RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 TMEM191BP0C7N4 346 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 DMP1Q13316 513 aaPredicted RBP12.74□□□□□ -0.37
SYNE1-204ENST00000367248 RETREG2Q8NC44 543 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 IFT81Q8WYA0 676 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 RHOXF2Q9BQY4 288 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 CNOT7Q9UIV1 285 aaKnown RBP12.74□□□□□ -0.37
SYNE1-204ENST00000367248 RCOR1Q9UKL0 485 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 MEIS1O00470 390 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 N4BP1O75113 896 aaKnown RBP12.74□□□□□ -0.37
SYNE1-204ENST00000367248 TNNC2P02585 160 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 STAT1P42224 750 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 TFDP1Q14186 410 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 UBE2SQ16763 222 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 IPO4Q8TEX9 1081 aaKnown RBP12.74□□□□□ -0.37
SYNE1-204ENST00000367248 ZNF668Q96K58 619 aaPredicted RBP12.74□□□□□ -0.37
SYNE1-204ENST00000367248 RIPOR2Q9Y4F9 1068 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 FAM83BQ5T0W9 1011 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 SPATA1Q5VX52 437 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 RFX7Q2KHR2 1363 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.74□□□□□ -0.37
SYNE1-204ENST00000367248 SRGAP2CP0DJJ0 459 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 ITKQ08881 620 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 GEN1Q17RS7 908 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 LONRF3Q496Y0 759 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 OR8K1Q8NGG5 319 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 PPANQ9NQ55 473 aaKnown RBP12.74□□□□□ -0.37
SYNE1-204ENST00000367248 OPA1O60313 960 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 ALX1Q15699 326 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 ATG9AQ7Z3C6 839 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 NOP9Q86U38 636 aaKnown RBP12.74□□□□□ -0.37
SYNE1-204ENST00000367248 UBL4BQ8N7F7 174 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 NSMCE1Q8WV22 266 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 SLFN14P0C7P3 912 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 ATP2A2P16615 1042 aaKnown RBP12.74□□□□□ -0.37
SYNE1-204ENST00000367248 AIFM3Q96NN9 605 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 LSM14BQ9BX40 385 aaKnown RBP12.74□□□□□ -0.37
SYNE1-204ENST00000367248 ABCC12Q96J65 1359 aa12.74□□□□□ -0.37
SYNE1-204ENST00000367248 SEPT2Q15019 361 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 MICALCLQ6ZW33 695 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 CCDC26Q8TAB7 109 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 STMN4Q9H169 189 aaPredicted RBP12.73□□□□□ -0.37
SYNE1-204ENST00000367248 UTYO14607 1347 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 HNRNPDLO14979 420 aaKnown RBP12.73□□□□□ -0.37
SYNE1-204ENST00000367248 CCND2P30279 289 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 GBP6Q6ZN66 633 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 CCDC125Q86Z20 511 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 SLC44A5Q8NCS7 719 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 SREK1Q8WXA9 508 aaKnown RBP12.73□□□□□ -0.37
SYNE1-204ENST00000367248 KIF9Q9HAQ2 790 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 PLEKHA8P1O95397 391 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 ERCC5P28715 1186 aaPredicted RBP12.73□□□□□ -0.37
SYNE1-204ENST00000367248 DCAF4Q8WV16 495 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 POMGNT1Q8WZA1 660 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 NLRP4Q96MN2 994 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 C1orf112Q9NSG2 853 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 LRRC7Q96NW7 1537 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 TNPO2O14787 897 aaKnown RBP12.73□□□□□ -0.37
SYNE1-204ENST00000367248 DPEP1P16444 411 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 ZNF365Q70YC5 407 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 RAB3IL1Q8TBN0 382 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 NACC1Q96RE7 527 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 STK17AQ9UEE5 414 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 OATP04181 439 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 TBC1D16Q8TBP0 767 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 KIAA1524Q8TCG1 905 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 FANCLQ9NW38 375 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 HACL1Q9UJ83 578 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 HOXD10P28358 340 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 CEP170P1Q96L14 293 aa12.73□□□□□ -0.37
SYNE1-204ENST00000367248 CD163L1Q9NR16 1453 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 TYW1BQ6NUM6 668 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 MXD3Q9BW11 206 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 ODF2LQ9ULJ1 636 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 TLDC2A0PJX2 215 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 TAF1CQ15572 869 aaPredicted RBP12.72□□□□□ -0.37
SYNE1-204ENST00000367248 PTPROQ16827 1216 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 MICALL1Q8N3F8 863 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 TIGD1Q96MW7 591 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 CPVLQ9H3G5 476 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 ABCA6Q8N139 1617 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 CELF2O95319 508 aaKnown RBP12.72□□□□□ -0.37
SYNE1-204ENST00000367248 ITPK1Q13572 414 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 LINC00116Q8NCU8 138 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 BNIP3LO60238 219 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 GAP43P17677 238 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 HUNKP57058 714 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 PPP2R3AQ06190 1150 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 TUBB2AQ13885 445 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 SLC17A8Q8NDX2 589 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 TUBB2BQ9BVA1 445 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 STIM2Q9P246 746 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 TECPR2O15040 1411 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 PPARDQ03181 441 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 SCARF1Q14162 830 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 MIS18BP1Q6P0N0 1132 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 FBXO40Q9UH90 709 aa12.72□□□□□ -0.37
SYNE1-204ENST00000367248 CEP104O60308 925 aa12.71□□□□□ -0.37
SYNE1-204ENST00000367248 COBLO75128 1261 aa12.71□□□□□ -0.37
SYNE1-204ENST00000367248 AP3B2Q13367 1082 aa12.71□□□□□ -0.37
SYNE1-204ENST00000367248 RNF187Q5TA31 235 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms