RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 SLC39A2Q9NP94 309 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 PCDHB6Q9Y5E3 794 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 FAM178BQ8IXR5 827 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 ADGRG1Q9Y653 693 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 ARMCX5Q6P1M9 558 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 NYAP1Q6ZVC0 841 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 TEKT1Q969V4 418 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 CCDC17Q96LX7 622 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 KRT15P19012 456 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 ANXA13P27216 316 aa12.9□□□□□ -0.35
CDC42BPA-202ENST00000366764 GJC1P36383 396 aa12.9□□□□□ -0.35
CDC42BPA-202ENST00000366764 ANKRD20A3Q5VUR7 823 aa12.9□□□□□ -0.35
CDC42BPA-202ENST00000366764 HOOK2Q96ED9 719 aa12.9□□□□□ -0.35
CDC42BPA-202ENST00000366764 POLR2FP61218 127 aaKnown RBP12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 ALCAMQ13740 583 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 SH2D4BQ5SQS7 431 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 PUS3Q9BZE2 481 aaKnown RBP12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 STRN3Q13033 797 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 NDST4Q9H3R1 872 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 NR2F2P24468 414 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 GPKOWQ92917 476 aaPredicted RBP eCLIP12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 TXLNGQ9NUQ3 528 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 F8W031 263 aaPredicted RBP12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 FAM47AQ5JRC9 791 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 DCUN1D2Q6PH85 259 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 TBC1D7Q9P0N9 293 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 BIN2Q9UBW5 565 aaPredicted RBP12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 PCDHA13Q9Y5I0 950 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 MROH1Q8NDA8 1641 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 MAPKAPK5Q8IW41 473 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 VPS52Q8N1B4 723 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 PSD3Q9NYI0 1048 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 LARSQ9P2J5 1176 aaKnown RBP12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 CCZ1BP86790 482 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 CCZ1P86791 482 aaPredicted RBP12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 BAIAP2L1Q9UHR4 511 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 DAAM1Q9Y4D1 1078 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 A0A1B0GTH6 734 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 PPP1R21Q6ZMI0 780 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 AFAP1L2Q8N4X5 818 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 LY9Q9HBG7 655 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 LEMD3Q9Y2U8 911 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 AFDNP55196 1824 aaKnown RBP12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 PDE6BP35913 854 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 MCAMP43121 646 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 FMO2Q99518 471 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 PLEKHG2Q9H7P9 1386 aa12.89□□□□□ -0.35
CDC42BPA-202ENST00000366764 EIF4A3P38919 411 aaKnown RBP12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 NNTQ13423 1086 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 CHURC1Q8WUH1 139 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 KRT12Q99456 494 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 VEZTQ9HBM0 779 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 EPB41L5Q9HCM4 733 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 UBN2Q6ZU65 1347 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 IFT88Q13099 833 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 KCNB1Q14721 858 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 ARID5BQ14865 1188 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 ICE2Q659A1 982 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 UTYO14607 1347 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 PLCG1P19174 1290 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 NELFCDQ8IXH7 590 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 ENC1O14682 589 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 AFPP02771 609 aaKnown RBP12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 MB21D1Q8N884 522 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 L2HGDHQ9H9P8 463 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 ZNF609O15014 1411 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 BACH1O14867 736 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 IL9RQ01113 521 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 RASGRF1Q13972 1273 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 MAP7D1Q3KQU3 841 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 ZNF622Q969S3 477 aaKnown RBP eCLIP12.88□□□□□ -0.353e-7■■□□□ 13.1
CDC42BPA-202ENST00000366764 HNRNPH2P55795 449 aaKnown RBP12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 DRP2Q13474 957 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 INTS9Q9NV88 658 aaKnown RBP12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 ZNF804BA4D1E1 1349 aa12.88□□□□□ -0.35
CDC42BPA-202ENST00000366764 ZNF512BQ96KM6 892 aaPredicted RBP12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 C1orf112Q9NSG2 853 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 SMYD4Q8IYR2 804 aaPredicted RBP12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 CMTR1Q8N1G2 835 aaKnown RBP12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 HNRNPLLQ8WVV9 542 aaKnown RBP12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 PLA2G12BQ9BX93 195 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 RABGAP1Q9Y3P9 1069 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 RIPOR2Q9Y4F9 1068 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 PDE6CP51160 858 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 ITIH3Q06033 890 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 XDHP47989 1333 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 NEK9Q8TD19 979 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 TMOD4Q9NZQ9 345 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 TUBE1Q9UJT0 475 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 PNPLA7Q6ZV29 1317 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 SYNGAP1Q96PV0 1343 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 BUB1O43683 1085 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 SARNPP82979 210 aaKnown RBP12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 ADCY2Q08462 1091 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 NR1H3Q13133 447 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 UNC13DQ70J99 1090 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 ARHGEF2Q92974 986 aaKnown RBP12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 SLC26A4O43511 780 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 GYG1P46976 350 aa12.87□□□□□ -0.35
CDC42BPA-202ENST00000366764 TRPC3Q13507 836 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms