RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 PCDH11YQ9BZA8 1340 aa18.15■□□□□ 0.5
NID1-202ENST00000366595 MYL7Q01449 175 aa18.15■□□□□ 0.5
NID1-202ENST00000366595 THOC5Q13769 683 aaKnown RBP18.15■□□□□ 0.5
NID1-202ENST00000366595 SLC5A4Q9NY91 659 aa18.15■□□□□ 0.5
NID1-202ENST00000366595 ZMYM6O95789 1325 aa18.15■□□□□ 0.5
NID1-202ENST00000366595 PLTPP55058 493 aa18.15■□□□□ 0.5
NID1-202ENST00000366595 MMS19Q96T76 1030 aa18.15■□□□□ 0.5
NID1-202ENST00000366595 MRPL47Q9HD33 250 aaKnown RBP18.15■□□□□ 0.5
NID1-202ENST00000366595 TYW5A2RUC4 315 aaKnown RBP18.14■□□□□ 0.5
NID1-202ENST00000366595 MDM2Q00987 491 aaPredicted RBP18.14■□□□□ 0.5
NID1-202ENST00000366595 DMP1Q13316 513 aaPredicted RBP18.14■□□□□ 0.5
NID1-202ENST00000366595 MESDQ14696 234 aa18.14■□□□□ 0.5
NID1-202ENST00000366595 TRMT10CQ7L0Y3 403 aaKnown RBP18.14■□□□□ 0.5
NID1-202ENST00000366595 OR9Q1Q8NGQ5 310 aa18.14■□□□□ 0.5
NID1-202ENST00000366595 TMEM60Q9H2L4 133 aa18.14■□□□□ 0.5
NID1-202ENST00000366595 CHGBP05060 677 aa18.14■□□□□ 0.49
NID1-202ENST00000366595 SERPINB2P05120 415 aa18.14■□□□□ 0.49
NID1-202ENST00000366595 SYT2Q8N9I0 419 aaPredicted RBP18.14■□□□□ 0.49
NID1-202ENST00000366595 MYL10Q9BUA6 226 aa18.14■□□□□ 0.49
NID1-202ENST00000366595 ZBTB18Q99592 522 aa18.14■□□□□ 0.49
NID1-202ENST00000366595 TUBGCP2Q9BSJ2 902 aa18.14■□□□□ 0.49
NID1-202ENST00000366595 ZNF233A6NK53 670 aa18.14■□□□□ 0.49
NID1-202ENST00000366595 RNMTO43148 476 aaKnown RBP18.14■□□□□ 0.49
NID1-202ENST00000366595 MAPK4P31152 587 aa18.14■□□□□ 0.49
NID1-202ENST00000366595 TFAP4Q01664 338 aa18.14■□□□□ 0.49
NID1-202ENST00000366595 CTDSPL2Q05D32 466 aa18.14■□□□□ 0.49
NID1-202ENST00000366595 FLOT2Q14254 428 aa18.14■□□□□ 0.49
NID1-202ENST00000366595 FSCBQ5H9T9 825 aa18.14■□□□□ 0.49
NID1-202ENST00000366595 DCLK2Q8N568 766 aa18.14■□□□□ 0.49
NID1-202ENST00000366595 CNOT6LQ96LI5 555 aaKnown RBP18.14■□□□□ 0.49
NID1-202ENST00000366595 USP28Q96RU2 1077 aa18.14■□□□□ 0.49
NID1-202ENST00000366595 PTPN22Q9Y2R2 807 aa18.14■□□□□ 0.49
NID1-202ENST00000366595 MRPL11Q9Y3B7 192 aaKnown RBP18.14■□□□□ 0.49
NID1-202ENST00000366595 TMEM247A6NEH6 219 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 MYL1P05976 194 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 USH1GQ495M9 461 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 C4orf50Q6ZRC1 276 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 USP6NLQ92738 828 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 TEKT3Q9BXF9 490 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 WDR7Q9Y4E6 1490 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 GTPBP10A4D1E9 387 aaKnown RBP18.13■□□□□ 0.49
NID1-202ENST00000366595 TOM1L1O75674 476 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 ATP5JP18859 108 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 KLC3Q6P597 504 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 PCGF5Q86SE9 256 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 CNBD1Q8NA66 436 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 SPATA5Q8NB90 893 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 NBPF3Q9H094 633 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 POTEB3A0JP26 581 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 NPR1P16066 1061 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 GAP43P17677 238 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 CASP14P31944 242 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 NAA35Q5VZE5 725 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 ICE2Q659A1 982 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 POTEBQ6S5H4 581 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 MYLK4Q86YV6 388 aaPredicted RBP18.13■□□□□ 0.49
NID1-202ENST00000366595 DHX38Q92620 1227 aaKnown RBP18.13■□□□□ 0.49
NID1-202ENST00000366595 SNAPC4Q5SXM2 1469 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 EXOC1LA0A1B0GW35 172 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 NR1H3Q13133 447 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 SPOPLQ6IQ16 392 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 SUPT20HQ8NEM7 779 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 SUN2Q9UH99 717 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 A0A1B0GW55 424 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 DUX4L2P0CJ85 424 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 DUX4L3P0CJ86 424 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 DUX4L4P0CJ87 422 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 DUX4L5P0CJ88 424 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 DUX4L6P0CJ89 424 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 DUX4L7P0CJ90 424 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 TRAPPC10P48553 1259 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 ME3Q16798 604 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 XKR9Q5GH70 373 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 DUX4Q9UBX2 424 aa18.13■□□□□ 0.49
NID1-202ENST00000366595 COPG1Q9Y678 874 aaKnown RBP18.13■□□□□ 0.49
NID1-202ENST00000366595 PIK3CAP42336 1068 aa18.12■□□□□ 0.49
NID1-202ENST00000366595 PODNQ7Z5L7 613 aa18.12■□□□□ 0.49
NID1-202ENST00000366595 SESTD1Q86VW0 696 aa18.12■□□□□ 0.49
NID1-202ENST00000366595 AATFQ9NY61 560 aaKnown RBP eCLIP18.12■□□□□ 0.49
NID1-202ENST00000366595 DDAH1O94760 285 aa18.12■□□□□ 0.49
NID1-202ENST00000366595 PCP11498 1178 aaKnown RBP18.12■□□□□ 0.49
NID1-202ENST00000366595 XPAP23025 273 aaPredicted RBP18.12■□□□□ 0.49
NID1-202ENST00000366595 PPARAQ07869 468 aa18.12■□□□□ 0.49
NID1-202ENST00000366595 CRLF3Q8IUI8 442 aa18.12■□□□□ 0.49
NID1-202ENST00000366595 SPDYE1Q8NFV5 336 aaPredicted RBP18.12■□□□□ 0.49
NID1-202ENST00000366595 SUFUQ9UMX1 484 aa18.12■□□□□ 0.49
NID1-202ENST00000366595 TNNQ9UQP3 1299 aa18.12■□□□□ 0.49
NID1-202ENST00000366595 ADGRL1O94910 1474 aa18.12■□□□□ 0.49
NID1-202ENST00000366595 ARHGEF11O15085 1522 aa18.12■□□□□ 0.49
NID1-202ENST00000366595 SYCE1LA8MT33 242 aa18.12■□□□□ 0.49
NID1-202ENST00000366595 FOSP01100 380 aaPredicted RBP18.12■□□□□ 0.49
NID1-202ENST00000366595 TADA2BQ86TJ2 420 aa18.12■□□□□ 0.49
NID1-202ENST00000366595 WDR75Q8IWA0 830 aaKnown RBP18.12■□□□□ 0.49
NID1-202ENST00000366595 ZNF532Q9HCE3 1301 aa18.12■□□□□ 0.49
NID1-202ENST00000366595 KIF14Q15058 1648 aa18.12■□□□□ 0.49
NID1-202ENST00000366595 CYP4F22Q6NT55 531 aa18.12■□□□□ 0.49
NID1-202ENST00000366595 ZNF653Q96CK0 615 aa18.12■□□□□ 0.49
NID1-202ENST00000366595 LRRC37BQ96QE4 947 aa18.12■□□□□ 0.49
NID1-202ENST00000366595 PSTPIP2Q9H939 334 aa18.12■□□□□ 0.49
NID1-202ENST00000366595 WARS2Q9UGM6 360 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms