RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 MAP3K7O43318 606 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 CFAP221Q4G0U5 840 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 SP8Q8IXZ3 490 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 MMP19Q99542 508 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 DENND3A2RUS2 1198 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 TBC1D10BQ4KMP7 808 aaPredicted RBP12.32□□□□□ -0.44
FN1-204ENST00000356005 RBM46Q8TBY0 533 aaKnown RBP12.32□□□□□ -0.44
FN1-204ENST00000356005 CEP170BQ9Y4F5 1589 aaPredicted RBP12.32□□□□□ -0.44
FN1-204ENST00000356005 SCYL2Q6P3W7 929 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 SLC16A10Q8TF71 515 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 NAPGQ99747 312 aaPredicted RBP12.32□□□□□ -0.44
FN1-204ENST00000356005 HACL1Q9UJ83 578 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 WDR64B1ANS9 1081 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 USP17L10C9JJH3 530 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 I3L4J1 428 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 MECOMQ03112 1051 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 ADALQ6DHV7 355 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 C7orf31Q8N865 590 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 RUNDC3BQ96NL0 473 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 NCAPGQ9BPX3 1015 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 LRRC4Q9HBW1 653 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 TYW1Q9NV66 732 aaKnown RBP12.32□□□□□ -0.44
FN1-204ENST00000356005 SAMD15Q9P1V8 674 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 KIAA1024Q9UPX6 916 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 TACC3Q9Y6A5 838 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 PPARGP37231 505 aaPredicted RBP12.32□□□□□ -0.44
FN1-204ENST00000356005 ZMYM1Q5SVZ6 1142 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 PCDHB4Q9Y5E5 795 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 GDF11O95390 407 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 ADORA1P30542 326 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 CBX1P83916 185 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 RAB3IPQ96QF0 476 aaPredicted RBP12.32□□□□□ -0.44
FN1-204ENST00000356005 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.32□□□□□ -0.448e-28■■■□□ 14.7
FN1-204ENST00000356005 hCG_1642624A0A1W2PR95 340 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 SORBS3O60504 671 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 IGSF3O75054 1194 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 RPS6KA1Q15418 735 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 CCDC186Q7Z3E2 898 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 CCDC51Q96ER9 411 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 NDUFB9Q9Y6M9 179 aa12.32□□□□□ -0.44
FN1-204ENST00000356005 MFAP3P55082 362 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 TNFAIP2Q03169 654 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 SECISBP2LQ93073 1101 aaKnown RBP12.31□□□□□ -0.44
FN1-204ENST00000356005 GPBP1L1Q9HC44 474 aaPredicted RBP12.31□□□□□ -0.44
FN1-204ENST00000356005 CPSF1Q10570 1443 aaKnown RBP12.31□□□□□ -0.44
FN1-204ENST00000356005 NRKQ7Z2Y5 1582 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 KBTBD13C9JR72 458 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 LMNB2Q03252 620 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 TOPORSQ9NS56 1045 aaPredicted RBP12.31□□□□□ -0.44
FN1-204ENST00000356005 SPATA31E1Q6ZUB1 1445 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 CDC42EP1Q00587 391 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 C8orf74Q6P047 294 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 PNMA8AQ86V59 439 aaPredicted RBP12.31□□□□□ -0.44
FN1-204ENST00000356005 C10orf67Q8IYJ2 551 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 SEC62Q99442 399 aaKnown RBP12.31□□□□□ -0.44
FN1-204ENST00000356005 LSM14BQ9BX40 385 aaKnown RBP12.31□□□□□ -0.44
FN1-204ENST00000356005 RIC8AQ9NPQ8 531 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 MYO1AQ9UBC5 1043 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 STK17AQ9UEE5 414 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 LDHAP00338 332 aaKnown RBP12.31□□□□□ -0.44
FN1-204ENST00000356005 HSPA1LP34931 641 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 NEDD9Q14511 834 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 C4orf50Q6ZRC1 276 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 ARHGEF40Q8TER5 1519 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 PTGDRQ13258 359 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 CPLX4Q7Z7G2 160 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 RYBPQ8N488 228 aaPredicted RBP12.31□□□□□ -0.44
FN1-204ENST00000356005 PSMC2P35998 433 aaKnown RBP12.31□□□□□ -0.44
FN1-204ENST00000356005 EPSTI1Q96J88 318 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 SEC31BQ9NQW1 1179 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 CALCOCO1Q9P1Z2 691 aa12.31□□□□□ -0.44
FN1-204ENST00000356005 MMP14P50281 582 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 TXNRD1Q16881 649 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 RNF219Q5W0B1 726 aaPredicted RBP12.3□□□□□ -0.44
FN1-204ENST00000356005 EAF2Q96CJ1 260 aaPredicted RBP12.3□□□□□ -0.44
FN1-204ENST00000356005 SLITRK6Q9H5Y7 841 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 CDK8P49336 464 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 MCM6Q14566 821 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 ARL13BQ3SXY8 428 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 CCDC105Q8IYK2 499 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 K7ERI5 159 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 PFKFB2O60825 505 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 PI4K2BQ8TCG2 481 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 NT5C1BQ96P26 610 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 PARVGQ9HBI0 331 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 ZFYVE28Q9HCC9 887 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 ABCC12Q96J65 1359 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 DYNC1I1O14576 645 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 GOLGA8HP0CJ92 632 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 KCNJ6P48051 423 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 RPS6KA2Q15349 733 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 UIMC1Q96RL1 719 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 KATNAL1Q9BW62 490 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 RBSNQ9H1K0 784 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 TNNQ9UQP3 1299 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 S100BP04271 92 aaPredicted RBP12.3□□□□□ -0.44
FN1-204ENST00000356005 MYL7Q01449 175 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 KYAT1Q16773 422 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 PPP4R1Q8TF05 950 aa12.3□□□□□ -0.44
FN1-204ENST00000356005 PIDD1Q9HB75 910 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms