DCAF15Q66K64 600 aa5.52□□□□□ -1.53
ECHDC1-201ENST00000368287 CD300LDQ6UXZ3 194 aa5.52□□□□□ -1.53
ECHDC1-201ENST00000368287 ARHGEF18Q6ZSZ5 1173 aa5.52□□□□□ -1.53
ECHDC1-201ENST00000368287 SMARCC1Q92922 1105 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms