RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 WHAMMP3Q1A5X7 153 aa19.5■□□□□ 0.71
TRIM11-202ENST00000366699 LRRC15Q8TF66 581 aa19.5■□□□□ 0.71
TRIM11-202ENST00000366699 AKT1S1Q96B36 256 aa19.5■□□□□ 0.71
TRIM11-202ENST00000366699 TUBGCP2Q9BSJ2 902 aa19.5■□□□□ 0.71
TRIM11-202ENST00000366699 ZSWIM4Q9H7M6 989 aa19.5■□□□□ 0.71
TRIM11-202ENST00000366699 PUF60Q9UHX1 559 aaKnown RBP19.5■□□□□ 0.71
TRIM11-202ENST00000366699 ATP2B2Q01814 1243 aa19.5■□□□□ 0.71
TRIM11-202ENST00000366699 KRT79Q5XKE5 535 aa19.5■□□□□ 0.71
TRIM11-202ENST00000366699 RETREG2Q8NC44 543 aa19.5■□□□□ 0.71
TRIM11-202ENST00000366699 DUSP9Q99956 384 aaKnown RBP19.5■□□□□ 0.71
TRIM11-202ENST00000366699 MMTAG2Q9BU76 263 aaKnown RBP19.5■□□□□ 0.71
TRIM11-202ENST00000366699 MXD3Q9BW11 206 aa19.5■□□□□ 0.71
TRIM11-202ENST00000366699 PVALEFA0A1B0GWK0 134 aa19.49■□□□□ 0.71
TRIM11-202ENST00000366699 MMP10P09238 476 aa19.49■□□□□ 0.71
TRIM11-202ENST00000366699 GCFC2P16383 781 aaKnown RBP19.49■□□□□ 0.71
TRIM11-202ENST00000366699 TNNI2P48788 182 aa19.49■□□□□ 0.71
TRIM11-202ENST00000366699 HAUS4Q9H6D7 363 aa19.49■□□□□ 0.71
TRIM11-202ENST00000366699 ABL1P00519 1130 aa19.49■□□□□ 0.71
TRIM11-202ENST00000366699 HDLBPQ00341 1268 aaKnown RBP19.49■□□□□ 0.71
TRIM11-202ENST00000366699 TRIM34Q9BYJ4 488 aa19.49■□□□□ 0.71
TRIM11-202ENST00000366699 STRIP1Q5VSL9 837 aa19.48■□□□□ 0.71
TRIM11-202ENST00000366699 HNRNPLLQ8WVV9 542 aaKnown RBP19.48■□□□□ 0.71
TRIM11-202ENST00000366699 LARP4BQ92615 738 aaKnown RBP19.48■□□□□ 0.71
TRIM11-202ENST00000366699 ZNF622Q969S3 477 aaKnown RBP eCLIP19.48■□□□□ 0.71
TRIM11-202ENST00000366699 UBXN6Q9BZV1 441 aa19.48■□□□□ 0.71
TRIM11-202ENST00000366699 SASH3O75995 380 aa19.48■□□□□ 0.71
TRIM11-202ENST00000366699 TDP2O95551 362 aa19.48■□□□□ 0.71
TRIM11-202ENST00000366699 CLK2P49760 499 aaKnown RBP19.48■□□□□ 0.71
TRIM11-202ENST00000366699 CLEC10AQ8IUN9 316 aa19.48■□□□□ 0.71
TRIM11-202ENST00000366699 MSANTD4Q8NCY6 345 aa19.48■□□□□ 0.71
TRIM11-202ENST00000366699 PSTPIP2Q9H939 334 aa19.48■□□□□ 0.71
TRIM11-202ENST00000366699 B4DLN1 442 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 SLC37A4O43826 429 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 MARCH6O60337 910 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 FGFR1OPO95684 399 aaKnown RBP19.47■□□□□ 0.71
TRIM11-202ENST00000366699 KRT83P78385 493 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 STK4Q13043 487 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 GRB10Q13322 594 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 ANKRD40Q6AI12 368 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 UNC13DQ70J99 1090 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 MTMR8Q96EF0 704 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 PI4KBQ9UBF8 816 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 DDX25Q9UHL0 483 aaKnown RBP19.47■□□□□ 0.71
TRIM11-202ENST00000366699 REXO2Q9Y3B8 237 aaKnown RBP19.47■□□□□ 0.71
TRIM11-202ENST00000366699 CTAGE15A4D2H0 777 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 CTAGE8P0CG41 777 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 TRIM21P19474 475 aaKnown RBP19.47■□□□□ 0.71
TRIM11-202ENST00000366699 TBC1D8BQ0IIM8 1120 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 MEA1Q16626 185 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 LONRF2Q1L5Z9 754 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 CTAGE6Q86UF2 777 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 CTAGE4Q8IX94 777 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 DCAF4Q8WV16 495 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 IQCDQ96DY2 449 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 FUT8Q9BYC5 575 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 ANKZF1Q9H8Y5 726 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 KANSL2Q9H9L4 492 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 ZNHIT6Q9NWK9 470 aaKnown RBP19.47■□□□□ 0.71
TRIM11-202ENST00000366699 RAB21Q9UL25 225 aa19.47■□□□□ 0.71
TRIM11-202ENST00000366699 NRXN2Q9P2S2 1712 aa19.46■□□□□ 0.71
TRIM11-202ENST00000366699 NFIAQ12857 509 aa19.46■□□□□ 0.71
TRIM11-202ENST00000366699 WDR59Q6PJI9 974 aa19.46■□□□□ 0.71
TRIM11-202ENST00000366699 ZNF662Q6ZS27 426 aa19.46■□□□□ 0.71
TRIM11-202ENST00000366699 SNX29Q8TEQ0 813 aa19.46■□□□□ 0.71
TRIM11-202ENST00000366699 MKL1Q969V6 931 aa19.46■□□□□ 0.71
TRIM11-202ENST00000366699 CNOT6LQ96LI5 555 aaKnown RBP19.46■□□□□ 0.71
TRIM11-202ENST00000366699 MYO6Q9UM54 1294 aa19.46■□□□□ 0.71
TRIM11-202ENST00000366699 GUCA1BQ9UMX6 200 aa19.46■□□□□ 0.71
TRIM11-202ENST00000366699 TUBBP07437 444 aa19.46■□□□□ 0.71
TRIM11-202ENST00000366699 TTBK2Q6IQ55 1244 aa19.46■□□□□ 0.71
TRIM11-202ENST00000366699 KCTD1Q719H9 257 aa19.46■□□□□ 0.71
TRIM11-202ENST00000366699 IDI2Q9BXS1 227 aa19.46■□□□□ 0.71
TRIM11-202ENST00000366699 TTYH3Q9C0H2 523 aa19.46■□□□□ 0.71
TRIM11-202ENST00000366699 DBNDD1Q9H9R9 158 aa19.46■□□□□ 0.71
TRIM11-202ENST00000366699 NYAP2Q9P242 653 aa19.46■□□□□ 0.71
TRIM11-202ENST00000366699 ANKRD31Q8N7Z5 1873 aa19.46■□□□□ 0.7
TRIM11-202ENST00000366699 USP17L10C9JJH3 530 aa19.45■□□□□ 0.7
TRIM11-202ENST00000366699 ERLIN1O75477 346 aa19.45■□□□□ 0.7
TRIM11-202ENST00000366699 NPM3O75607 178 aaKnown RBP19.45■□□□□ 0.7
TRIM11-202ENST00000366699 APBA3O96018 575 aa19.45■□□□□ 0.7
TRIM11-202ENST00000366699 CYLC1P35663 651 aaPredicted RBP19.45■□□□□ 0.7
TRIM11-202ENST00000366699 MTIF2P46199 727 aaKnown RBP19.45■□□□□ 0.7
TRIM11-202ENST00000366699 RBM5P52756 815 aaKnown RBP eCLIP19.45■□□□□ 0.7
TRIM11-202ENST00000366699 AMPD2Q01433 879 aa19.45■□□□□ 0.7
TRIM11-202ENST00000366699 PSMD2Q13200 908 aa19.45■□□□□ 0.7
TRIM11-202ENST00000366699 CERKLQ49MI3 558 aaPredicted RBP19.45■□□□□ 0.7
TRIM11-202ENST00000366699 FKBP15Q5T1M5 1219 aa19.45■□□□□ 0.7
TRIM11-202ENST00000366699 RAD54LQ92698 747 aa19.45■□□□□ 0.7
TRIM11-202ENST00000366699 BLOC1S4Q9NUP1 217 aa19.45■□□□□ 0.7
TRIM11-202ENST00000366699 GOLGB1Q14789 3259 aaKnown RBP19.45■□□□□ 0.7
TRIM11-202ENST00000366699 PSMD14O00487 310 aa19.45■□□□□ 0.7
TRIM11-202ENST00000366699 PPP1R11O60927 126 aaPredicted RBP19.45■□□□□ 0.7
TRIM11-202ENST00000366699 SLC16A2P36021 539 aa19.45■□□□□ 0.7
TRIM11-202ENST00000366699 SLC1A4P43007 532 aa19.45■□□□□ 0.7
TRIM11-202ENST00000366699 ZBED6P86452 979 aa19.45■□□□□ 0.7
TRIM11-202ENST00000366699 SMC1AQ14683 1233 aaKnown RBP19.45■□□□□ 0.7
TRIM11-202ENST00000366699 SEPT2Q15019 361 aa19.45■□□□□ 0.7
TRIM11-202ENST00000366699 MCTP2Q6DN12 878 aa19.45■□□□□ 0.7
TRIM11-202ENST00000366699 STYK1Q6J9G0 422 aa19.45■□□□□ 0.7
TRIM11-202ENST00000366699 EHBP1Q8NDI1 1231 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms