RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 GJA3Q9Y6H8 435 aa8.55□□□□□ -1.04
VANGL1-202ENST00000355485 SART1O43290 800 aaKnown RBP8.54□□□□□ -1.04
VANGL1-202ENST00000355485 SNRPA1P09661 255 aaKnown RBP8.54□□□□□ -1.04
VANGL1-202ENST00000355485 PRR29P0C7W0 189 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 SMTNP53814 917 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 NDUFA10O95299 355 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 KITP10721 976 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 EEF1DP29692 281 aaKnown RBP8.54□□□□□ -1.04
VANGL1-202ENST00000355485 EIF4A3P38919 411 aaKnown RBP8.54□□□□□ -1.04
VANGL1-202ENST00000355485 CCHCR1Q8TD31 782 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 TMEM87BQ96K49 555 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 MAGED2Q9UNF1 606 aaPredicted RBP8.54□□□□□ -1.04
VANGL1-202ENST00000355485 FOXD4Q12950 439 aaPredicted RBP8.54□□□□□ -1.04
VANGL1-202ENST00000355485 ABI1Q8IZP0 508 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 C19orf44Q9H6X5 657 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 ESRRAP11474 423 aaPredicted RBP8.54□□□□□ -1.04
VANGL1-202ENST00000355485 EAPPQ56P03 285 aaPredicted RBP8.54□□□□□ -1.04
VANGL1-202ENST00000355485 MYCT1Q8N699 235 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 CYP2J2P51589 502 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 CACNB1Q02641 598 aaPredicted RBP8.54□□□□□ -1.04
VANGL1-202ENST00000355485 FBXO31Q5XUX0 539 aaPredicted RBP8.54□□□□□ -1.04
VANGL1-202ENST00000355485 NLRP7Q8WX94 980 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 SETDB2Q96T68 719 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 PALMDQ9NP74 551 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 IPO11Q9UI26 975 aaKnown RBP8.54□□□□□ -1.04
VANGL1-202ENST00000355485 ATP1A1P05023 1023 aaKnown RBP8.54□□□□□ -1.04
VANGL1-202ENST00000355485 ANKRD20A4Q4UJ75 823 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 ANKRD20A8PQ5CZ79 823 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 ANKRD20A2Q5SQ80 823 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 LIN9Q5TKA1 542 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 ANKRD20A1Q5TYW2 823 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 TMTC3Q6ZXV5 915 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 GANCQ8TET4 914 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 LRGUKQ96M69 825 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 TM6SF1Q9BZW5 370 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 THEGQ9P2T0 379 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 BAG5Q9UL15 447 aa8.54□□□□□ -1.04
VANGL1-202ENST00000355485 PAX7P23759 505 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 TMEM259Q4ZIN3 620 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 IKBKBO14920 756 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 UBTFL6P0CB48 400 aaPredicted RBP8.53□□□□□ -1.04
VANGL1-202ENST00000355485 GNAQP50148 359 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 SLC12A2P55011 1212 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 SH3BGRP55822 239 aaPredicted RBP8.53□□□□□ -1.04
VANGL1-202ENST00000355485 ZNF589Q86UQ0 364 aaPredicted RBP8.53□□□□□ -1.04
VANGL1-202ENST00000355485 FAM133AQ8N9E0 248 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 NSUN7Q8NE18 718 aaKnown RBP8.53□□□□□ -1.04
VANGL1-202ENST00000355485 DTX3LQ8TDB6 740 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 PPP4R1Q8TF05 950 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 RSAD2Q8WXG1 361 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 ATP6V1E2Q96A05 226 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 IWS1Q96ST2 819 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 TTC1Q99614 292 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 TUBGCP2Q9BSJ2 902 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 GJB4Q9NTQ9 266 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 DAAM1Q9Y4D1 1078 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 DUOX2Q9NRD8 1548 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 PLS3P13797 630 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 ATF7P17544 494 aaPredicted RBP8.53□□□□□ -1.04
VANGL1-202ENST00000355485 NCF2P19878 526 aaPredicted RBP8.53□□□□□ -1.04
VANGL1-202ENST00000355485 E4F1Q66K89 784 aaPredicted RBP8.53□□□□□ -1.04
VANGL1-202ENST00000355485 FASTKD5Q7L8L6 764 aaKnown RBP8.53□□□□□ -1.04
VANGL1-202ENST00000355485 MCF2L2Q86YR7 1114 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 MAML1Q92585 1016 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 P3H4Q92791 437 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 ZMYND12Q9H0C1 365 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 LCMT1Q9UIC8 334 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 SCINQ9Y6U3 715 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 PDHBP11177 359 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 CASP2P42575 452 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 A0A0G2JND7 137 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 UBXN8O00124 270 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 S100BP04271 92 aaPredicted RBP8.53□□□□□ -1.04
VANGL1-202ENST00000355485 CHGBP05060 677 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 NOSTRINQ8IVI9 506 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 AIFM3Q96NN9 605 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 MRPL44Q9H9J2 332 aaKnown RBP8.53□□□□□ -1.04
VANGL1-202ENST00000355485 RAPGEF3O95398 923 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 ADCY9O60503 1353 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 RIMS2Q9UQ26 1411 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 PPP1R2P41236 205 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 CCZ1BP86790 482 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 CCZ1P86791 482 aaPredicted RBP8.53□□□□□ -1.04
VANGL1-202ENST00000355485 MMEL1Q495T6 779 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 SLC30A9Q6PML9 568 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 TEKT2Q9UIF3 430 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 PACSIN2Q9UNF0 486 aaPredicted RBP8.53□□□□□ -1.04
VANGL1-202ENST00000355485 KDM5DQ9BY66 1539 aa8.53□□□□□ -1.04
VANGL1-202ENST00000355485 ADGRL2O95490 1459 aa8.52□□□□□ -1.04
VANGL1-202ENST00000355485 CDC25AP30304 524 aa8.52□□□□□ -1.04
VANGL1-202ENST00000355485 CORO7P57737 925 aa8.52□□□□□ -1.04
VANGL1-202ENST00000355485 WASHC5Q12768 1159 aa8.52□□□□□ -1.04
VANGL1-202ENST00000355485 KRT31Q15323 416 aa8.52□□□□□ -1.04
VANGL1-202ENST00000355485 KIF2BQ8N4N8 673 aa8.52□□□□□ -1.04
VANGL1-202ENST00000355485 DCLK2Q8N568 766 aa8.52□□□□□ -1.04
VANGL1-202ENST00000355485 SUPT20HQ8NEM7 779 aa8.52□□□□□ -1.04
VANGL1-202ENST00000355485 TRIM56Q9BRZ2 755 aaKnown RBP8.52□□□□□ -1.04
VANGL1-202ENST00000355485 GEMIN8Q9NWZ8 242 aaKnown RBP8.52□□□□□ -1.04
VANGL1-202ENST00000355485 TFCP2L1Q9NZI6 479 aa8.52□□□□□ -1.04
VANGL1-202ENST00000355485 LRFN2Q9ULH4 789 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms