RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 SART1O43290 800 aaKnown RBP4.5□□□□□ -1.69
USH2A-202ENST00000366942 BRPF1P55201 1214 aaPredicted RBP4.5□□□□□ -1.69
USH2A-202ENST00000366942 TBCCQ15814 346 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 AASDHQ4L235 1098 aaPredicted RBP4.5□□□□□ -1.69
USH2A-202ENST00000366942 CEP85Q6P2H3 762 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 HAUS1Q96CS2 278 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 FAM81BQ96LP2 452 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 TRAIPQ9BWF2 469 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 ECT2Q9H8V3 914 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 SLC13A4Q9UKG4 626 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 ZNF711Q9Y462 761 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 PCDHB3Q9Y5E6 796 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 ABCA10Q8WWZ4 1543 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 UBE2Q2LH0YL09 131 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 HMGCRP04035 888 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 RPIAP49247 311 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 IFRD2Q12894 506 aaPredicted RBP4.5□□□□□ -1.69
USH2A-202ENST00000366942 PAK2Q13177 524 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 KCNB1Q14721 858 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 TRIP10Q15642 601 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 FAM43BQ6ZT52 329 aaPredicted RBP4.5□□□□□ -1.69
USH2A-202ENST00000366942 OTOP3Q7RTS5 596 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 KDELC2Q7Z4H8 507 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 SCFD2Q8WU76 684 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 CHMP6Q96FZ7 201 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 EXO5Q9H790 373 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 CFAP74Q9C0B2 1584 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 IBTKQ9P2D0 1353 aaPredicted RBP4.5□□□□□ -1.69
USH2A-202ENST00000366942 TMEM247A6NEH6 219 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 ZSCAN5CA6NGD5 496 aaPredicted RBP4.5□□□□□ -1.69
USH2A-202ENST00000366942 GPR182O15218 404 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 DYNC1LI2O43237 492 aaPredicted RBP4.5□□□□□ -1.69
USH2A-202ENST00000366942 FGF19O95750 216 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 PCP11498 1178 aaKnown RBP4.5□□□□□ -1.69
USH2A-202ENST00000366942 AVPR1AP37288 418 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 TSTA3Q13630 321 aaPredicted RBP4.5□□□□□ -1.69
USH2A-202ENST00000366942 COG2Q14746 738 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 NCAPHQ15003 741 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 TMEM179Q6ZVK1 233 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 TRIM50Q86XT4 487 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 AFG1LQ8WV93 481 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 WDR11Q9BZH6 1224 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 FOXP3Q9BZS1 431 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 C2orf40Q9H1Z8 148 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 E7EVH7 732 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 DLX3O60479 287 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 ZNF189O75820 626 aaPredicted RBP4.5□□□□□ -1.69
USH2A-202ENST00000366942 KLRC2P26717 231 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 OXCT1P55809 520 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 KIF23Q02241 960 aaPredicted RBP4.5□□□□□ -1.69
USH2A-202ENST00000366942 RCN2Q14257 317 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 SV2BQ7L1I2 683 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 KRT25Q7Z3Z0 450 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 SPATA18Q8TC71 538 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 LPAR1Q92633 364 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 ANKRD36BP1Q96IX9 119 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 C8orf76Q96K31 380 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 MMS19Q96T76 1030 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 C11orf84Q9BUA3 381 aaPredicted RBP4.5□□□□□ -1.69
USH2A-202ENST00000366942 NDEL1Q9GZM8 345 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 TLE6Q9H808 572 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 SLC38A10Q9HBR0 1119 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 UBN1Q9NPG3 1134 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 PCDHGB3Q9Y5G1 929 aa4.5□□□□□ -1.69
USH2A-202ENST00000366942 CDHR2Q9BYE9 1310 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 PDE2AO00408 941 aaPredicted RBP4.49□□□□□ -1.69
USH2A-202ENST00000366942 MPOP05164 745 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 BMP3P12645 472 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 AKT1P31749 480 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 ME1P48163 572 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 DUSP3P51452 185 aaPredicted RBP4.49□□□□□ -1.69
USH2A-202ENST00000366942 MECOMQ03112 1051 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 CCINQ13939 588 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 HSP90B2PQ58FF3 399 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 JAKMIP2Q96AA8 810 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 KCNS3Q9BQ31 491 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 CREBZFQ9NS37 354 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 SPACA6W5XKT8 324 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 ZBTB43O43298 467 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 DDAH1O94760 285 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 MTIF2P46199 727 aaKnown RBP4.49□□□□□ -1.69
USH2A-202ENST00000366942 LBX1P52954 281 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 SPP2Q13103 211 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 CUL1Q13616 776 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 TTBK2Q6IQ55 1244 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 TAOK1Q7L7X3 1001 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 JAMLQ86YT9 394 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 FAM177A1Q8N128 213 aaPredicted RBP4.49□□□□□ -1.69
USH2A-202ENST00000366942 SERPINB13Q9UIV8 391 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 ABCA8O94911 1581 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 ANKRD36BQ8N2N9 1353 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 H7C1W4 665 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 PSMD14O00487 310 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 RPS6KA5O75582 802 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 RASGRP1O95267 797 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 APOEP02649 317 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 PDIA3P30101 505 aaKnown RBP4.49□□□□□ -1.69
USH2A-202ENST00000366942 HOXC9P31274 260 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 EPHB3P54753 998 aa4.49□□□□□ -1.69
USH2A-202ENST00000366942 SARNPP82979 210 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms