RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 LTBP2Q14767 1821 aa11.96□□□□□ -0.49
LINC01560-201ENST00000357412 PARP14Q460N5 1801 aa11.96□□□□□ -0.49
LINC01560-201ENST00000357412 SUPT20HL2P0C7V6 817 aa11.96□□□□□ -0.49
LINC01560-201ENST00000357412 TXNP10599 105 aaKnown RBP11.96□□□□□ -0.49
LINC01560-201ENST00000357412 C1QBPQ07021 282 aaKnown RBP11.96□□□□□ -0.49
LINC01560-201ENST00000357412 IMMTQ16891 758 aaKnown RBP11.96□□□□□ -0.49
LINC01560-201ENST00000357412 QRICH1Q2TAL8 776 aa11.96□□□□□ -0.49
LINC01560-201ENST00000357412 NBPF20Q3BBV1 942 aa11.96□□□□□ -0.49
LINC01560-201ENST00000357412 CCDC62Q6P9F0 684 aa11.96□□□□□ -0.49
LINC01560-201ENST00000357412 TAAR1Q96RJ0 339 aa11.96□□□□□ -0.49
LINC01560-201ENST00000357412 MPHOSPH6Q99547 160 aaKnown RBP11.96□□□□□ -0.49
LINC01560-201ENST00000357412 MAF1Q9H063 256 aa11.96□□□□□ -0.49
LINC01560-201ENST00000357412 GPHNQ9NQX3 736 aaPredicted RBP11.96□□□□□ -0.49
LINC01560-201ENST00000357412 CTNNA3Q9UI47 895 aa11.96□□□□□ -0.49
LINC01560-201ENST00000357412 YBX2Q9Y2T7 364 aaKnown RBP11.96□□□□□ -0.49
LINC01560-201ENST00000357412 ABCB11O95342 1321 aa11.95□□□□□ -0.5
LINC01560-201ENST00000357412 B4DLN1 442 aa11.95□□□□□ -0.5
LINC01560-201ENST00000357412 PDE4AP27815 886 aa11.95□□□□□ -0.5
LINC01560-201ENST00000357412 MRPL12P52815 198 aaKnown RBP11.95□□□□□ -0.5
LINC01560-201ENST00000357412 ADGRE1Q14246 886 aa11.95□□□□□ -0.5
LINC01560-201ENST00000357412 TTLL4Q14679 1199 aa11.95□□□□□ -0.5
LINC01560-201ENST00000357412 RAB30Q15771 203 aa11.95□□□□□ -0.5
LINC01560-201ENST00000357412 ASPRV1Q53RT3 343 aa11.95□□□□□ -0.5
LINC01560-201ENST00000357412 BRDTQ58F21 947 aaPredicted RBP11.95□□□□□ -0.5
LINC01560-201ENST00000357412 NFRKBQ6P4R8 1299 aa11.95□□□□□ -0.5
LINC01560-201ENST00000357412 RPUSD2Q8IZ73 545 aaKnown RBP11.95□□□□□ -0.5
LINC01560-201ENST00000357412 PPP1R13LQ8WUF5 828 aa11.95□□□□□ -0.5
LINC01560-201ENST00000357412 KRT23Q9C075 422 aa11.95□□□□□ -0.5
LINC01560-201ENST00000357412 MTIF3Q9H2K0 278 aaKnown RBP11.95□□□□□ -0.5
LINC01560-201ENST00000357412 PRDM12Q9H4Q4 367 aa11.95□□□□□ -0.5
LINC01560-201ENST00000357412 JMJD4Q9H9V9 463 aa11.95□□□□□ -0.5
LINC01560-201ENST00000357412 MSRAQ9UJ68 235 aa11.95□□□□□ -0.5
LINC01560-201ENST00000357412 EYSQ5T1H1 3165 aa11.95□□□□□ -0.5
LINC01560-201ENST00000357412 SMCHD1A6NHR9 2005 aa11.94□□□□□ -0.5
LINC01560-201ENST00000357412 RAD50Q92878 1312 aa11.94□□□□□ -0.5
LINC01560-201ENST00000357412 KPNA6O60684 536 aa11.94□□□□□ -0.5
LINC01560-201ENST00000357412 PARP1P09874 1014 aaKnown RBP11.94□□□□□ -0.5
LINC01560-201ENST00000357412 GSPT1P15170 499 aaKnown RBP11.94□□□□□ -0.5
LINC01560-201ENST00000357412 RABGGTBP53611 331 aa11.94□□□□□ -0.5
LINC01560-201ENST00000357412 FAM47CQ5HY64 1035 aa11.94□□□□□ -0.5
LINC01560-201ENST00000357412 FBXO11Q86XK2 927 aa11.94□□□□□ -0.5
LINC01560-201ENST00000357412 MCF2L2Q86YR7 1114 aa11.94□□□□□ -0.5
LINC01560-201ENST00000357412 STAG2Q8N3U4 1231 aa11.94□□□□□ -0.5
LINC01560-201ENST00000357412 NSUN6Q8TEA1 469 aaKnown RBP11.94□□□□□ -0.5
LINC01560-201ENST00000357412 NKX2-4Q9H2Z4 354 aa11.94□□□□□ -0.5
LINC01560-201ENST00000357412 VAT1LQ9HCJ6 419 aa11.94□□□□□ -0.5
LINC01560-201ENST00000357412 MRPL11Q9Y3B7 192 aaKnown RBP11.94□□□□□ -0.5
LINC01560-201ENST00000357412 OPLAHO14841 1288 aa11.93□□□□□ -0.5
LINC01560-201ENST00000357412 PFKMP08237 780 aa11.93□□□□□ -0.5
LINC01560-201ENST00000357412 GHRHRQ02643 423 aa11.93□□□□□ -0.5
LINC01560-201ENST00000357412 PTPN11Q06124 597 aaPredicted RBP11.93□□□□□ -0.5
LINC01560-201ENST00000357412 ARHGAP1Q07960 439 aa11.93□□□□□ -0.5
LINC01560-201ENST00000357412 SEC23AQ15436 765 aa11.93□□□□□ -0.5
LINC01560-201ENST00000357412 LY6KQ17RY6 165 aa11.93□□□□□ -0.5
LINC01560-201ENST00000357412 SLC35G1Q2M3R5 365 aa11.93□□□□□ -0.5
LINC01560-201ENST00000357412 IFIT1BQ5T764 474 aaKnown RBP11.93□□□□□ -0.5
LINC01560-201ENST00000357412 SEPT14Q6ZU15 432 aa11.93□□□□□ -0.5
LINC01560-201ENST00000357412 CYB5R4Q7L1T6 521 aa11.93□□□□□ -0.5
LINC01560-201ENST00000357412 AFG1LQ8WV93 481 aa11.93□□□□□ -0.5
LINC01560-201ENST00000357412 KAT2BQ92831 832 aa11.93□□□□□ -0.5
LINC01560-201ENST00000357412 MTMR8Q96EF0 704 aa11.93□□□□□ -0.5
LINC01560-201ENST00000357412 IWS1Q96ST2 819 aa11.93□□□□□ -0.5
LINC01560-201ENST00000357412 RMDN3Q96TC7 470 aa11.93□□□□□ -0.5
LINC01560-201ENST00000357412 GAS2L1Q99501 681 aaPredicted RBP11.93□□□□□ -0.5
LINC01560-201ENST00000357412 UBAC1Q9BSL1 405 aa11.93□□□□□ -0.5
LINC01560-201ENST00000357412 CNNM2Q9H8M5 875 aa11.93□□□□□ -0.5
LINC01560-201ENST00000357412 SLC28A3Q9HAS3 691 aa11.93□□□□□ -0.5
LINC01560-201ENST00000357412 PRDM6Q9NQX0 595 aa11.93□□□□□ -0.5
LINC01560-201ENST00000357412 SLC4A7Q9Y6M7 1214 aa11.93□□□□□ -0.5
LINC01560-201ENST00000357412 COL11A1P12107 1806 aaPredicted RBP11.93□□□□□ -0.5
LINC01560-201ENST00000357412 PRUNE2Q8WUY3 3088 aa11.92□□□□□ -0.5
LINC01560-201ENST00000357412 ZBBXA8MT70 800 aa11.92□□□□□ -0.5
LINC01560-201ENST00000357412 PITPNM1O00562 1244 aa11.92□□□□□ -0.5
LINC01560-201ENST00000357412 DHX16O60231 1041 aaKnown RBP11.92□□□□□ -0.5
LINC01560-201ENST00000357412 PPP1R11O60927 126 aaPredicted RBP11.92□□□□□ -0.5
LINC01560-201ENST00000357412 GH1P01241 217 aa11.92□□□□□ -0.5
LINC01560-201ENST00000357412 MMP3P08254 477 aa11.92□□□□□ -0.5
LINC01560-201ENST00000357412 IQCF3P0C7M6 154 aa11.92□□□□□ -0.5
LINC01560-201ENST00000357412 MYOGP15173 224 aa11.92□□□□□ -0.5
LINC01560-201ENST00000357412 ATP2A2P16615 1042 aaKnown RBP11.92□□□□□ -0.5
LINC01560-201ENST00000357412 EIF2AK2P19525 551 aaKnown RBP11.92□□□□□ -0.5
LINC01560-201ENST00000357412 STXBP2Q15833 593 aa11.92□□□□□ -0.5
LINC01560-201ENST00000357412 ARHGEF16Q5VV41 709 aa11.92□□□□□ -0.5
LINC01560-201ENST00000357412 DEFB128Q7Z7B8 93 aa11.92□□□□□ -0.5
LINC01560-201ENST00000357412 CTAGE1Q96RT6 745 aa11.92□□□□□ -0.5
LINC01560-201ENST00000357412 AMNQ9BXJ7 453 aa11.92□□□□□ -0.5
LINC01560-201ENST00000357412 MAD2L2Q9UI95 211 aa11.92□□□□□ -0.5
LINC01560-201ENST00000357412 DDX41Q9UJV9 622 aaKnown RBP11.92□□□□□ -0.5
LINC01560-201ENST00000357412 MYH7P12883 1935 aa11.92□□□□□ -0.5
LINC01560-201ENST00000357412 PALM3A6NDB9 673 aaPredicted RBP11.91□□□□□ -0.5
LINC01560-201ENST00000357412 KLRF2D3W0D1 207 aa11.91□□□□□ -0.5
LINC01560-201ENST00000357412 ZBTB5O15062 677 aa11.91□□□□□ -0.5
LINC01560-201ENST00000357412 EIF3JO75822 258 aaKnown RBP11.91□□□□□ -0.5
LINC01560-201ENST00000357412 NR3C2P08235 984 aa11.91□□□□□ -0.5
LINC01560-201ENST00000357412 CYP21A2P08686 494 aa11.91□□□□□ -0.5
LINC01560-201ENST00000357412 RFC2P35250 354 aa11.91□□□□□ -0.5
LINC01560-201ENST00000357412 HSD17B4P51659 736 aa11.91□□□□□ -0.5
LINC01560-201ENST00000357412 GPNMBQ14956 572 aa11.91□□□□□ -0.5
LINC01560-201ENST00000357412 TTC22Q5TAA0 569 aa11.91□□□□□ -0.5
LINC01560-201ENST00000357412 SESTD1Q86VW0 696 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms