RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 ANKS1AQ92625 1134 aa12.45□□□□□ -0.42
CAPN3-204ENST00000356316 MTG1Q9BT17 334 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-204ENST00000356316 TRPV6Q9H1D0 765 aa12.45□□□□□ -0.42
CAPN3-204ENST00000356316 TTYH1Q9H313 450 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-204ENST00000356316 IL23AQ9NPF7 189 aa12.45□□□□□ -0.42
CAPN3-204ENST00000356316 SUPT16HQ9Y5B9 1047 aaKnown RBP12.45□□□□□ -0.42
CAPN3-204ENST00000356316 LAMA4Q16363 1823 aa12.44□□□□□ -0.42
CAPN3-204ENST00000356316 TNKSO95271 1327 aa12.44□□□□□ -0.42
CAPN3-204ENST00000356316 B4GALT4O60513 344 aa12.44□□□□□ -0.42
CAPN3-204ENST00000356316 TXNP10599 105 aaKnown RBP12.44□□□□□ -0.42
CAPN3-204ENST00000356316 PTGS1P23219 599 aa12.44□□□□□ -0.42
CAPN3-204ENST00000356316 DNAJB2P25686 324 aa12.44□□□□□ -0.42
CAPN3-204ENST00000356316 CCL23P55773 120 aa12.44□□□□□ -0.42
CAPN3-204ENST00000356316 TTLL4Q14679 1199 aa12.44□□□□□ -0.42
CAPN3-204ENST00000356316 CDC37Q16543 378 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-204ENST00000356316 FAM47CQ5HY64 1035 aa12.44□□□□□ -0.42
CAPN3-204ENST00000356316 C16orf59Q7L2K0 433 aa12.44□□□□□ -0.42
CAPN3-204ENST00000356316 FBXO11Q86XK2 927 aa12.44□□□□□ -0.42
CAPN3-204ENST00000356316 ENAHQ8N8S7 591 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-204ENST00000356316 MAFAQ8NHW3 353 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-204ENST00000356316 NSUN6Q8TEA1 469 aaKnown RBP12.44□□□□□ -0.42
CAPN3-204ENST00000356316 TIFAQ96CG3 184 aa12.44□□□□□ -0.42
CAPN3-204ENST00000356316 CPVLQ9H3G5 476 aa12.44□□□□□ -0.42
CAPN3-204ENST00000356316 MRPL11Q9Y3B7 192 aaKnown RBP12.44□□□□□ -0.42
CAPN3-204ENST00000356316 LRRC37A2A6NM11 1700 aa12.44□□□□□ -0.42
CAPN3-204ENST00000356316 GRIN2DO15399 1336 aa12.43□□□□□ -0.42
CAPN3-204ENST00000356316 LCTP09848 1927 aa12.43□□□□□ -0.42
CAPN3-204ENST00000356316 MYH6P13533 1939 aa12.43□□□□□ -0.42
CAPN3-204ENST00000356316 ERICH2A1L162 156 aa12.43□□□□□ -0.42
CAPN3-204ENST00000356316 IWS1Q96ST2 819 aa12.43□□□□□ -0.42
CAPN3-204ENST00000356316 ALDH8A1Q9H2A2 487 aaPredicted RBP12.43□□□□□ -0.42
CAPN3-204ENST00000356316 ZNF576Q9H609 170 aa12.43□□□□□ -0.42
CAPN3-204ENST00000356316 MSRAQ9UJ68 235 aa12.43□□□□□ -0.42
CAPN3-204ENST00000356316 A6NJR5 290 aa12.42□□□□□ -0.42
CAPN3-204ENST00000356316 EDNRBP24530 442 aa12.42□□□□□ -0.42
CAPN3-204ENST00000356316 CHMP4BP1P59074 171 aa12.42□□□□□ -0.42
CAPN3-204ENST00000356316 PURAQ00577 322 aaKnown RBP12.42□□□□□ -0.42
CAPN3-204ENST00000356316 TRAF1Q13077 416 aa12.42□□□□□ -0.42
CAPN3-204ENST00000356316 RAB30Q15771 203 aa12.42□□□□□ -0.42
CAPN3-204ENST00000356316 STXBP2Q15833 593 aa12.42□□□□□ -0.42
CAPN3-204ENST00000356316 TTC22Q5TAA0 569 aa12.42□□□□□ -0.42
CAPN3-204ENST00000356316 ARHGEF16Q5VV41 709 aa12.42□□□□□ -0.42
CAPN3-204ENST00000356316 SEPT14Q6ZU15 432 aa12.42□□□□□ -0.42
CAPN3-204ENST00000356316 OTOP2Q7RTS6 562 aa12.42□□□□□ -0.42
CAPN3-204ENST00000356316 RETREG2Q8NC44 543 aa12.42□□□□□ -0.42
CAPN3-204ENST00000356316 HERVK_113Q902F9 699 aa12.42□□□□□ -0.42
CAPN3-204ENST00000356316 RMDN3Q96TC7 470 aa12.42□□□□□ -0.42
CAPN3-204ENST00000356316 NOC4LQ9BVI4 516 aaKnown RBP12.42□□□□□ -0.42
CAPN3-204ENST00000356316 AMNQ9BXJ7 453 aa12.42□□□□□ -0.42
CAPN3-204ENST00000356316 NOD1Q9Y239 953 aa12.42□□□□□ -0.42
CAPN3-204ENST00000356316 PRUNE2Q8WUY3 3088 aa12.41□□□□□ -0.42
CAPN3-204ENST00000356316 GRXCR1A8MXD5 290 aa12.41□□□□□ -0.42
CAPN3-204ENST00000356316 KLRF2D3W0D1 207 aa12.41□□□□□ -0.42
CAPN3-204ENST00000356316 GRIN2CQ14957 1233 aa12.41□□□□□ -0.42
CAPN3-204ENST00000356316 QRICH1Q2TAL8 776 aa12.41□□□□□ -0.42
CAPN3-204ENST00000356316 NBPF20Q3BBV1 942 aa12.41□□□□□ -0.42
CAPN3-204ENST00000356316 SYTL5Q8TDW5 730 aaPredicted RBP12.41□□□□□ -0.42
CAPN3-204ENST00000356316 TBC1D5Q92609 795 aa12.41□□□□□ -0.42
CAPN3-204ENST00000356316 TAAR1Q96RJ0 339 aa12.41□□□□□ -0.42
CAPN3-204ENST00000356316 PBX4Q9BYU1 374 aa12.41□□□□□ -0.42
CAPN3-204ENST00000356316 JMJD4Q9H9V9 463 aa12.41□□□□□ -0.42
CAPN3-204ENST00000356316 TRMT13Q9NUP7 481 aaKnown RBP12.41□□□□□ -0.42
CAPN3-204ENST00000356316 SLC4A7Q9Y6M7 1214 aa12.41□□□□□ -0.42
CAPN3-204ENST00000356316 ZBBXA8MT70 800 aa12.4□□□□□ -0.42
CAPN3-204ENST00000356316 EIF3JO75822 258 aaKnown RBP12.4□□□□□ -0.42
CAPN3-204ENST00000356316 CFBP00751 764 aa12.4□□□□□ -0.42
CAPN3-204ENST00000356316 GH1P01241 217 aa12.4□□□□□ -0.42
CAPN3-204ENST00000356316 PFKMP08237 780 aa12.4□□□□□ -0.42
CAPN3-204ENST00000356316 CYP2C9P11712 490 aa12.4□□□□□ -0.42
CAPN3-204ENST00000356316 CASTP20810 708 aaKnown RBP12.4□□□□□ -0.42
CAPN3-204ENST00000356316 PTPN11Q06124 597 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-204ENST00000356316 SART3Q15020 963 aaKnown RBP12.4□□□□□ -0.42
CAPN3-204ENST00000356316 RASIP1Q5U651 963 aa12.4□□□□□ -0.42
CAPN3-204ENST00000356316 NFRKBQ6P4R8 1299 aa12.4□□□□□ -0.42
CAPN3-204ENST00000356316 CHST3Q7LGC8 479 aa12.4□□□□□ -0.42
CAPN3-204ENST00000356316 RALYLQ86SE5 291 aaKnown RBP12.4□□□□□ -0.42
CAPN3-204ENST00000356316 COPS5Q92905 334 aa12.4□□□□□ -0.42
CAPN3-204ENST00000356316 GAS2L1Q99501 681 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-204ENST00000356316 SLC28A3Q9HAS3 691 aa12.4□□□□□ -0.42
CAPN3-204ENST00000356316 MAP3K20Q9NYL2 800 aaKnown RBP12.4□□□□□ -0.42
CAPN3-204ENST00000356316 UMODL1Q5DID0 1318 aa12.39□□□□□ -0.43
CAPN3-204ENST00000356316 CDH23Q9H251 3354 aa12.39□□□□□ -0.43
CAPN3-204ENST00000356316 IFIT3O14879 490 aaKnown RBP12.39□□□□□ -0.43
CAPN3-204ENST00000356316 ACTN1P12814 892 aa12.39□□□□□ -0.43
CAPN3-204ENST00000356316 PBX2P40425 430 aa12.39□□□□□ -0.43
CAPN3-204ENST00000356316 BFSP2Q13515 415 aa12.39□□□□□ -0.43
CAPN3-204ENST00000356316 LY6KQ17RY6 165 aa12.39□□□□□ -0.43
CAPN3-204ENST00000356316 DEFB128Q7Z7B8 93 aa12.39□□□□□ -0.43
CAPN3-204ENST00000356316 SCLYQ96I15 445 aa12.39□□□□□ -0.43
CAPN3-204ENST00000356316 WNT8AQ9H1J5 351 aa12.39□□□□□ -0.43
CAPN3-204ENST00000356316 PCDHA1Q9Y5I3 950 aa12.39□□□□□ -0.43
CAPN3-204ENST00000356316 ZBTB5O15062 677 aa12.38□□□□□ -0.43
CAPN3-204ENST00000356316 NR3C2P08235 984 aa12.38□□□□□ -0.43
CAPN3-204ENST00000356316 EIF2AK2P19525 551 aaKnown RBP12.38□□□□□ -0.43
CAPN3-204ENST00000356316 CHMLP26374 656 aa12.38□□□□□ -0.43
CAPN3-204ENST00000356316 PDE4AP27815 886 aa12.38□□□□□ -0.43
CAPN3-204ENST00000356316 RFC2P35250 354 aa12.38□□□□□ -0.43
CAPN3-204ENST00000356316 LAMC2Q13753 1193 aa12.38□□□□□ -0.43
CAPN3-204ENST00000356316 WTAPQ15007 396 aa12.38□□□□□ -0.43
CAPN3-204ENST00000356316 SEC23AQ15436 765 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms