RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 NFE2L3Q9Y4A8 694 aa14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 WDR90Q96KV7 1748 aa14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 TRAF5O00463 557 aa14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 FOXN1O15353 648 aa14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 CTNND1O60716 968 aaKnown RBP14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 PTPREP23469 700 aa14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 ERCC5P28715 1186 aaPredicted RBP14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 IKQ13123 557 aaPredicted RBP14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 POSTNQ15063 836 aa14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 SRGAP1Q7Z6B7 1085 aa14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 ZNF579Q8NAF0 562 aaKnown RBP14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 MKL1Q969V6 931 aa14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 KLRG1Q96E93 195 aa14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 CDCA5Q96FF9 252 aa14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 NAA15Q9BXJ9 866 aaKnown RBP14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 FBXO2Q9UK22 296 aaPredicted RBP14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 PPP2R3BQ9Y5P8 575 aa14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 POTEB2H3BUK9 544 aa14.24□□□□□ -0.13
RTFDC1-202ENST00000357348 PRPF3O43395 683 aaKnown RBP14.24□□□□□ -0.13
RTFDC1-202ENST00000357348 USP2O75604 605 aaPredicted RBP14.24□□□□□ -0.13
RTFDC1-202ENST00000357348 FECHP22830 423 aa14.24□□□□□ -0.13
RTFDC1-202ENST00000357348 ADKP55263 362 aaKnown RBP14.24□□□□□ -0.13
RTFDC1-202ENST00000357348 SNAP25P60880 206 aa14.24□□□□□ -0.13
RTFDC1-202ENST00000357348 ZNF543Q08ER8 600 aa14.24□□□□□ -0.13
RTFDC1-202ENST00000357348 APTXQ7Z2E3 356 aaKnown RBP14.24□□□□□ -0.13
RTFDC1-202ENST00000357348 PNMA8AQ86V59 439 aaPredicted RBP14.24□□□□□ -0.13
RTFDC1-202ENST00000357348 SHISA4Q96DD7 197 aa14.24□□□□□ -0.13
RTFDC1-202ENST00000357348 PIGSQ96S52 555 aa14.24□□□□□ -0.13
RTFDC1-202ENST00000357348 MRPL44Q9H9J2 332 aaKnown RBP14.24□□□□□ -0.13
RTFDC1-202ENST00000357348 DOCK1Q14185 1865 aa14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 H3BQF6 201 aa14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 SNHG28P0DPA3 235 aa14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 PBX1P40424 430 aa14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 PTPN21Q16825 1174 aa14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 FAM177A1Q8N128 213 aaPredicted RBP14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 GOLGA5Q8TBA6 731 aa14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 ADGRG1Q9Y653 693 aa14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 TRIM75PA6NK02 468 aa14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 CCDC175P0C221 793 aa14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 CDK11BP21127 795 aaKnown RBP14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 GNAQP50148 359 aa14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 ZSCAN26Q16670 478 aa14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 BEND6Q5SZJ8 279 aaPredicted RBP14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 NOSTRINQ8IVI9 506 aa14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 ZC3H15Q8WU90 426 aaKnown RBP14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 WASF1Q92558 559 aa14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 HOOK2Q96ED9 719 aa14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 ANKZF1Q9H8Y5 726 aa14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 CDC23Q9UJX2 597 aa14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 ADAM21Q9UKJ8 722 aa14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 TMX2Q9Y320 296 aa14.23□□□□□ -0.13
RTFDC1-202ENST00000357348 AKR1B15C9JRZ8 316 aaPredicted RBP14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 PPP1R12BO60237 982 aaPredicted RBP14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 TOB1P50616 345 aaPredicted RBP14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 SPP2Q13103 211 aa14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 MTMR2Q13614 643 aa14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 ASPRV1Q53RT3 343 aa14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 FAM83BQ5T0W9 1011 aa14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 HEATR3Q7Z4Q2 680 aa14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 SCYL3Q8IZE3 742 aa14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 ADGRF4Q8IZF3 695 aa14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 PDILTQ8N807 584 aa14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 CEP112Q8N8E3 955 aa14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 CNKSR2Q8WXI2 1034 aa14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 PICK1Q9NRD5 415 aa14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 ZHX2Q9Y6X8 837 aa14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 USP17L10C9JJH3 530 aa14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 PRR29P0C7W0 189 aa14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 SCG2P13521 617 aa14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 CHMP4BP1P59074 171 aa14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 KANK3Q6NY19 840 aa14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 CCDC12Q8WUD4 166 aaPredicted RBP14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 CCDC34Q96HJ3 373 aa14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 ZNF112Q9UJU3 913 aa14.22□□□□□ -0.13
RTFDC1-202ENST00000357348 ACTN4O43707 911 aaKnown RBP14.21□□□□□ -0.13
RTFDC1-202ENST00000357348 RPS6KA5O75582 802 aa14.21□□□□□ -0.13
RTFDC1-202ENST00000357348 BMP3P12645 472 aa14.21□□□□□ -0.13
RTFDC1-202ENST00000357348 GMCL1P1Q8NEA9 526 aa14.21□□□□□ -0.13
RTFDC1-202ENST00000357348 GOPCQ9HD26 462 aa14.21□□□□□ -0.13
RTFDC1-202ENST00000357348 SERTAD1Q9UHV2 236 aa14.21□□□□□ -0.13
RTFDC1-202ENST00000357348 OTOFQ9HC10 1997 aa14.21□□□□□ -0.13
RTFDC1-202ENST00000357348 SMCHD1A6NHR9 2005 aa14.21□□□□□ -0.13
RTFDC1-202ENST00000357348 BTBD18B2RXH4 712 aa14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 ADAMTS3O15072 1205 aa14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 MMP1P03956 469 aa14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 PTPRAP18433 802 aa14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 NR5A1Q13285 461 aa14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 VGLL4Q14135 290 aa14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 PFKFB3Q16875 520 aaPredicted RBP14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 TYW1BQ6NUM6 668 aa14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 RAD9BQ6WBX8 426 aa14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.21□□□□□ -0.143e-6■■■□□ 15.4
RTFDC1-202ENST00000357348 OXER1Q8TDS5 423 aa14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 RRP36Q96EU6 259 aaKnown RBP14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 CLMNQ96JQ2 1002 aa14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 DESI2Q9BSY9 194 aa14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 FOXP1Q9H334 677 aaPredicted RBP14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 JMJD4Q9H9V9 463 aa14.21□□□□□ -0.14
RTFDC1-202ENST00000357348 SAMSN1Q9NSI8 373 aaKnown RBP14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms