RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 CCDC91Q7Z6B0 441 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 LRRC45Q96CN5 670 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 KANSL2Q9H9L4 492 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 HACL1Q9UJ83 578 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 A6NNZ2 444 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 E7EVH7 732 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 CASP8Q14790 479 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 TUBB8Q3ZCM7 444 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 TTLL11Q8NHH1 800 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 PLVAPQ9BX97 442 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 ZNF341Q9BYN7 854 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 UTP11Q9Y3A2 253 aaKnown RBP13.57□□□□□ -0.24
COLCA1-201ENST00000355430 UBN2Q6ZU65 1347 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 PLEKHA8P1O95397 391 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 SCARF1Q14162 830 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 OTUD6AQ7L8S5 288 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 MTRF1LQ9UGC7 380 aaKnown RBP13.57□□□□□ -0.24
COLCA1-201ENST00000355430 WDR19Q8NEZ3 1342 aa13.56□□□□□ -0.24
COLCA1-201ENST00000355430 PRPF3O43395 683 aaKnown RBP13.56□□□□□ -0.24
COLCA1-201ENST00000355430 CALUO43852 315 aaPredicted RBP13.56□□□□□ -0.24
COLCA1-201ENST00000355430 EEF1GP26641 437 aaKnown RBP13.56□□□□□ -0.24
COLCA1-201ENST00000355430 GJC1P36383 396 aa13.56□□□□□ -0.24
COLCA1-201ENST00000355430 RABL6Q3YEC7 729 aaPredicted RBP13.56□□□□□ -0.24
COLCA1-201ENST00000355430 GBP6Q6ZN66 633 aa13.56□□□□□ -0.24
COLCA1-201ENST00000355430 FOXP4Q8IVH2 680 aaPredicted RBP13.56□□□□□ -0.24
COLCA1-201ENST00000355430 SERPINB13Q9UIV8 391 aa13.56□□□□□ -0.24
COLCA1-201ENST00000355430 TRPC6Q9Y210 931 aa13.56□□□□□ -0.24
COLCA1-201ENST00000355430 NDUFA10O95299 355 aa13.56□□□□□ -0.24
COLCA1-201ENST00000355430 EZRP15311 586 aaKnown RBP13.56□□□□□ -0.24
COLCA1-201ENST00000355430 ZSCAN20P17040 1043 aaPredicted RBP13.56□□□□□ -0.24
COLCA1-201ENST00000355430 TCP11X2Q5H9J9 407 aa13.56□□□□□ -0.24
COLCA1-201ENST00000355430 KCNB2Q92953 911 aa13.56□□□□□ -0.24
COLCA1-201ENST00000355430 ZCCHC17Q9NP64 241 aaKnown RBP13.56□□□□□ -0.24
COLCA1-201ENST00000355430 SAMD15Q9P1V8 674 aa13.56□□□□□ -0.24
COLCA1-201ENST00000355430 TRAPPC10P48553 1259 aa13.56□□□□□ -0.24
COLCA1-201ENST00000355430 DEFB132Q7Z7B7 95 aa13.56□□□□□ -0.24
COLCA1-201ENST00000355430 METTL16Q86W50 562 aaKnown RBP13.56□□□□□ -0.24
COLCA1-201ENST00000355430 LRRC47Q8N1G4 583 aaKnown RBP13.56□□□□□ -0.24
COLCA1-201ENST00000355430 BCAS4Q8TDM0 211 aa13.56□□□□□ -0.24
COLCA1-201ENST00000355430 MTFR1LQ9H019 292 aa13.56□□□□□ -0.24
COLCA1-201ENST00000355430 PCDHA4Q9UN74 947 aa13.56□□□□□ -0.24
COLCA1-201ENST00000355430 MROH1Q8NDA8 1641 aa13.56□□□□□ -0.24
COLCA1-201ENST00000355430 SLC8A3P57103 927 aa13.56□□□□□ -0.24
COLCA1-201ENST00000355430 RSPH3Q86UC2 560 aa13.56□□□□□ -0.24
COLCA1-201ENST00000355430 FNBP1Q96RU3 617 aa13.56□□□□□ -0.24
COLCA1-201ENST00000355430 WDR24Q96S15 920 aa13.56□□□□□ -0.24
COLCA1-201ENST00000355430 TCP1P17987 556 aaKnown RBP13.55□□□□□ -0.24
COLCA1-201ENST00000355430 TNFAIP3P21580 790 aa13.55□□□□□ -0.24
COLCA1-201ENST00000355430 CCT5P48643 541 aa13.55□□□□□ -0.24
COLCA1-201ENST00000355430 LIG3P49916 1009 aa13.55□□□□□ -0.24
COLCA1-201ENST00000355430 PPP1R7Q15435 360 aa13.55□□□□□ -0.24
COLCA1-201ENST00000355430 NEK8Q86SG6 692 aa13.55□□□□□ -0.24
COLCA1-201ENST00000355430 STK36Q9NRP7 1315 aa13.55□□□□□ -0.24
COLCA1-201ENST00000355430 TEX33O43247 280 aa13.55□□□□□ -0.24
COLCA1-201ENST00000355430 TMED8Q6PL24 325 aaPredicted RBP13.55□□□□□ -0.24
COLCA1-201ENST00000355430 MYOCDQ8IZQ8 938 aa13.55□□□□□ -0.24
COLCA1-201ENST00000355430 KCNK9Q9NPC2 374 aa13.55□□□□□ -0.24
COLCA1-201ENST00000355430 FRMPD2Q68DX3 1309 aaPredicted RBP13.55□□□□□ -0.24
COLCA1-201ENST00000355430 KLRF2D3W0D1 207 aa13.55□□□□□ -0.24
COLCA1-201ENST00000355430 RASSF7Q02833 373 aa13.55□□□□□ -0.24
COLCA1-201ENST00000355430 CUL4BQ13620 913 aa13.55□□□□□ -0.24
COLCA1-201ENST00000355430 VIMP08670 466 aaKnown RBP13.55□□□□□ -0.24
COLCA1-201ENST00000355430 HARSP12081 509 aaKnown RBP13.55□□□□□ -0.24
COLCA1-201ENST00000355430 CHRNA5P30532 468 aa13.55□□□□□ -0.24
COLCA1-201ENST00000355430 SF3A3Q12874 501 aaKnown RBP eCLIP13.55□□□□□ -0.24
COLCA1-201ENST00000355430 ZNF354CQ86Y25 554 aa13.55□□□□□ -0.24
COLCA1-201ENST00000355430 P2RX5Q93086 422 aa13.55□□□□□ -0.24
COLCA1-201ENST00000355430 NUCKS1Q9H1E3 243 aaKnown RBP13.55□□□□□ -0.24
COLCA1-201ENST00000355430 PPANQ9NQ55 473 aaKnown RBP13.55□□□□□ -0.24
COLCA1-201ENST00000355430 MRFAP1Q9Y605 127 aa13.55□□□□□ -0.24
COLCA1-201ENST00000355430 KCNK3O14649 394 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 POLR2FP61218 127 aaKnown RBP13.54□□□□□ -0.24
COLCA1-201ENST00000355430 CEP85LQ5SZL2 805 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 GPATCH4Q5T3I0 446 aaKnown RBP13.54□□□□□ -0.24
COLCA1-201ENST00000355430 SEL1L2Q5TEA6 688 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 PEX26Q7Z412 305 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 DAAM2Q86T65 1068 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 HOOK3Q86VS8 718 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 CCDC97Q96F63 343 aaPredicted RBP13.54□□□□□ -0.24
COLCA1-201ENST00000355430 FRMD4BQ9Y2L6 1034 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 ABCC12Q96J65 1359 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 FDPSP14324 419 aaKnown RBP13.54□□□□□ -0.24
COLCA1-201ENST00000355430 MTF1Q14872 753 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 COA7Q96BR5 231 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 CEP83Q9Y592 693 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 MROH7-TTC4A0A0A0MT08 1334 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 ARHGAP25P42331 645 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 KCTD16Q68DU8 428 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 RUFY4Q6ZNE9 571 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 ZNF579Q8NAF0 562 aaKnown RBP13.54□□□□□ -0.24
COLCA1-201ENST00000355430 NHEJ1Q9H9Q4 299 aaPredicted RBP13.54□□□□□ -0.24
COLCA1-201ENST00000355430 GDAQ9Y2T3 454 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 CDHR2Q9BYE9 1310 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 TTLL1O95922 423 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 CRKP46108 304 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 ST3GAL1Q11201 340 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 CCDC50Q8IVM0 306 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 STAG1Q8WVM7 1258 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 CRAMP1Q96RY5 1269 aa13.54□□□□□ -0.24
COLCA1-201ENST00000355430 ZNRF3Q9ULT6 936 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms