RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 BANK1Q8NDB2 785 aa17.04■□□□□ 0.32
TRAPPC11-202ENST00000357207 ADAMTS1Q9UHI8 967 aa17.04■□□□□ 0.32
TRAPPC11-202ENST00000357207 LGALS16A8MUM7 142 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 TEX33O43247 280 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 SRGAP2O75044 1071 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 SERPING1P05155 500 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 PEX19P40855 299 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 MRPS25P82663 173 aaKnown RBP17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 BBOF1Q8ND07 529 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 SMC1BQ8NDV3 1235 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 CNOT10Q9H9A5 744 aaKnown RBP17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 USP40Q9NVE5 1235 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 SSX2IPQ9Y2D8 614 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 PCDHA1Q9Y5I3 950 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 MRFAP1Q9Y605 127 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 AFPP02771 609 aaKnown RBP17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 PABPC4Q13310 644 aaKnown RBP eCLIP17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 TTC16Q8NEE8 873 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 WDR24Q96S15 920 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 PHBP35232 272 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 GTF2IP78347 998 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 RASA3Q14644 834 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 DPP8Q6V1X1 898 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 CAPN12Q6ZSI9 719 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 ASAP1Q9ULH1 1129 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 LRRC8CQ8TDW0 803 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 C8orf37Q96NL8 207 aa17.03■□□□□ 0.32
TRAPPC11-202ENST00000357207 STK36Q9NRP7 1315 aa17.02■□□□□ 0.32
TRAPPC11-202ENST00000357207 MAP3K4Q9Y6R4 1608 aa17.02■□□□□ 0.32
TRAPPC11-202ENST00000357207 CUL4BQ13620 913 aa17.02■□□□□ 0.32
TRAPPC11-202ENST00000357207 NSMFQ6X4W1 530 aa17.02■□□□□ 0.32
TRAPPC11-202ENST00000357207 MB21D2Q8IYB1 491 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC11-202ENST00000357207 CCDC127Q96BQ5 260 aa17.02■□□□□ 0.32
TRAPPC11-202ENST00000357207 LUC7L3O95232 432 aaKnown RBP17.02■□□□□ 0.32
TRAPPC11-202ENST00000357207 TPD52P55327 224 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC11-202ENST00000357207 IL9RQ01113 521 aa17.02■□□□□ 0.32
TRAPPC11-202ENST00000357207 GLE1Q53GS7 698 aaKnown RBP17.02■□□□□ 0.32
TRAPPC11-202ENST00000357207 MIER3Q7Z3K6 550 aa17.02■□□□□ 0.32
TRAPPC11-202ENST00000357207 NLRP10Q86W26 655 aa17.02■□□□□ 0.32
TRAPPC11-202ENST00000357207 RAB20Q9NX57 234 aa17.02■□□□□ 0.32
TRAPPC11-202ENST00000357207 ZNF148Q9UQR1 794 aa17.02■□□□□ 0.32
TRAPPC11-202ENST00000357207 WDR19Q8NEZ3 1342 aa17.02■□□□□ 0.31
TRAPPC11-202ENST00000357207 PABPN1LA6NDY0 278 aaKnown RBP17.02■□□□□ 0.31
TRAPPC11-202ENST00000357207 MCAMP43121 646 aa17.02■□□□□ 0.31
TRAPPC11-202ENST00000357207 ZKSCAN8Q15776 578 aaPredicted RBP17.02■□□□□ 0.31
TRAPPC11-202ENST00000357207 C10orf76Q5T2E6 689 aa17.02■□□□□ 0.31
TRAPPC11-202ENST00000357207 ZBTB1Q9Y2K1 713 aa17.02■□□□□ 0.31
TRAPPC11-202ENST00000357207 CD2APQ9Y5K6 639 aa17.02■□□□□ 0.31
TRAPPC11-202ENST00000357207 RFX7Q2KHR2 1363 aa17.02■□□□□ 0.31
TRAPPC11-202ENST00000357207 PREX2Q70Z35 1606 aa17.02■□□□□ 0.31
TRAPPC11-202ENST00000357207 PDE6CP51160 858 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 LRRC63Q05C16 580 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 SHC4Q6S5L8 630 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 RPAINQ86UA6 219 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 TBC1D10CQ8IV04 446 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 RSAD2Q8WXG1 361 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 SEC31BQ9NQW1 1179 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 PTPN22Q9Y2R2 807 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 RABGAP1Q9Y3P9 1069 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 PARP3Q9Y6F1 533 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 CTIFO43310 598 aaKnown RBP17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 HSPA6P17066 643 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 ATF7P17544 494 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 GGCXP38435 758 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 NEK9Q8TD19 979 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 KCNG1Q9UIX4 513 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 FRMD3A2A2Y4 597 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 K7ENM7 598 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 MYO1FO00160 1098 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 FOSP01100 380 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 IL6STP40189 918 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 BTDP43251 543 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 PSMD2Q13200 908 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 RASGRF1Q13972 1273 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 ODR4Q5SWX8 454 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 CASC4Q6P4E1 433 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 SEPT14Q6ZU15 432 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 FBXO11Q86XK2 927 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 DPF2Q92785 391 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 FMO2Q99518 471 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 C1orf112Q9NSG2 853 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 ERBB3P21860 1342 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 CYP2D7A0A087X1C5 515 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 GCFC2P16383 781 aaKnown RBP17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 GUCY2CP25092 1073 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 EIF3BP55884 814 aaKnown RBP17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 SESN3P58005 492 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 ALKBH5Q6P6C2 394 aaKnown RBP17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 FAM186BQ8IYM0 893 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 CHURC1Q8WUH1 139 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 ATP2A3Q93084 1043 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 IQGAP3Q86VI3 1631 aa17.01■□□□□ 0.31
TRAPPC11-202ENST00000357207 ZSCAN20P17040 1043 aaPredicted RBP17■□□□□ 0.31
TRAPPC11-202ENST00000357207 SEPT6Q14141 434 aa17■□□□□ 0.31
TRAPPC11-202ENST00000357207 EMILIN3Q9NT22 766 aa17■□□□□ 0.31
TRAPPC11-202ENST00000357207 EFCAB6Q5THR3 1501 aa17■□□□□ 0.31
TRAPPC11-202ENST00000357207 STK10O94804 968 aaKnown RBP17■□□□□ 0.31
TRAPPC11-202ENST00000357207 PLEKHA8P1O95397 391 aa17■□□□□ 0.31
TRAPPC11-202ENST00000357207 CUL1Q13616 776 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms