RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 CNGB1Q14028 1251 aaPredicted RBP7.2□□□□□ -1.26
CDC42SE2-201ENST00000360515 RETREG2Q8NC44 543 aa7.2□□□□□ -1.26
CDC42SE2-201ENST00000360515 GDPD5Q8WTR4 605 aa7.2□□□□□ -1.26
CDC42SE2-201ENST00000360515 ARNTL2Q8WYA1 636 aa7.2□□□□□ -1.26
CDC42SE2-201ENST00000360515 TCP11L1Q9NUJ3 509 aa7.2□□□□□ -1.26
CDC42SE2-201ENST00000360515 CKBP12277 381 aa7.2□□□□□ -1.26
CDC42SE2-201ENST00000360515 ALDH5A1P51649 535 aaPredicted RBP7.2□□□□□ -1.26
CDC42SE2-201ENST00000360515 G3BP1Q13283 466 aaKnown RBP eCLIP7.2□□□□□ -1.26
CDC42SE2-201ENST00000360515 FAM83BQ5T0W9 1011 aa7.2□□□□□ -1.26
CDC42SE2-201ENST00000360515 CTR9Q6PD62 1173 aa7.2□□□□□ -1.26
CDC42SE2-201ENST00000360515 SERINC5Q86VE9 423 aa7.2□□□□□ -1.26
CDC42SE2-201ENST00000360515 ZDHHC14Q8IZN3 488 aa7.2□□□□□ -1.26
CDC42SE2-201ENST00000360515 LRRC47Q8N1G4 583 aaKnown RBP7.2□□□□□ -1.26
CDC42SE2-201ENST00000360515 BANK1Q8NDB2 785 aa7.2□□□□□ -1.26
CDC42SE2-201ENST00000360515 NEDD1Q8NHV4 660 aa7.2□□□□□ -1.26
CDC42SE2-201ENST00000360515 CD207Q9UJ71 328 aa7.2□□□□□ -1.26
CDC42SE2-201ENST00000360515 TTC3P53804 2025 aa7.2□□□□□ -1.26
CDC42SE2-201ENST00000360515 NCOR1O75376 2440 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 F5H6K3 240 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 KLRC3Q07444 240 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 MBTPS1Q14703 1052 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 S1PR5Q9H228 398 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 FBXO28Q9NVF7 368 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 MTMR4Q9NYA4 1195 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 CLEC1BQ9P126 229 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 ADD3Q9UEY8 706 aaKnown RBP7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 ANAPC4Q9UJX5 808 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 ZHX1Q9UKY1 873 aaPredicted RBP7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 SNHG28P0DPA3 235 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 RARSP54136 660 aaKnown RBP7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 CLEC4DQ8WXI8 215 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 EAF2Q96CJ1 260 aaPredicted RBP7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 CDCA7LQ96GN5 454 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 SCLYQ96I15 445 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 TRMT13Q9NUP7 481 aaKnown RBP7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 LZTS1Q9Y250 596 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 PRRC2BQ5JSZ5 2229 aaKnown RBP7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 AMHP03971 560 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 KCNJ6P48051 423 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 CCL23P55773 120 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 IRX5P78411 483 aaPredicted RBP7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 IKBKEQ14164 716 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 IER5LQ5T953 404 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 KRT40Q6A162 431 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 TMEM192Q8IY95 271 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 PPM1EQ8WY54 764 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 RSPH1Q8WYR4 309 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 IWS1Q96ST2 819 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 KATNAL1Q9BW62 490 aa7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.19□□□□□ -1.26
CDC42SE2-201ENST00000360515 ATP5JP18859 108 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 DEFB103AP81534 67 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 BEX3Q00994 111 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 ARHGAP1Q07960 439 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 TCEAL5Q5H9L2 206 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 FBXO11Q86XK2 927 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 CHURC1Q8WUH1 139 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 DCAF4Q8WV16 495 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 NELL1Q92832 810 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 RIPOR3Q96MK2 946 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 FSD1Q9BTV5 496 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 PHF7Q9BWX1 381 aaPredicted RBP7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 EHMT1Q9H9B1 1298 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 TBX10O75333 385 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 SDHBP21912 280 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 DDX10Q13206 875 aaKnown RBP7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 CMTR2Q8IYT2 770 aaKnown RBP7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 LCORLQ8N3X6 602 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 DDX11Q96FC9 970 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 NOB1Q9ULX3 412 aaKnown RBP7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 POLR3DP05423 398 aaPredicted RBP7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 MMP3P08254 477 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 MGAT3Q09327 533 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 CAMK1Q14012 370 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 ZYXQ15942 572 aaKnown RBP7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 SCFD2Q8WU76 684 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 HAUS7Q99871 368 aa7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 CCDC8Q9H0W5 538 aaPredicted RBP7.18□□□□□ -1.26
CDC42SE2-201ENST00000360515 WDR78Q5VTH9 848 aa7.17□□□□□ -1.26
CDC42SE2-201ENST00000360515 ASCL5Q7RTU5 278 aa7.17□□□□□ -1.26
CDC42SE2-201ENST00000360515 PPTC7Q8NI37 304 aa7.17□□□□□ -1.26
CDC42SE2-201ENST00000360515 C11orf84Q9BUA3 381 aaPredicted RBP7.17□□□□□ -1.26
CDC42SE2-201ENST00000360515 TTLL1O95922 423 aa7.17□□□□□ -1.26
CDC42SE2-201ENST00000360515 BMPR1AP36894 532 aa7.17□□□□□ -1.26
CDC42SE2-201ENST00000360515 MCM9Q9NXL9 1143 aa7.17□□□□□ -1.26
CDC42SE2-201ENST00000360515 ZNF532Q9HCE3 1301 aa7.17□□□□□ -1.26
CDC42SE2-201ENST00000360515 GNAT2P19087 354 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 PSMC6P62333 389 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 CNTN2Q02246 1040 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 EVX2Q03828 476 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 ZNF528Q3MIS6 628 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 BRDTQ58F21 947 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 GDF6Q6KF10 455 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 TEX2Q8IWB9 1127 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 CCDC105Q8IYK2 499 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 GPR161Q8N6U8 529 aaKnown RBP7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 ZNF287Q9HBT7 754 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 B4DLN1 442 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 KCNA5P22460 613 aa7.16□□□□□ -1.26
CDC42SE2-201ENST00000360515 ID4P47928 161 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms