RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 CPLX2Q6PUV4 134 aaKnown RBP11.39□□□□□ -0.59
NUP43-202ENST00000367402 TMEM92Q6UXU6 159 aa11.39□□□□□ -0.59
NUP43-202ENST00000367402 ZNF687Q8N1G0 1237 aa11.39□□□□□ -0.59
NUP43-202ENST00000367402 MSL3Q8N5Y2 521 aaKnown RBP11.39□□□□□ -0.59
NUP43-202ENST00000367402 GPKOWQ92917 476 aaPredicted RBP eCLIP11.39□□□□□ -0.59
NUP43-202ENST00000367402 PHKBQ93100 1093 aa11.39□□□□□ -0.59
NUP43-202ENST00000367402 ZFP91Q96JP5 570 aaPredicted RBP11.39□□□□□ -0.59
NUP43-202ENST00000367402 SLC26A6Q9BXS9 759 aa11.39□□□□□ -0.59
NUP43-202ENST00000367402 MAF1Q9H063 256 aa11.39□□□□□ -0.59
NUP43-202ENST00000367402 ADD3Q9UEY8 706 aaKnown RBP11.39□□□□□ -0.59
NUP43-202ENST00000367402 LIMCH1Q9UPQ0 1083 aa11.39□□□□□ -0.59
NUP43-202ENST00000367402 CNPY2Q9Y2B0 182 aa11.39□□□□□ -0.59
NUP43-202ENST00000367402 NID2Q14112 1375 aa11.39□□□□□ -0.59
NUP43-202ENST00000367402 OPLAHO14841 1288 aa11.38□□□□□ -0.59
NUP43-202ENST00000367402 PRPF3O43395 683 aaKnown RBP11.38□□□□□ -0.59
NUP43-202ENST00000367402 PFKFB2O60825 505 aa11.38□□□□□ -0.59
NUP43-202ENST00000367402 IGHA2P01877 340 aa11.38□□□□□ -0.59
NUP43-202ENST00000367402 IFNAR1P17181 557 aa11.38□□□□□ -0.59
NUP43-202ENST00000367402 CCND3P30281 292 aaPredicted RBP11.38□□□□□ -0.59
NUP43-202ENST00000367402 HOXA13P31271 388 aaPredicted RBP11.38□□□□□ -0.59
NUP43-202ENST00000367402 HSD17B4P51659 736 aa11.38□□□□□ -0.59
NUP43-202ENST00000367402 SSRP1Q08945 709 aaKnown RBP11.38□□□□□ -0.59
NUP43-202ENST00000367402 SCRN1Q12765 414 aa11.38□□□□□ -0.59
NUP43-202ENST00000367402 NTRK3Q16288 839 aa11.38□□□□□ -0.59
NUP43-202ENST00000367402 ME3Q16798 604 aa11.38□□□□□ -0.59
NUP43-202ENST00000367402 MAP3K21Q5TCX8 1036 aa11.38□□□□□ -0.59
NUP43-202ENST00000367402 WWC2Q6AWC2 1192 aa11.38□□□□□ -0.59
NUP43-202ENST00000367402 MAMDC4Q6UXC1 1216 aa11.38□□□□□ -0.59
NUP43-202ENST00000367402 ARMCX2Q7L311 632 aa11.38□□□□□ -0.59
NUP43-202ENST00000367402 TRIM22Q8IYM9 498 aa11.38□□□□□ -0.59
NUP43-202ENST00000367402 NECAB1Q8N987 351 aa11.38□□□□□ -0.59
NUP43-202ENST00000367402 SYTL5Q8TDW5 730 aaPredicted RBP11.38□□□□□ -0.59
NUP43-202ENST00000367402 CUL5Q93034 780 aa11.38□□□□□ -0.59
NUP43-202ENST00000367402 FGD4Q96M96 766 aa11.38□□□□□ -0.59
NUP43-202ENST00000367402 DEFB118Q96PH6 123 aa11.38□□□□□ -0.59
NUP43-202ENST00000367402 PSTPIP2Q9H939 334 aa11.38□□□□□ -0.59
NUP43-202ENST00000367402 RBM27Q9P2N5 1060 aaKnown RBP11.38□□□□□ -0.59
NUP43-202ENST00000367402 SYNGAP1Q96PV0 1343 aa11.37□□□□□ -0.59
NUP43-202ENST00000367402 CDKL5O76039 1030 aa11.37□□□□□ -0.59
NUP43-202ENST00000367402 SNAI1O95863 264 aaPredicted RBP11.37□□□□□ -0.59
NUP43-202ENST00000367402 CYBAP13498 195 aa11.37□□□□□ -0.59
NUP43-202ENST00000367402 ALDH5A1P51649 535 aaPredicted RBP11.37□□□□□ -0.59
NUP43-202ENST00000367402 NAPAP54920 295 aa11.37□□□□□ -0.59
NUP43-202ENST00000367402 SOX10P56693 466 aa11.37□□□□□ -0.59
NUP43-202ENST00000367402 PFKFB3Q16875 520 aaPredicted RBP11.37□□□□□ -0.59
NUP43-202ENST00000367402 ARHGEF16Q5VV41 709 aa11.37□□□□□ -0.59
NUP43-202ENST00000367402 FCHSD1Q86WN1 690 aa11.37□□□□□ -0.59
NUP43-202ENST00000367402 SAMD3Q8N6K7 520 aa11.37□□□□□ -0.59
NUP43-202ENST00000367402 TRPV1Q8NER1 839 aa11.37□□□□□ -0.59
NUP43-202ENST00000367402 DNERQ8NFT8 737 aa11.37□□□□□ -0.59
NUP43-202ENST00000367402 SMARCC2Q8TAQ2 1214 aa11.37□□□□□ -0.59
NUP43-202ENST00000367402 NSUN6Q8TEA1 469 aaKnown RBP11.37□□□□□ -0.59
NUP43-202ENST00000367402 TAAR1Q96RJ0 339 aa11.37□□□□□ -0.59
NUP43-202ENST00000367402 RMDN3Q96TC7 470 aa11.37□□□□□ -0.59
NUP43-202ENST00000367402 MPHOSPH6Q99547 160 aaKnown RBP11.37□□□□□ -0.59
NUP43-202ENST00000367402 RNF26Q9BY78 433 aaPredicted RBP11.37□□□□□ -0.59
NUP43-202ENST00000367402 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.37□□□□□ -0.59
NUP43-202ENST00000367402 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.37□□□□□ -0.59
NUP43-202ENST00000367402 MAP3K20Q9NYL2 800 aaKnown RBP11.37□□□□□ -0.59
NUP43-202ENST00000367402 COL20A1Q9P218 1284 aa11.37□□□□□ -0.59
NUP43-202ENST00000367402 NRBP1Q9UHY1 535 aa11.37□□□□□ -0.59
NUP43-202ENST00000367402 ZHX1Q9UKY1 873 aaPredicted RBP11.37□□□□□ -0.59
NUP43-202ENST00000367402 DDX49Q9Y6V7 483 aaKnown RBP11.37□□□□□ -0.59
NUP43-202ENST00000367402 HTTP42858 3142 aa11.37□□□□□ -0.59
NUP43-202ENST00000367402 PLXNB2O15031 1838 aa11.37□□□□□ -0.59
NUP43-202ENST00000367402 ASTN1O14525 1302 aa11.36□□□□□ -0.59
NUP43-202ENST00000367402 SMCO2A6NFE2 343 aa11.36□□□□□ -0.59
NUP43-202ENST00000367402 B4DLN1 442 aa11.36□□□□□ -0.59
NUP43-202ENST00000367402 hCG_1984214I3L0E3 225 aa11.36□□□□□ -0.59
NUP43-202ENST00000367402 LARGE1O95461 756 aa11.36□□□□□ -0.59
NUP43-202ENST00000367402 TFRCP02786 760 aaKnown RBP11.36□□□□□ -0.59
NUP43-202ENST00000367402 GJB1P08034 283 aa11.36□□□□□ -0.59
NUP43-202ENST00000367402 SCG2P13521 617 aa11.36□□□□□ -0.59
NUP43-202ENST00000367402 MRPL12P52815 198 aaKnown RBP11.36□□□□□ -0.59
NUP43-202ENST00000367402 PDE4DQ08499 809 aa11.36□□□□□ -0.59
NUP43-202ENST00000367402 USP17L6PQ6QN14 398 aa11.36□□□□□ -0.59
NUP43-202ENST00000367402 EEPD1Q7L9B9 569 aa11.36□□□□□ -0.59
NUP43-202ENST00000367402 ZNF713Q8N859 430 aaPredicted RBP11.36□□□□□ -0.59
NUP43-202ENST00000367402 U2AF1L4Q8WU68 220 aaKnown RBP11.36□□□□□ -0.59
NUP43-202ENST00000367402 ZSCAN31Q96LW9 406 aaPredicted RBP11.36□□□□□ -0.59
NUP43-202ENST00000367402 ABHD16BQ9H3Z7 469 aa11.36□□□□□ -0.59
NUP43-202ENST00000367402 PAK6Q9NQU5 681 aaPredicted RBP11.36□□□□□ -0.59
NUP43-202ENST00000367402 BARHL2Q9NY43 387 aa11.36□□□□□ -0.59
NUP43-202ENST00000367402 ZNF236Q9UL36 1845 aa11.36□□□□□ -0.59
NUP43-202ENST00000367402 DOCK3Q8IZD9 2030 aa11.35□□□□□ -0.59
NUP43-202ENST00000367402 LOC102724159A0A0B4J2E5 919 aa11.35□□□□□ -0.59
NUP43-202ENST00000367402 STXBP3O00186 592 aa11.35□□□□□ -0.59
NUP43-202ENST00000367402 MEIS2O14770 477 aa11.35□□□□□ -0.59
NUP43-202ENST00000367402 DEXIO95424 95 aa11.35□□□□□ -0.59
NUP43-202ENST00000367402 SGPL1O95470 568 aa11.35□□□□□ -0.59
NUP43-202ENST00000367402 ZNF865P0CJ78 1059 aaPredicted RBP11.35□□□□□ -0.59
NUP43-202ENST00000367402 EIF2AK2P19525 551 aaKnown RBP11.35□□□□□ -0.59
NUP43-202ENST00000367402 ADCY7P51828 1080 aa11.35□□□□□ -0.59
NUP43-202ENST00000367402 GHRHRQ02643 423 aa11.35□□□□□ -0.59
NUP43-202ENST00000367402 ACVR2BQ13705 512 aa11.35□□□□□ -0.59
NUP43-202ENST00000367402 PWP2Q15269 919 aaKnown RBP11.35□□□□□ -0.59
NUP43-202ENST00000367402 PKN1Q16512 942 aa11.35□□□□□ -0.59
NUP43-202ENST00000367402 GPR153Q6NV75 609 aa11.35□□□□□ -0.59
NUP43-202ENST00000367402 PPP1R18Q6NYC8 613 aa11.35□□□□□ -0.59
NUP43-202ENST00000367402 IL27Q8NEV9 243 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms