RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 POLR2MP0CAP2 368 aa19.54■□□□□ 0.72
CKLF-204ENST00000362093 CST5P28325 142 aaPredicted RBP19.54■□□□□ 0.72
CKLF-204ENST00000362093 LRRC26Q2I0M4 334 aa19.54■□□□□ 0.72
CKLF-204ENST00000362093 TMEM63BQ5T3F8 832 aa19.54■□□□□ 0.72
CKLF-204ENST00000362093 IL17RAQ96F46 866 aa19.54■□□□□ 0.72
CKLF-204ENST00000362093 PXMP2Q9NR77 195 aa19.54■□□□□ 0.72
CKLF-204ENST00000362093 PDE4DIPQ5VU43 2346 aa19.54■□□□□ 0.72
CKLF-204ENST00000362093 CNTNAP5Q8WYK1 1306 aa19.53■□□□□ 0.72
CKLF-204ENST00000362093 hCG_1642624A0A1W2PR95 340 aa19.53■□□□□ 0.72
CKLF-204ENST00000362093 MYADML2A6NDP7 307 aa19.53■□□□□ 0.72
CKLF-204ENST00000362093 HOXA13P31271 388 aaPredicted RBP19.53■□□□□ 0.72
CKLF-204ENST00000362093 ADD1P35611 737 aaKnown RBP19.53■□□□□ 0.72
CKLF-204ENST00000362093 IRX5P78411 483 aaPredicted RBP19.53■□□□□ 0.72
CKLF-204ENST00000362093 TOB2Q14106 344 aaPredicted RBP19.53■□□□□ 0.72
CKLF-204ENST00000362093 DUSP28Q4G0W2 176 aa19.53■□□□□ 0.72
CKLF-204ENST00000362093 ARHGEF16Q5VV41 709 aa19.53■□□□□ 0.72
CKLF-204ENST00000362093 SPC25Q9HBM1 224 aa19.53■□□□□ 0.72
CKLF-204ENST00000362093 NAP1L2Q9ULW6 460 aaPredicted RBP19.53■□□□□ 0.72
CKLF-204ENST00000362093 NR2E3Q9Y5X4 410 aa19.53■□□□□ 0.72
CKLF-204ENST00000362093 H0YGN5 161 aa19.52■□□□□ 0.72
CKLF-204ENST00000362093 NR3C2P08235 984 aa19.52■□□□□ 0.72
CKLF-204ENST00000362093 C6orf222P0C671 652 aaPredicted RBP19.52■□□□□ 0.72
CKLF-204ENST00000362093 PTGS1P23219 599 aa19.52■□□□□ 0.72
CKLF-204ENST00000362093 METAP2P50579 478 aaKnown RBP eCLIP19.52■□□□□ 0.72
CKLF-204ENST00000362093 ANAPC15P60006 121 aa19.52■□□□□ 0.72
CKLF-204ENST00000362093 STXBP2Q15833 593 aa19.52■□□□□ 0.72
CKLF-204ENST00000362093 KCNA10Q16322 511 aa19.52■□□□□ 0.72
CKLF-204ENST00000362093 SLC39A5Q6ZMH5 540 aa19.52■□□□□ 0.72
CKLF-204ENST00000362093 NOL8Q76FK4 1167 aaKnown RBP19.52■□□□□ 0.72
CKLF-204ENST00000362093 WDR11Q9BZH6 1224 aa19.52■□□□□ 0.72
CKLF-204ENST00000362093 UPF3BQ9BZI7 483 aaKnown RBP19.52■□□□□ 0.72
CKLF-204ENST00000362093 V9GY48 417 aaPredicted RBP19.52■□□□□ 0.72
CKLF-204ENST00000362093 NID2Q14112 1375 aa19.52■□□□□ 0.72
CKLF-204ENST00000362093 LRRC37A2A6NM11 1700 aa19.51■□□□□ 0.71
CKLF-204ENST00000362093 CCDC196A0A1B0GTZ2 297 aa19.51■□□□□ 0.71
CKLF-204ENST00000362093 MOXD2PA6NHM9 499 aa19.51■□□□□ 0.71
CKLF-204ENST00000362093 PIK3CDO00329 1044 aa19.51■□□□□ 0.71
CKLF-204ENST00000362093 MEIS2O14770 477 aa19.51■□□□□ 0.71
CKLF-204ENST00000362093 DYNC1LI2O43237 492 aaPredicted RBP19.51■□□□□ 0.71
CKLF-204ENST00000362093 EIF2AK2P19525 551 aaKnown RBP19.51■□□□□ 0.71
CKLF-204ENST00000362093 PDIA3P30101 505 aaKnown RBP19.51■□□□□ 0.71
CKLF-204ENST00000362093 TLK2Q86UE8 772 aa19.51■□□□□ 0.71
CKLF-204ENST00000362093 FERMT2Q96AC1 680 aa19.51■□□□□ 0.71
CKLF-204ENST00000362093 PDCD2LQ9BRP1 358 aa19.51■□□□□ 0.71
CKLF-204ENST00000362093 ALPK3Q96L96 1907 aa19.51■□□□□ 0.71
CKLF-204ENST00000362093 EIF3JO75822 258 aaKnown RBP19.5■□□□□ 0.71
CKLF-204ENST00000362093 ACLYP53396 1101 aa19.5■□□□□ 0.71
CKLF-204ENST00000362093 ATN1P54259 1190 aaPredicted RBP19.5■□□□□ 0.71
CKLF-204ENST00000362093 SNX17Q15036 470 aa19.5■□□□□ 0.71
CKLF-204ENST00000362093 C8orf34Q49A92 452 aa19.5■□□□□ 0.71
CKLF-204ENST00000362093 GNASQ5JWF2 1037 aa19.5■□□□□ 0.71
CKLF-204ENST00000362093 C1orf53Q5VUE5 145 aa19.5■□□□□ 0.71
CKLF-204ENST00000362093 VSIG10LQ86VR7 867 aa19.5■□□□□ 0.71
CKLF-204ENST00000362093 FCHSD1Q86WN1 690 aa19.5■□□□□ 0.71
CKLF-204ENST00000362093 PCSK9Q8NBP7 692 aaKnown RBP19.5■□□□□ 0.71
CKLF-204ENST00000362093 SCFD2Q8WU76 684 aa19.5■□□□□ 0.71
CKLF-204ENST00000362093 PDRG1Q9NUG6 133 aa19.5■□□□□ 0.71
CKLF-204ENST00000362093 A0A1W2PQ45 241 aaPredicted RBP19.49■□□□□ 0.71
CKLF-204ENST00000362093 A0A1W2PQY0 241 aa19.49■□□□□ 0.71
CKLF-204ENST00000362093 NKRFO15226 690 aaKnown RBP eCLIP19.49■□□□□ 0.71
CKLF-204ENST00000362093 ARIH2O95376 493 aa19.49■□□□□ 0.71
CKLF-204ENST00000362093 PGM5Q15124 567 aa19.49■□□□□ 0.71
CKLF-204ENST00000362093 NTRK3Q16288 839 aa19.49■□□□□ 0.71
CKLF-204ENST00000362093 CCDC62Q6P9F0 684 aa19.49■□□□□ 0.71
CKLF-204ENST00000362093 USP17L6PQ6QN14 398 aa19.49■□□□□ 0.71
CKLF-204ENST00000362093 C7orf61Q8IZ16 206 aa19.49■□□□□ 0.71
CKLF-204ENST00000362093 CUL5Q93034 780 aa19.49■□□□□ 0.71
CKLF-204ENST00000362093 ZNF274Q96GC6 653 aaPredicted RBP19.49■□□□□ 0.71
CKLF-204ENST00000362093 AP5M1Q9H0R1 490 aa19.49■□□□□ 0.71
CKLF-204ENST00000362093 ALDH8A1Q9H2A2 487 aaPredicted RBP19.49■□□□□ 0.71
CKLF-204ENST00000362093 PSTPIP2Q9H939 334 aa19.49■□□□□ 0.71
CKLF-204ENST00000362093 ASGR1P07306 291 aa19.48■□□□□ 0.71
CKLF-204ENST00000362093 BEX3Q00994 111 aa19.48■□□□□ 0.71
CKLF-204ENST00000362093 TTLL4Q14679 1199 aa19.48■□□□□ 0.71
CKLF-204ENST00000362093 FSCN1Q16658 493 aaKnown RBP19.48■□□□□ 0.71
CKLF-204ENST00000362093 WWC2Q6AWC2 1192 aa19.48■□□□□ 0.71
CKLF-204ENST00000362093 SEPT14Q6ZU15 432 aa19.48■□□□□ 0.71
CKLF-204ENST00000362093 HEATR3Q7Z4Q2 680 aa19.48■□□□□ 0.71
CKLF-204ENST00000362093 SMARCC2Q8TAQ2 1214 aa19.48■□□□□ 0.71
CKLF-204ENST00000362093 GPKOWQ92917 476 aaPredicted RBP eCLIP19.48■□□□□ 0.71
CKLF-204ENST00000362093 LARP6Q9BRS8 491 aaKnown RBP19.48■□□□□ 0.71
CKLF-204ENST00000362093 FRMPD4Q14CM0 1322 aa19.48■□□□□ 0.71
CKLF-204ENST00000362093 TXNP10599 105 aaKnown RBP19.47■□□□□ 0.71
CKLF-204ENST00000362093 MYCLP12524 364 aaPredicted RBP19.47■□□□□ 0.71
CKLF-204ENST00000362093 RTP1P59025 263 aa19.47■□□□□ 0.71
CKLF-204ENST00000362093 CCT2P78371 535 aaKnown RBP19.47■□□□□ 0.71
CKLF-204ENST00000362093 TYW1BQ6NUM6 668 aa19.47■□□□□ 0.71
CKLF-204ENST00000362093 IL31RAQ8NI17 732 aa19.47■□□□□ 0.71
CKLF-204ENST00000362093 COPS5Q92905 334 aa19.47■□□□□ 0.71
CKLF-204ENST00000362093 STXBP3O00186 592 aa19.46■□□□□ 0.71
CKLF-204ENST00000362093 PRPF3O43395 683 aaKnown RBP19.46■□□□□ 0.71
CKLF-204ENST00000362093 RGS20O76081 388 aa19.46■□□□□ 0.71
CKLF-204ENST00000362093 PKN1Q16512 942 aa19.46■□□□□ 0.71
CKLF-204ENST00000362093 PFKFB3Q16875 520 aaPredicted RBP19.46■□□□□ 0.71
CKLF-204ENST00000362093 STARD7Q9NQZ5 370 aa19.46■□□□□ 0.71
CKLF-204ENST00000362093 BARHL2Q9NY43 387 aa19.46■□□□□ 0.71
CKLF-204ENST00000362093 DDX41Q9UJV9 622 aaKnown RBP19.46■□□□□ 0.71
CKLF-204ENST00000362093 ELP1O95163 1332 aa19.46■□□□□ 0.71
CKLF-204ENST00000362093 hCG_1984214I3L0E3 225 aa19.45■□□□□ 0.7
CKLF-204ENST00000362093 ZEB2O60315 1214 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms