RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 CXCR5P32302 372 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 HSPA9P38646 679 aaKnown RBP13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 PAFAH1B1P43034 410 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 SEC24CP53992 1094 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 ANKRD40Q6AI12 368 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 FAM228AQ86W67 206 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 WHAMMQ8TF30 809 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 CCSER1Q9C0I3 900 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 BTG4Q9NY30 223 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 CCDC189A1A4V9 331 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 MATR3P43243 847 aaKnown RBP eCLIP13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 FAM114A1Q8IWE2 563 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 TMBIM4Q9HC24 238 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 SLC12A6Q9UHW9 1150 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 C5orf60A6NFR6 353 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 CFAP221Q4G0U5 840 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 LRIG3Q6UXM1 1119 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 CATIPQ7Z7H3 387 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 NLRP10Q86W26 655 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 SRBD1Q8N5C6 995 aaKnown RBP13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 MTMR8Q96EF0 704 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 CYFIP2Q96F07 1278 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 MROH5Q6ZUA9 1318 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 BICDL2A1A5D9 508 aa13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 GRID2IPA4D2P6 1211 aa13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 H0YGN5 161 aa13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 M0R2N6 131 aa13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 PES1O00541 588 aaKnown RBP13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 EPHB6O15197 1021 aa13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 NCK2O43639 380 aa13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 EIF4A3P38919 411 aaKnown RBP13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 CCDC181Q5TID7 509 aa13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 TYW1BQ6NUM6 668 aa13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 GIGYF2Q6Y7W6 1299 aaKnown RBP13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 CASKIN2Q8WXE0 1202 aa13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 MIEF2Q96C03 454 aa13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 PLCB1Q9NQ66 1216 aa13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 NFS1Q9Y697 457 aa13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 CACNA1SQ13698 1873 aa13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 BAZ2AQ9UIF9 1905 aaKnown RBP13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 A0A1B0GUL6 1792 aa13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 NUP98P52948 1817 aa13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 ZSCAN5CA6NGD5 496 aaPredicted RBP13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 BAP1Q92560 729 aa13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 OSBPL7Q9BZF2 842 aa13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 TMEM59LQ9UK28 342 aa13.41□□□□□ -0.26
SMARCAL1-201ENST00000357276 SMIM22K7EJ46 135 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 HEXIM1O94992 359 aaKnown RBP13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 PAEPP09466 180 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 SCG2P13521 617 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 IFT88Q13099 833 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 PFKFB3Q16875 520 aaPredicted RBP13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 LACTB2Q53H82 288 aaPredicted RBP13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 FUKQ8N0W3 1084 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 BANK1Q8NDB2 785 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 NOC4LQ9BVI4 516 aaKnown RBP13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 MAGEF1Q9HAY2 307 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 EPB41L5Q9HCM4 733 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 ABCB11O95342 1321 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 FLT1P17948 1338 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 ECHS1P30084 290 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 PPP1R2P41236 205 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 IFIT1BQ5T764 474 aaKnown RBP13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 TAX1BP1Q86VP1 789 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 C2CD5Q86YS7 1000 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 MS4A14Q96JA4 679 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 CUEDC2Q9H467 287 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 ATAD5Q96QE3 1844 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 LAMB1P07942 1786 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 DNM1LO00429 736 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 TRAPPC3O43617 180 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 BYSLQ13895 437 aaKnown RBP13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 CDC37Q16543 378 aaPredicted RBP13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 SPRED3Q2MJR0 410 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 TLDC1Q6P9B6 456 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 GIMAP7Q8NHV1 300 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 INPP4AQ96PE3 977 aaPredicted RBP13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 POLD4Q9HCU8 107 aa13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 DDX20Q9UHI6 824 aaKnown RBP13.4□□□□□ -0.26
SMARCAL1-201ENST00000357276 SSU72P8A0A1W2PR75 194 aa13.39□□□□□ -0.27
SMARCAL1-201ENST00000357276 VEGFAP15692 232 aaPredicted RBP13.39□□□□□ -0.27
SMARCAL1-201ENST00000357276 GUCY2DQ02846 1103 aa13.39□□□□□ -0.27
SMARCAL1-201ENST00000357276 CEP85LQ5SZL2 805 aa13.39□□□□□ -0.27
SMARCAL1-201ENST00000357276 HGSNATQ68CP4 663 aa13.39□□□□□ -0.27
SMARCAL1-201ENST00000357276 CYB5D1Q6P9G0 228 aa13.39□□□□□ -0.27
SMARCAL1-201ENST00000357276 ARHGAP27Q6ZUM4 889 aa13.39□□□□□ -0.27
SMARCAL1-201ENST00000357276 CCDC50Q8IVM0 306 aa13.39□□□□□ -0.27
SMARCAL1-201ENST00000357276 PSMB7Q99436 277 aa13.39□□□□□ -0.27
SMARCAL1-201ENST00000357276 FAM205AQ6ZU69 1335 aa13.39□□□□□ -0.27
SMARCAL1-201ENST00000357276 RDXP35241 583 aaKnown RBP13.39□□□□□ -0.27
SMARCAL1-201ENST00000357276 XRCC4Q13426 336 aa13.39□□□□□ -0.27
SMARCAL1-201ENST00000357276 ANKRD20A8PQ5CZ79 823 aa13.39□□□□□ -0.27
SMARCAL1-201ENST00000357276 ADGRA1Q86SQ6 560 aa13.39□□□□□ -0.27
SMARCAL1-201ENST00000357276 PARP9Q8IXQ6 854 aa13.39□□□□□ -0.27
SMARCAL1-201ENST00000357276 ZNF622Q969S3 477 aaKnown RBP eCLIP13.39□□□□□ -0.27
SMARCAL1-201ENST00000357276 NOX5Q96PH1 765 aa13.39□□□□□ -0.27
SMARCAL1-201ENST00000357276 C7orf25Q9BPX7 421 aa13.39□□□□□ -0.27
SMARCAL1-201ENST00000357276 ESYT3A0FGR9 886 aa13.38□□□□□ -0.27
SMARCAL1-201ENST00000357276 PCP11498 1178 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms