RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 KCTD1Q719H9 257 aa12.56□□□□□ -0.4
RD3-201ENST00000367002 K7ENM7 598 aa12.56□□□□□ -0.4
RD3-201ENST00000367002 ENAHQ8N8S7 591 aaPredicted RBP12.56□□□□□ -0.4
RD3-201ENST00000367002 MAGOHBQ96A72 148 aaKnown RBP12.56□□□□□ -0.4
RD3-201ENST00000367002 PICK1Q9NRD5 415 aa12.56□□□□□ -0.4
RD3-201ENST00000367002 STK36Q9NRP7 1315 aa12.56□□□□□ -0.4
RD3-201ENST00000367002 RFX7Q2KHR2 1363 aa12.56□□□□□ -0.4
RD3-201ENST00000367002 TSPOAP1O95153 1857 aa12.56□□□□□ -0.4
RD3-201ENST00000367002 CCDC160A6NGH7 325 aa12.56□□□□□ -0.4
RD3-201ENST00000367002 POLR2MP0CAP2 368 aa12.56□□□□□ -0.4
RD3-201ENST00000367002 GCFC2P16383 781 aaKnown RBP12.56□□□□□ -0.4
RD3-201ENST00000367002 ZNF131P52739 623 aa12.56□□□□□ -0.4
RD3-201ENST00000367002 MRPS25P82663 173 aaKnown RBP12.56□□□□□ -0.4
RD3-201ENST00000367002 ZNF354CQ86Y25 554 aa12.56□□□□□ -0.4
RD3-201ENST00000367002 SPICE1Q8N0Z3 855 aa12.56□□□□□ -0.4
RD3-201ENST00000367002 FAM133AQ8N9E0 248 aa12.56□□□□□ -0.4
RD3-201ENST00000367002 VPS37BQ9H9H4 285 aa12.56□□□□□ -0.4
RD3-201ENST00000367002 WDR19Q8NEZ3 1342 aa12.56□□□□□ -0.4
RD3-201ENST00000367002 TESPA1A2RU30 521 aaPredicted RBP12.55□□□□□ -0.4
RD3-201ENST00000367002 TRIM49BA6NDI0 452 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 ZBED4O75132 1171 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 TTLL1O95922 423 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 ALAS1P13196 640 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 PRDX5P30044 214 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 ADCY8P40145 1251 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 FOXO4P98177 505 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 SLC7A5Q01650 507 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 CC2D1AQ6P1N0 951 aaPredicted RBP12.55□□□□□ -0.4
RD3-201ENST00000367002 ATG9AQ7Z3C6 839 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 SGMS1Q86VZ5 419 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 TTC16Q8NEE8 873 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 ARHGEF2Q92974 986 aaKnown RBP12.55□□□□□ -0.4
RD3-201ENST00000367002 BRIP1Q9BX63 1249 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 EMILIN3Q9NT22 766 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 ADGRG1Q9Y653 693 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 PRR29P0C7W0 189 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 DLATP10515 647 aaKnown RBP12.55□□□□□ -0.4
RD3-201ENST00000367002 NEDD9Q14511 834 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 MESDQ14696 234 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 LLGL1Q15334 1064 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 XKR9Q5GH70 373 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 ISCA1Q9BUE6 129 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.55□□□□□ -0.4
RD3-201ENST00000367002 RNF14Q9UBS8 474 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 TULP4Q9NRJ4 1543 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 ALKQ9UM73 1620 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 GSG1L2A8MUP6 293 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 CLIC2O15247 247 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 CLNS1AP54105 237 aaKnown RBP12.55□□□□□ -0.4
RD3-201ENST00000367002 CFAP157Q5JU67 520 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 FAM102BQ5T8I3 360 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 DPF2Q92785 391 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 PPP1R12CQ9BZL4 782 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 CPVLQ9H3G5 476 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 ABHD10Q9NUJ1 306 aa12.55□□□□□ -0.4
RD3-201ENST00000367002 MRPL11Q9Y3B7 192 aaKnown RBP12.55□□□□□ -0.4
RD3-201ENST00000367002 PPIP5K2O43314 1243 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 CYP2D6P10635 497 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 ARL1P40616 181 aaPredicted RBP12.54□□□□□ -0.4
RD3-201ENST00000367002 IFT88Q13099 833 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 ALX1Q15699 326 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 MCUR1Q96AQ8 359 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 PCDHA13Q9Y5I0 950 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 GJA3Q9Y6H8 435 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 MEIS1O00470 390 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 ECM2O94769 699 aaPredicted RBP12.54□□□□□ -0.4
RD3-201ENST00000367002 PRCPP42785 496 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 IFNAR2P48551 515 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 FAM186BQ8IYM0 893 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 CCDC97Q96F63 343 aaPredicted RBP12.54□□□□□ -0.4
RD3-201ENST00000367002 USP31Q70CQ4 1352 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 LGALS16A8MUM7 142 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 PGRMC1O00264 195 aaKnown RBP12.54□□□□□ -0.4
RD3-201ENST00000367002 AFPP02771 609 aaKnown RBP12.54□□□□□ -0.4
RD3-201ENST00000367002 LRCH2Q5VUJ6 765 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 ANKRD20A3Q5VUR7 823 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 E4F1Q66K89 784 aaPredicted RBP12.54□□□□□ -0.4
RD3-201ENST00000367002 SPATS2Q86XZ4 545 aaKnown RBP12.54□□□□□ -0.4
RD3-201ENST00000367002 BSDC1Q9NW68 430 aaPredicted RBP12.54□□□□□ -0.4
RD3-201ENST00000367002 DAAM1Q9Y4D1 1078 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 NPHP4O75161 1426 aaPredicted RBP12.54□□□□□ -0.4
RD3-201ENST00000367002 ABCA6Q8N139 1617 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 NOP56O00567 594 aaKnown RBP12.54□□□□□ -0.4
RD3-201ENST00000367002 SRGAP2O75044 1071 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 N4BP1O75113 896 aaKnown RBP12.54□□□□□ -0.4
RD3-201ENST00000367002 LRRN2O75325 713 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 KRT19P08727 400 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 HSPA1LP34931 641 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 ABCB5Q2M3G0 1257 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 USP21Q9UK80 565 aa12.54□□□□□ -0.4
RD3-201ENST00000367002 ADGRL3Q9HAR2 1447 aa12.53□□□□□ -0.4
RD3-201ENST00000367002 LAMC1P11047 1609 aa12.53□□□□□ -0.4
RD3-201ENST00000367002 TRIM28Q13263 835 aaKnown RBP12.53□□□□□ -0.4
RD3-201ENST00000367002 OTUD6AQ7L8S5 288 aa12.53□□□□□ -0.4
RD3-201ENST00000367002 APBB1IPQ7Z5R6 666 aaPredicted RBP12.53□□□□□ -0.4
RD3-201ENST00000367002 IRX2Q9BZI1 471 aaPredicted RBP12.53□□□□□ -0.4
RD3-201ENST00000367002 KLHL14Q9P2G3 628 aa12.53□□□□□ -0.4
RD3-201ENST00000367002 STK38LQ9Y2H1 464 aa12.53□□□□□ -0.4
RD3-201ENST00000367002 ATP8A1Q9Y2Q0 1164 aa12.53□□□□□ -0.4
RD3-201ENST00000367002 SPHKAPQ2M3C7 1700 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms