RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 SRCIN1Q9C0H9 1055 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 BCAS3Q9H6U6 928 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 CHST7Q9NS84 486 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 AP5S1Q9NUS5 200 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 CCDC87Q9NVE4 849 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 ZNF112Q9UJU3 913 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 ADAM29Q9UKF5 820 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 ZDHHC9Q9Y397 364 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 SLC4A7Q9Y6M7 1214 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 RBAK-RBAKDNI3L0D1 243 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 GFRA2O00451 464 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 PPFIA4O75335 1185 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 TBC1D8O95759 1140 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 VAV1P15498 845 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 PLCG1P19174 1290 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 PROZP22891 400 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 HIBADHP31937 336 aaKnown RBP0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 L1CAMP32004 1257 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 CCKBRP32239 447 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 GBP1P32455 592 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 IL13P35225 146 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 RAC3P60763 192 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 PTPN11Q06124 597 aaPredicted RBP0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 RAD51AP2Q09MP3 1159 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 FLIIQ13045 1269 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 CDCA8Q53HL2 280 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 CFAP70Q5T0N1 1121 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 TMEM164Q5U3C3 297 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 RASIP1Q5U651 963 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 KRTAP5-7Q6L8G8 165 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 MAMDC4Q6UXC1 1216 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 CD300LDQ6UXZ3 194 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 TMC3Q7Z5M5 1100 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 DCP2Q8IU60 420 aaKnown RBP0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 NLGN2Q8NFZ4 835 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 GPR150Q8NGU9 434 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 EPS8L3Q8TE67 593 aaKnown RBP0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 ANKRD24Q8TF21 1146 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 NEIL1Q96FI4 390 aaPredicted RBP0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 WBP1Q96G27 269 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 YIPF4Q9BSR8 244 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 AP5M1Q9H0R1 490 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 MSL2Q9HCI7 577 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 WWOXQ9NZC7 414 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 GIT1Q9Y2X7 761 aa0.94□□□□□ -2.26
RNU6-54P-201ENST00000365563 PRR23D1E9PI22 279 aaPredicted RBP0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 TRIM38O00635 465 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 PLSCR1O15162 318 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 FBXO24O75426 580 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 GSNP06396 782 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 GSTM1P09488 218 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 PRR23D2P0DMB1 279 aaPredicted RBP0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 RPS19P39019 145 aaKnown RBP0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 CDK8P49336 464 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 ZNF81P51508 661 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 ELLP55199 621 aaPredicted RBP0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 RPS26P62854 115 aaKnown RBP0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 NKX3-2P78367 333 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 FKBP4Q02790 459 aaKnown RBP eCLIP0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 CRHR2Q13324 411 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 MTMR3Q13615 1198 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 ERCC6LQ2NKX8 1250 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 TSNAXIP1Q2TAA8 658 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 TMEM201Q5SNT2 666 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 MBNL2Q5VZF2 373 aaKnown RBP0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 CWF19L1Q69YN2 538 aaKnown RBP0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 WWC2Q6AWC2 1192 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 TTBK2Q6IQ55 1244 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 TRMT10BQ6PF06 316 aaKnown RBP0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 ZNF662Q6ZS27 426 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 MIB1Q86YT6 1006 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 TMPRSS6Q8IU80 811 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 THEMISQ8N1K5 641 aaPredicted RBP0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 SYNE4Q8N205 404 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 LZTR1Q8N653 840 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 C3orf58Q8NDZ4 430 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 SMARCC1Q92922 1105 aaPredicted RBP0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 OR14A2Q96R54 314 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 CITED4Q96RK1 184 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 TMEM209Q96SK2 561 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 SPATA5L1Q9BVQ7 753 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 NRDE2Q9H7Z3 1164 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 RXFP1Q9HBX9 757 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 PRR13Q9NZ81 148 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 CEP72Q9P209 647 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 FRMD4BQ9Y2L6 1034 aa0.93□□□□□ -2.26
RNU6-54P-201ENST00000365563 UPK3BL1B0FP48 263 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 UPK3BL2E5RIL1 263 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 H0Y858 1186 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 MEIS1O00470 390 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 KIAA0355O15063 1070 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 KRT86O43790 486 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 ATG7O95352 703 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 BPNT1O95861 308 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 BMP15O95972 392 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 CELA3AP09093 270 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 CR2P20023 1033 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 KRTAP10-5P60370 271 aa0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 RPL6Q02878 288 aaKnown RBP0.92□□□□□ -2.26
RNU6-54P-201ENST00000365563 SEPT6Q14141 434 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms