RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 ATP1A3P13637 1013 aa10.55□□□□□ -0.72
CNIH4-202ENST00000366857 LMNB1P20700 586 aa10.55□□□□□ -0.72
CNIH4-202ENST00000366857 GNA11P29992 359 aa10.55□□□□□ -0.72
CNIH4-202ENST00000366857 ADCY7P51828 1080 aa10.55□□□□□ -0.72
CNIH4-202ENST00000366857 ZNF131P52739 623 aa10.55□□□□□ -0.72
CNIH4-202ENST00000366857 UBE2SQ16763 222 aa10.55□□□□□ -0.72
CNIH4-202ENST00000366857 BMT2Q1RMZ1 405 aa10.55□□□□□ -0.72
CNIH4-202ENST00000366857 JMYQ8N9B5 988 aa10.55□□□□□ -0.72
CNIH4-202ENST00000366857 LPAR1Q92633 364 aa10.55□□□□□ -0.72
CNIH4-202ENST00000366857 SYT17Q9BSW7 474 aa10.55□□□□□ -0.72
CNIH4-202ENST00000366857 FGFBP2Q9BYJ0 223 aa10.55□□□□□ -0.72
CNIH4-202ENST00000366857 GCFC2P16383 781 aaKnown RBP10.55□□□□□ -0.72
CNIH4-202ENST00000366857 EDNRBP24530 442 aa10.55□□□□□ -0.72
CNIH4-202ENST00000366857 NFIL3Q16649 462 aa10.55□□□□□ -0.72
CNIH4-202ENST00000366857 ZNF658Q5TYW1 1059 aaPredicted RBP10.55□□□□□ -0.72
CNIH4-202ENST00000366857 CENPPQ6IPU0 288 aa10.55□□□□□ -0.72
CNIH4-202ENST00000366857 REXO1Q8N1G1 1221 aaKnown RBP10.55□□□□□ -0.72
CNIH4-202ENST00000366857 RNF225M0QZC1 329 aaPredicted RBP10.54□□□□□ -0.72
CNIH4-202ENST00000366857 MSH4O15457 936 aa10.54□□□□□ -0.72
CNIH4-202ENST00000366857 OAZ1P54368 228 aa10.54□□□□□ -0.72
CNIH4-202ENST00000366857 EIF6P56537 245 aaKnown RBP10.54□□□□□ -0.72
CNIH4-202ENST00000366857 NLRP5P59047 1200 aa10.54□□□□□ -0.72
CNIH4-202ENST00000366857 KIF4BQ2VIQ3 1234 aa10.54□□□□□ -0.72
CNIH4-202ENST00000366857 SCYL3Q8IZE3 742 aa10.54□□□□□ -0.72
CNIH4-202ENST00000366857 ANO10Q9NW15 660 aa10.54□□□□□ -0.72
CNIH4-202ENST00000366857 BIN2Q9UBW5 565 aaPredicted RBP10.54□□□□□ -0.72
CNIH4-202ENST00000366857 NENFQ9UMX5 172 aa10.54□□□□□ -0.72
CNIH4-202ENST00000366857 WDR46O15213 610 aaKnown RBP10.54□□□□□ -0.72
CNIH4-202ENST00000366857 MUTP22033 750 aa10.54□□□□□ -0.72
CNIH4-202ENST00000366857 MCTP2Q6DN12 878 aa10.54□□□□□ -0.72
CNIH4-202ENST00000366857 GPAT2Q6NUI2 795 aa10.54□□□□□ -0.72
CNIH4-202ENST00000366857 LRRC55Q6ZSA7 311 aa10.54□□□□□ -0.72
CNIH4-202ENST00000366857 MLKLQ8NB16 471 aa10.54□□□□□ -0.72
CNIH4-202ENST00000366857 BICD2Q8TD16 824 aa10.54□□□□□ -0.72
CNIH4-202ENST00000366857 C6orf50Q9HD87 102 aa10.54□□□□□ -0.72
CNIH4-202ENST00000366857 TSC2P49815 1807 aa10.54□□□□□ -0.72
CNIH4-202ENST00000366857 ITGB5P18084 799 aa10.54□□□□□ -0.72
CNIH4-202ENST00000366857 HOXA7P31268 230 aaPredicted RBP10.54□□□□□ -0.72
CNIH4-202ENST00000366857 HEATR3Q7Z4Q2 680 aa10.54□□□□□ -0.72
CNIH4-202ENST00000366857 AMOTL1Q8IY63 956 aa10.54□□□□□ -0.72
CNIH4-202ENST00000366857 RWDD2AQ9UIY3 292 aa10.54□□□□□ -0.72
CNIH4-202ENST00000366857 NPHP1O15259 732 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 MED24O75448 989 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 VCAM1P19320 739 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 TRIM29Q14134 588 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 LDLRAD1Q5T700 205 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 RBM26Q5T8P6 1007 aaKnown RBP10.53□□□□□ -0.72
CNIH4-202ENST00000366857 VSTM4Q8IW00 320 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 CYP2W1Q8TAV3 490 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 PPP1R9AQ9ULJ8 1098 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 IGKV6D-21A0A0A0MT36 114 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 A0A0G2JLL6 359 aaPredicted RBP10.53□□□□□ -0.72
CNIH4-202ENST00000366857 MYMKA6NI61 221 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 USP17L15C9J2P7 530 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 USP17L13C9JLJ4 530 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 USP17L11C9JVI0 530 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 USP17L18D6R9N7 530 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 USP17L22D6RA61 530 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 USP17L17D6RBQ6 530 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 USP17L19D6RCP7 530 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 USP17L20D6RJB6 530 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 XBP1P17861 261 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 EPS15P42566 896 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 USP17L24Q0WX57 530 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 KANK3Q6NY19 840 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 USP17L6PQ6QN14 398 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 CATSPERGQ6ZRH7 1159 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 PRRT2Q7Z6L0 340 aaPredicted RBP10.53□□□□□ -0.72
CNIH4-202ENST00000366857 CACTINQ8WUQ7 758 aaKnown RBP10.53□□□□□ -0.72
CNIH4-202ENST00000366857 PIBF1Q8WXW3 757 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 CUL5Q93034 780 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 POLR3CQ9BUI4 534 aaPredicted RBP10.53□□□□□ -0.72
CNIH4-202ENST00000366857 SEMA6BQ9H3T3 888 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 R3HDMLQ9H3Y0 253 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 PYCARDQ9ULZ3 195 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 EML1O00423 815 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 MCM7P33993 719 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 GJA5P36382 358 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 FAM83BQ5T0W9 1011 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 ZSCAN30Q86W11 494 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 LRRC8AQ8IWT6 810 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 CCDC12Q8WUD4 166 aaPredicted RBP10.53□□□□□ -0.72
CNIH4-202ENST00000366857 RAD54LQ92698 747 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 ANO3Q9BYT9 981 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 IMPACTQ9P2X3 320 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 ABCB11O95342 1321 aa10.53□□□□□ -0.72
CNIH4-202ENST00000366857 POTEFA5A3E0 1075 aa10.52□□□□□ -0.72
CNIH4-202ENST00000366857 VWA3AA6NCI4 1184 aa10.52□□□□□ -0.72
CNIH4-202ENST00000366857 NEMFO60524 1076 aa10.52□□□□□ -0.72
CNIH4-202ENST00000366857 PLCG1P19174 1290 aa10.52□□□□□ -0.72
CNIH4-202ENST00000366857 STAT2P52630 851 aa10.52□□□□□ -0.72
CNIH4-202ENST00000366857 MAPK7Q13164 816 aa10.52□□□□□ -0.72
CNIH4-202ENST00000366857 KARSQ15046 597 aaKnown RBP10.52□□□□□ -0.72
CNIH4-202ENST00000366857 CCDC96Q2M329 555 aa10.52□□□□□ -0.72
CNIH4-202ENST00000366857 MUM1L1Q5H9M0 696 aa10.52□□□□□ -0.72
CNIH4-202ENST00000366857 GLT8D2Q9H1C3 349 aa10.52□□□□□ -0.72
CNIH4-202ENST00000366857 GPCPD1Q9NPB8 672 aa10.52□□□□□ -0.72
CNIH4-202ENST00000366857 RTN4Q9NQC3 1192 aaKnown RBP10.52□□□□□ -0.72
CNIH4-202ENST00000366857 USP20Q9Y2K6 914 aa10.52□□□□□ -0.72
CNIH4-202ENST00000366857 RIPK3Q9Y572 518 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms