RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 UGGT2Q9NYU1 1516 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 ZYXQ15942 572 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 TRIM56Q9BRZ2 755 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 STRIP2Q9ULQ0 834 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 CC2D2BQ6DHV5 1058 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 PLA2G4DQ86XP0 818 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 GPR101Q96P66 508 aaPredicted RBP11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 RTL9Q8NET4 1388 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 SLC4A1P02730 911 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 CYLC2Q14093 348 aaPredicted RBP11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 ZNF804AQ7Z570 1209 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 MIGA1Q8NAN2 632 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 KCNH5Q8NCM2 988 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 MAIP1Q8WWC4 291 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 CYFIP2Q96F07 1278 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 ATP6V1G3Q96LB4 118 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 ATL3Q6DD88 541 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 IQUBQ8NA54 791 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 U2AF1L4Q8WU68 220 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 TTC1Q99614 292 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 AQRO60306 1485 aaKnown RBP eCLIP11.99□□□□□ -0.491e-6■■■■■ 27.7
CDC42BPA-205ENST00000366769 DDHD2O94830 711 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 SLC9A5Q14940 896 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 RSAD2Q8WXG1 361 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 DBF4Q9UBU7 674 aaPredicted RBP11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 GMNCA6NCL1 334 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 IFNB1P01574 187 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 GSPT1P15170 499 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 ORC6Q9Y5N6 252 aa11.99□□□□□ -0.49
CDC42BPA-205ENST00000366769 ZBED2Q9BTP6 218 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 NLRC4Q9NPP4 1024 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 DIDO1Q9BTC0 2240 aaKnown RBP11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 ITSN2Q9NZM3 1697 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 SYCE1Q8N0S2 351 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 OMA1Q96E52 524 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 ANKRD2Q9GZV1 360 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 LMNB2Q03252 620 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 TGS1Q96RS0 853 aaKnown RBP11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 KLHL25Q9H0H3 589 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 SMYD2Q9NRG4 433 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 BRDTQ58F21 947 aaPredicted RBP11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 ARMCX5Q6P1M9 558 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 MIEF2Q96C03 454 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 LETM2Q2VYF4 491 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 TMTC2Q8N394 836 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 AP1M1Q9BXS5 423 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 INSRP06213 1382 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 DAB2P98082 770 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 ARHGAP4P98171 946 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 KCNB1Q14721 858 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 SLC9C1Q4G0N8 1177 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 SOS1Q07889 1333 aaPredicted RBP11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 CYTH1Q15438 398 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 HEATR4Q86WZ0 1026 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 ZRANB2O95218 330 aaKnown RBP eCLIP11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 NOP14P78316 857 aaKnown RBP11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 DTX3LQ8TDB6 740 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 ZNF473Q8WTR7 871 aaKnown RBP11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 HIC2Q96JB3 615 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 TESK2Q96S53 571 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 VCPKMTQ9H867 229 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 BATF3Q9NR55 127 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 SYCP2Q9BX26 1530 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 PPP2R2AP63151 447 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 LRRC36Q1X8D7 754 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 LRRN4CLQ8ND94 238 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 GID8Q9NWU2 228 aa11.98□□□□□ -0.49
CDC42BPA-205ENST00000366769 PARP1P09874 1014 aaKnown RBP11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 CYB5D1Q6P9G0 228 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 CDAN1Q8IWY9 1227 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 RETREG2Q8NC44 543 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 ARHGEF35A5YM69 484 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 FTCDO95954 541 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 UQCRFS1P1P0C7P4 283 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 GNA11P29992 359 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 FBXW4P57775 412 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 TRIP13Q15645 432 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 MTA3Q9BTC8 594 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 RASGRF2O14827 1237 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 CYP4F22Q6NT55 531 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 CCNT1O60563 726 aaKnown RBP11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 TRIM37O94972 964 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 RYBPQ8N488 228 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 PHKBQ93100 1093 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 DCTPP1Q9H773 170 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 SV2BQ7L1I2 683 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 SMYD4Q8IYR2 804 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 TRIML2Q8N7C3 387 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 NUDT16Q96DE0 195 aaKnown RBP11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 TMOD4Q9NZQ9 345 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 ARHGAP10A1A4S6 786 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 TRIM25Q14258 630 aaKnown RBP11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 EMBQ6PCB8 327 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 GRAMD1CQ8IYS0 662 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 OR8K1Q8NGG5 319 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 C17orf50Q8WW18 174 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 KCNG1Q9UIX4 513 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 SYNJ2BP-COX16A0A087WUM0 186 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 TCP11X1B4DZS4 312 aa11.97□□□□□ -0.49
CDC42BPA-205ENST00000366769 ALDH1L1O75891 902 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms