RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 RPAP1Q9BWH6 1393 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-203ENST00000358544 KDM1AO60341 852 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 KDRP35968 1356 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 GRID2IPA4D2P6 1211 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 MBD4O95243 580 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 LSP1P33241 339 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 MFN1Q8IWA4 741 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 SYMPKQ92797 1274 aaKnown RBP6.6□□□□□ -1.35
VPS13B-203ENST00000358544 TEKT1Q969V4 418 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 MLXIPQ9HAP2 919 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 FBLN1P23142 703 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 TMEM154Q6P9G4 183 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 ANKRD35Q8N283 1001 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 KIF2BQ8N4N8 673 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 MMS19Q96T76 1030 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 MRPL46Q9H2W6 279 aaKnown RBP6.6□□□□□ -1.35
VPS13B-203ENST00000358544 LRWD1Q9UFC0 647 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 RWDD2AQ9UIY3 292 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 TMEM232C9JQI7 657 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 LONP2Q86WA8 852 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 DZIP3Q86Y13 1208 aaKnown RBP6.6□□□□□ -1.35
VPS13B-203ENST00000358544 KIF23Q02241 960 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-203ENST00000358544 ANKLE2Q86XL3 938 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 SSH3Q8TE77 659 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 PITPNM3Q9BZ71 974 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 CDHR2Q9BYE9 1310 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 E7EWF7 191 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 HSPA6P17066 643 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 KCNA4P22459 653 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 GRAMD1CQ8IYS0 662 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 MAGEB6Q8N7X4 407 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 DHTKD1Q96HY7 919 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-203ENST00000358544 BZW2Q9Y6E2 419 aaKnown RBP6.6□□□□□ -1.35
VPS13B-203ENST00000358544 CUL7Q14999 1698 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 MKRN3Q13064 507 aaKnown RBP6.6□□□□□ -1.35
VPS13B-203ENST00000358544 HNRNPLLQ8WVV9 542 aaKnown RBP6.6□□□□□ -1.35
VPS13B-203ENST00000358544 ITSN2Q9NZM3 1697 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 EXOC5O00471 708 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 ATP5JP18859 108 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 HIC2Q96JB3 615 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 TUBGCP2Q9BSJ2 902 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 SPC25Q9HBM1 224 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 NCOA3Q9Y6Q9 1424 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 PPP6R2O75170 966 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 DR1Q01658 176 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 CDR2Q01850 454 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 SYT2Q8N9I0 419 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-203ENST00000358544 PREPLQ4J6C6 727 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-203ENST00000358544 PARP3Q9Y6F1 533 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 PZPP20742 1482 aa6.6□□□□□ -1.35
VPS13B-203ENST00000358544 A0A0G2JND7 137 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 STK10O94804 968 aaKnown RBP6.59□□□□□ -1.35
VPS13B-203ENST00000358544 FSBPO95073 299 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 ATP1A1P05023 1023 aaKnown RBP6.59□□□□□ -1.35
VPS13B-203ENST00000358544 XPO6Q96QU8 1125 aaKnown RBP6.59□□□□□ -1.35
VPS13B-203ENST00000358544 MPHOSPH6Q99547 160 aaKnown RBP6.59□□□□□ -1.35
VPS13B-203ENST00000358544 CADP27708 2225 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 ARHGEF11O15085 1522 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 WDR44Q5JSH3 913 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 NFRKBQ6P4R8 1299 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 FOXR1Q6PIV2 292 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 ARHGEF18Q6ZSZ5 1173 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 ALPK2Q86TB3 2170 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 NBASA2RRP1 2371 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 MPDZO75970 2070 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 TAF5LO75529 589 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 ANAPC5Q9UJX4 755 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 PDIA3P30101 505 aaKnown RBP6.59□□□□□ -1.35
VPS13B-203ENST00000358544 CWF19L2Q2TBE0 894 aaKnown RBP6.59□□□□□ -1.35
VPS13B-203ENST00000358544 SWT1Q5T5J6 900 aaKnown RBP6.59□□□□□ -1.35
VPS13B-203ENST00000358544 LMBR1LQ6UX01 489 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 KBTBD3Q8NAB2 608 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 SPDYE1Q8NFV5 336 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-203ENST00000358544 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.59□□□□□ -1.35
VPS13B-203ENST00000358544 TGS1Q96RS0 853 aaKnown RBP6.59□□□□□ -1.35
VPS13B-203ENST00000358544 EIF2AQ9BY44 585 aaKnown RBP6.59□□□□□ -1.35
VPS13B-203ENST00000358544 CARD9Q9H257 536 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 RAB20Q9NX57 234 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 MYH14Q7Z406 1995 aaKnown RBP6.59□□□□□ -1.35
VPS13B-203ENST00000358544 NELFCDQ8IXH7 590 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 GNA14O95837 355 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 FGGP02679 453 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 ACADSP16219 412 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 MTHFSDQ2M296 383 aaKnown RBP6.59□□□□□ -1.35
VPS13B-203ENST00000358544 Q4G0T1 1027 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 CYP4F22Q6NT55 531 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 KDM7AQ6ZMT4 941 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 CASP10Q92851 521 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 FMO2Q99518 471 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 IMPG2Q9BZV3 1241 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 ATG3Q9NT62 314 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 UTP6Q9NYH9 597 aaKnown RBP6.59□□□□□ -1.35
VPS13B-203ENST00000358544 EPS15L1Q9UBC2 864 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 MCM8Q9UJA3 840 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-203ENST00000358544 PDE5AO76074 875 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 KRT14P02533 472 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 SPARCL1Q14515 664 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 PPP2R5BQ15173 497 aa6.59□□□□□ -1.35
VPS13B-203ENST00000358544 NUGGCQ68CJ6 796 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms