RNA–Protein interactions for RNA: ENST00000368205.7

PTPRK-202, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 662 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-202ENST00000368205 RBM15Q96T37 977 aaKnown RBP eCLIP6.85□□□□□ -1.31
PTPRK-202ENST00000368205 PCDH18Q9HCL0 1135 aa6.85□□□□□ -1.31
PTPRK-202ENST00000368205 PALD1Q9ULE6 856 aa6.85□□□□□ -1.31
PTPRK-202ENST00000368205 NPHS1O60500 1241 aa6.84□□□□□ -1.31
PTPRK-202ENST00000368205 ITGB3P05106 788 aa6.84□□□□□ -1.31
PTPRK-202ENST00000368205 INSRRP14616 1297 aa6.84□□□□□ -1.31
PTPRK-202ENST00000368205 MAGEA10P43363 369 aaPredicted RBP6.84□□□□□ -1.31
PTPRK-202ENST00000368205 ZNF513Q8N8E2 541 aaPredicted RBP6.84□□□□□ -1.31
PTPRK-202ENST00000368205 DDX1Q92499 740 aaKnown RBP6.84□□□□□ -1.31
PTPRK-202ENST00000368205 ZBTB8AQ96BR9 441 aa6.84□□□□□ -1.31
PTPRK-202ENST00000368205 GPR20Q99678 358 aa6.84□□□□□ -1.31
PTPRK-202ENST00000368205 TMPRSS5Q9H3S3 457 aa6.84□□□□□ -1.31
PTPRK-202ENST00000368205 EFR3BQ9Y2G0 817 aa6.84□□□□□ -1.31
PTPRK-202ENST00000368205 VAMP1P23763 118 aa6.83□□□□□ -1.32
PTPRK-202ENST00000368205 DCP2Q8IU60 420 aaKnown RBP6.83□□□□□ -1.32
PTPRK-202ENST00000368205 COPS5Q92905 334 aa6.83□□□□□ -1.32
PTPRK-202ENST00000368205 MMP19Q99542 508 aa6.83□□□□□ -1.32
PTPRK-202ENST00000368205 SCAMP3O14828 347 aaKnown RBP6.82□□□□□ -1.32
PTPRK-202ENST00000368205 RECKO95980 971 aa6.82□□□□□ -1.32
PTPRK-202ENST00000368205 C8BP07358 591 aa6.82□□□□□ -1.32
PTPRK-202ENST00000368205 CYP2C8P10632 490 aa6.82□□□□□ -1.32
PTPRK-202ENST00000368205 CASP7P55210 303 aa6.82□□□□□ -1.32
PTPRK-202ENST00000368205 ADAM17P78536 824 aa6.82□□□□□ -1.32
PTPRK-202ENST00000368205 PUM1Q14671 1186 aaKnown RBP eCLIP6.82□□□□□ -1.32
PTPRK-202ENST00000368205 PLEKHO2Q8TD55 490 aa6.82□□□□□ -1.32
PTPRK-202ENST00000368205 ADAMTS17Q8TE56 1095 aa6.82□□□□□ -1.32
PTPRK-202ENST00000368205 USP33Q8TEY7 942 aa6.82□□□□□ -1.32
PTPRK-202ENST00000368205 GPRASP2Q96D09 838 aa6.82□□□□□ -1.32
PTPRK-202ENST00000368205 DDX11Q96FC9 970 aa6.82□□□□□ -1.32
PTPRK-202ENST00000368205 GORASP1Q9BQQ3 440 aa6.82□□□□□ -1.32
PTPRK-202ENST00000368205 SUGT1Q9Y2Z0 365 aa6.82□□□□□ -1.32
PTPRK-202ENST00000368205 ANKRD34BA5PLL1 514 aa6.81□□□□□ -1.32
PTPRK-202ENST00000368205 SMARCA5O60264 1052 aaPredicted RBP6.81□□□□□ -1.32
PTPRK-202ENST00000368205 NTRK1P04629 796 aa6.81□□□□□ -1.32
PTPRK-202ENST00000368205 RPL13P26373 211 aaKnown RBP6.81□□□□□ -1.32
PTPRK-202ENST00000368205 METTL16Q86W50 562 aaKnown RBP6.81□□□□□ -1.32
PTPRK-202ENST00000368205 MIB1Q86YT6 1006 aa6.81□□□□□ -1.32
PTPRK-202ENST00000368205 CRACR2BQ8N4Y2 399 aaPredicted RBP6.81□□□□□ -1.32
PTPRK-202ENST00000368205 TTC9BQ8N6N2 239 aa6.81□□□□□ -1.32
PTPRK-202ENST00000368205 SHDQ96IW2 340 aa6.81□□□□□ -1.32
PTPRK-202ENST00000368205 C11orf84Q9BUA3 381 aaPredicted RBP6.81□□□□□ -1.32
PTPRK-202ENST00000368205 SMPD4Q9NXE4 827 aa6.81□□□□□ -1.32
PTPRK-202ENST00000368205 FUCA1P04066 466 aa6.8□□□□□ -1.32
PTPRK-202ENST00000368205 THBS2P35442 1172 aa6.8□□□□□ -1.32
PTPRK-202ENST00000368205 GJA8P48165 433 aa6.8□□□□□ -1.32
PTPRK-202ENST00000368205 SMAD4Q13485 552 aaKnown RBP6.8□□□□□ -1.32
PTPRK-202ENST00000368205 MBLAC2Q68D91 279 aa6.8□□□□□ -1.32
PTPRK-202ENST00000368205 ETV3LQ6ZN32 361 aa6.8□□□□□ -1.32
PTPRK-202ENST00000368205 CLEC1BQ9P126 229 aa6.8□□□□□ -1.32
PTPRK-202ENST00000368205 AKT3Q9Y243 479 aa6.8□□□□□ -1.32
PTPRK-202ENST00000368205 EMC9Q9Y3B6 208 aa6.8□□□□□ -1.32
PTPRK-202ENST00000368205 SIT1Q9Y3P8 196 aa6.8□□□□□ -1.32
PTPRK-202ENST00000368205 PLATP00750 562 aa6.79□□□□□ -1.32
PTPRK-202ENST00000368205 PLS3P13797 630 aa6.79□□□□□ -1.32
PTPRK-202ENST00000368205 ZNF143P52747 638 aaPredicted RBP6.79□□□□□ -1.32
PTPRK-202ENST00000368205 FAM26FQ5R3K3 315 aa6.79□□□□□ -1.32
PTPRK-202ENST00000368205 KIAA1211LQ6NV74 962 aa6.79□□□□□ -1.32
PTPRK-202ENST00000368205 POMZP3Q6PJE2 187 aa6.79□□□□□ -1.32
PTPRK-202ENST00000368205 KYQ8NBH2 561 aa6.79□□□□□ -1.32
PTPRK-202ENST00000368205 DPF3Q92784 378 aa6.79□□□□□ -1.32
PTPRK-202ENST00000368205 SAMD11Q96NU1 681 aa6.79□□□□□ -1.32
PTPRK-202ENST00000368205 C1QTNF3Q9BXJ4 246 aa6.79□□□□□ -1.32
PTPRK-202ENST00000368205 KRTAP3-1Q9BYR8 98 aa6.79□□□□□ -1.32
PTPRK-202ENST00000368205 AP5M1Q9H0R1 490 aa6.79□□□□□ -1.32
PTPRK-202ENST00000368205 APEX2Q9UBZ4 518 aa6.79□□□□□ -1.32
PTPRK-202ENST00000368205 C1QTNF3-AMACRE9PGA6 284 aa6.78□□□□□ -1.32
PTPRK-202ENST00000368205 SLC6A11P48066 632 aa6.78□□□□□ -1.32
PTPRK-202ENST00000368205 SCRN1Q12765 414 aa6.78□□□□□ -1.32
PTPRK-202ENST00000368205 PPP2R5EQ16537 467 aa6.78□□□□□ -1.32
PTPRK-202ENST00000368205 TBC1D10BQ4KMP7 808 aaPredicted RBP6.78□□□□□ -1.32
PTPRK-202ENST00000368205 TMCO4Q5TGY1 634 aa6.78□□□□□ -1.32
PTPRK-202ENST00000368205 VHLLQ6RSH7 139 aa6.78□□□□□ -1.32
PTPRK-202ENST00000368205 BVESQ8NE79 360 aa6.78□□□□□ -1.32
PTPRK-202ENST00000368205 SEC14L1Q92503 715 aa6.78□□□□□ -1.32
PTPRK-202ENST00000368205 MARCH2Q9P0N8 246 aa6.78□□□□□ -1.32
PTPRK-202ENST00000368205 SGSM2O43147 1006 aa6.77□□□□□ -1.33
PTPRK-202ENST00000368205 KCNH1O95259 989 aa6.77□□□□□ -1.33
PTPRK-202ENST00000368205 NAT2P11245 290 aa6.77□□□□□ -1.33
PTPRK-202ENST00000368205 TNFRSF1AP19438 455 aa6.77□□□□□ -1.33
PTPRK-202ENST00000368205 KIAA2012Q0VF49 1180 aa6.77□□□□□ -1.33
PTPRK-202ENST00000368205 RGL3Q3MIN7 710 aa6.77□□□□□ -1.33
PTPRK-202ENST00000368205 PRR31Q5SQ13 230 aa6.77□□□□□ -1.33
PTPRK-202ENST00000368205 CPZQ66K79 652 aa6.77□□□□□ -1.33
PTPRK-202ENST00000368205 LGI4Q8N135 537 aa6.77□□□□□ -1.33
PTPRK-202ENST00000368205 TTLL6Q8N841 843 aa6.77□□□□□ -1.33
PTPRK-202ENST00000368205 APBA2Q99767 749 aa6.77□□□□□ -1.33
PTPRK-202ENST00000368205 KRTAP17-1Q9BYP8 105 aa6.77□□□□□ -1.33
PTPRK-202ENST00000368205 GPRC5CQ9NQ84 441 aa6.77□□□□□ -1.33
PTPRK-202ENST00000368205 THBDP07204 575 aa6.76□□□□□ -1.33
PTPRK-202ENST00000368205 NASPP49321 788 aaPredicted RBP6.76□□□□□ -1.33
PTPRK-202ENST00000368205 ZC3H18Q86VM9 953 aaKnown RBP6.76□□□□□ -1.33
PTPRK-202ENST00000368205 RIOX2Q8IUF8 465 aa6.76□□□□□ -1.33
PTPRK-202ENST00000368205 TRIM59Q8IWR1 403 aa6.76□□□□□ -1.33
PTPRK-202ENST00000368205 Q8N1Y9 231 aa6.76□□□□□ -1.33
PTPRK-202ENST00000368205 CYP26B1Q9NR63 512 aa6.76□□□□□ -1.33
PTPRK-202ENST00000368205 MROH6A6NGR9 719 aa6.75□□□□□ -1.33
PTPRK-202ENST00000368205 ITGA1P56199 1179 aa6.75□□□□□ -1.33
PTPRK-202ENST00000368205 INF2Q27J81 1249 aa6.75□□□□□ -1.33
PTPRK-202ENST00000368205 MROH9Q5TGP6 573 aa6.75□□□□□ -1.33
PTPRK-202ENST00000368205 IQCEQ6IPM2 695 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms