RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 NEK1Q96PY6 1258 aa9.56□□□□□ -0.88
MRPL55-211ENST00000366738 ZKSCAN3Q9BRR0 538 aa9.56□□□□□ -0.88
MRPL55-211ENST00000366738 TRPV6Q9H1D0 765 aa9.56□□□□□ -0.88
MRPL55-211ENST00000366738 RNF41Q9H4P4 317 aaPredicted RBP9.56□□□□□ -0.88
MRPL55-211ENST00000366738 CD320Q9NPF0 282 aa9.56□□□□□ -0.88
MRPL55-211ENST00000366738 GPHNQ9NQX3 736 aaPredicted RBP9.56□□□□□ -0.88
MRPL55-211ENST00000366738 FEM1BQ9UK73 627 aa9.56□□□□□ -0.88
MRPL55-211ENST00000366738 GRIN2DO15399 1336 aa9.56□□□□□ -0.88
MRPL55-211ENST00000366738 SCN5AQ14524 2016 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 LCTP09848 1927 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 SOWAHBA6NEL2 793 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 TSPY2A6NKD2 308 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 TMEM232C9JQI7 657 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 B4GALT4O60513 344 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 TSPY3P0CV98 308 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 TSPY8P0CW00 308 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 PCP11498 1178 aaKnown RBP9.55□□□□□ -0.88
MRPL55-211ENST00000366738 NOVP48745 357 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 PSMC6P62333 389 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 KRT32Q14532 448 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 TMEM63BQ5T3F8 832 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 BLOC1S2Q6QNY1 142 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 ARMCX2Q7L311 632 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 SPRED2Q7Z698 418 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 ZNF467Q7Z7K2 595 aaPredicted RBP9.55□□□□□ -0.88
MRPL55-211ENST00000366738 RALYLQ86SE5 291 aaKnown RBP9.55□□□□□ -0.88
MRPL55-211ENST00000366738 FAM133AQ8N9E0 248 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 SLC43A3Q8NBI5 491 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 ARNTL2Q8WYA1 636 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 ESR2Q92731 530 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 HLA-CQ95604 372 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 PURBQ96QR8 312 aaKnown RBP9.55□□□□□ -0.88
MRPL55-211ENST00000366738 KRT23Q9C075 422 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 CNNM2Q9H8M5 875 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 SENP2Q9HC62 589 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 ZSWIM6Q9HCJ5 1215 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 HOMER2Q9NSB8 354 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 ZSWIM5Q9P217 1185 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 SYNPO2Q9UMS6 1093 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 COG5Q9UP83 839 aa9.55□□□□□ -0.88
MRPL55-211ENST00000366738 CACNA1AO00555 2505 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 PRC1O43663 620 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 CD2BP2O95400 341 aaKnown RBP9.54□□□□□ -0.88
MRPL55-211ENST00000366738 POU3F3P20264 500 aaPredicted RBP9.54□□□□□ -0.88
MRPL55-211ENST00000366738 RPS6KB1P23443 525 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 MRE11P49959 708 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 OAZ1P54368 228 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 EXOSC10Q01780 885 aaKnown RBP9.54□□□□□ -0.88
MRPL55-211ENST00000366738 TRDNQ13061 729 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 ITGA7Q13683 1181 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 MUM1L1Q5H9M0 696 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 TMEM67Q5HYA8 995 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 KCTD1Q719H9 257 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 NOL8Q76FK4 1167 aaKnown RBP9.54□□□□□ -0.88
MRPL55-211ENST00000366738 RUFY3Q7L099 469 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 DEFB128Q7Z7B8 93 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 CCDC144CPQ8IYA2 1237 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 ANKRD35Q8N283 1001 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 GMCL1Q96IK5 515 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 TTC14Q96N46 770 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 TM6SF1Q9BZW5 370 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 ABHD16BQ9H3Z7 469 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 A1CFQ9NQ94 594 aaKnown RBP9.54□□□□□ -0.88
MRPL55-211ENST00000366738 TSHZ2Q9NRE2 1034 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 TNKSO95271 1327 aa9.54□□□□□ -0.88
MRPL55-211ENST00000366738 PI4K2BG5E9Z4 385 aa9.53□□□□□ -0.88
MRPL55-211ENST00000366738 SH2B2O14492 632 aaPredicted RBP9.53□□□□□ -0.88
MRPL55-211ENST00000366738 PSMA5P28066 241 aa9.53□□□□□ -0.88
MRPL55-211ENST00000366738 STAT2P52630 851 aa9.53□□□□□ -0.88
MRPL55-211ENST00000366738 GRB10Q13322 594 aa9.53□□□□□ -0.88
MRPL55-211ENST00000366738 TOB2Q14106 344 aaPredicted RBP9.53□□□□□ -0.88
MRPL55-211ENST00000366738 SEC23AQ15436 765 aa9.53□□□□□ -0.88
MRPL55-211ENST00000366738 TTBK2Q6IQ55 1244 aa9.53□□□□□ -0.88
MRPL55-211ENST00000366738 RCSD1Q6JBY9 416 aa9.53□□□□□ -0.88
MRPL55-211ENST00000366738 Q6ZUG5 572 aa9.53□□□□□ -0.88
MRPL55-211ENST00000366738 DHX32Q7L7V1 743 aaKnown RBP9.53□□□□□ -0.88
MRPL55-211ENST00000366738 TLK2Q86UE8 772 aa9.53□□□□□ -0.88
MRPL55-211ENST00000366738 RPUSD2Q8IZ73 545 aaKnown RBP9.53□□□□□ -0.88
MRPL55-211ENST00000366738 ENAHQ8N8S7 591 aaPredicted RBP9.53□□□□□ -0.88
MRPL55-211ENST00000366738 CHST13Q8NET6 341 aa9.53□□□□□ -0.88
MRPL55-211ENST00000366738 SNX27Q96L92 541 aa9.53□□□□□ -0.88
MRPL55-211ENST00000366738 LARP6Q9BRS8 491 aaKnown RBP9.53□□□□□ -0.88
MRPL55-211ENST00000366738 ZNF287Q9HBT7 754 aa9.53□□□□□ -0.88
MRPL55-211ENST00000366738 RNF146Q9NTX7 359 aa9.53□□□□□ -0.88
MRPL55-211ENST00000366738 FBXO40Q9UH90 709 aa9.53□□□□□ -0.88
MRPL55-211ENST00000366738 PRR12Q9ULL5 1215 aa9.53□□□□□ -0.88
MRPL55-211ENST00000366738 STX8Q9UNK0 236 aa9.53□□□□□ -0.88
MRPL55-211ENST00000366738 ZDBF2Q9HCK1 2354 aa9.53□□□□□ -0.88
MRPL55-211ENST00000366738 TRIOO75962 3097 aa9.52□□□□□ -0.88
MRPL55-211ENST00000366738 ZNF318Q5VUA4 2279 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 LPXNO60711 386 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 CYP2C9P11712 490 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 MCM5P33992 734 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 SLC16A2P36021 539 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 SLC1A4P43007 532 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 NEK4P51957 841 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 AK2P54819 239 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 NKX3-2P78367 333 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 TNFAIP2Q03169 654 aa9.52□□□□□ -0.89
MRPL55-211ENST00000366738 TAP1Q03518 808 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms