RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 ERVK-24P63145 666 aa10.4□□□□□ -0.74
SMG6-202ENST00000354901 IRX1P78414 480 aaPredicted RBP10.4□□□□□ -0.74
SMG6-202ENST00000354901 SNCBQ16143 134 aa10.4□□□□□ -0.74
SMG6-202ENST00000354901 PFKFB3Q16875 520 aaPredicted RBP10.4□□□□□ -0.74
SMG6-202ENST00000354901 FBXO33Q7Z6M2 555 aa10.4□□□□□ -0.74
SMG6-202ENST00000354901 TGFBRAP1Q8WUH2 860 aa10.4□□□□□ -0.74
SMG6-202ENST00000354901 GJD4Q96KN9 370 aaPredicted RBP10.4□□□□□ -0.74
SMG6-202ENST00000354901 HAUS2Q9NVX0 235 aa10.4□□□□□ -0.74
SMG6-202ENST00000354901 DDX20Q9UHI6 824 aaKnown RBP10.4□□□□□ -0.74
SMG6-202ENST00000354901 RAB21Q9UL25 225 aa10.4□□□□□ -0.74
SMG6-202ENST00000354901 MYBL2P10244 700 aa10.4□□□□□ -0.74
SMG6-202ENST00000354901 HPDP32754 393 aaPredicted RBP10.4□□□□□ -0.74
SMG6-202ENST00000354901 KIF5BP33176 963 aa10.4□□□□□ -0.74
SMG6-202ENST00000354901 UBA7P41226 1012 aa10.4□□□□□ -0.74
SMG6-202ENST00000354901 PMS1P54277 932 aaKnown RBP10.4□□□□□ -0.74
SMG6-202ENST00000354901 GUCY1A3Q02108 690 aa10.4□□□□□ -0.74
SMG6-202ENST00000354901 PPFIA1Q13136 1202 aa10.4□□□□□ -0.74
SMG6-202ENST00000354901 SF3B3Q15393 1217 aaKnown RBP10.4□□□□□ -0.74
SMG6-202ENST00000354901 GRIK5Q16478 980 aa10.4□□□□□ -0.74
SMG6-202ENST00000354901 PDXDC2PQ6P474 469 aa10.4□□□□□ -0.74
SMG6-202ENST00000354901 CNGA4Q8IV77 575 aa10.4□□□□□ -0.74
SMG6-202ENST00000354901 MAPKAPK5Q8IW41 473 aa10.4□□□□□ -0.74
SMG6-202ENST00000354901 MSANTD4Q8NCY6 345 aa10.4□□□□□ -0.74
SMG6-202ENST00000354901 RRP36Q96EU6 259 aaKnown RBP10.4□□□□□ -0.74
SMG6-202ENST00000354901 SELENOOQ9BVL4 669 aa10.4□□□□□ -0.74
SMG6-202ENST00000354901 SBF2Q86WG5 1849 aa10.4□□□□□ -0.75
SMG6-202ENST00000354901 DOCK2Q92608 1830 aa10.4□□□□□ -0.75
SMG6-202ENST00000354901 OPLAHO14841 1288 aa10.39□□□□□ -0.75
SMG6-202ENST00000354901 GNPATO15228 680 aa10.39□□□□□ -0.75
SMG6-202ENST00000354901 GTPBP6O43824 516 aaPredicted RBP10.39□□□□□ -0.75
SMG6-202ENST00000354901 PRPF6O94906 941 aaKnown RBP10.39□□□□□ -0.75
SMG6-202ENST00000354901 TSPY3P0CV98 308 aa10.39□□□□□ -0.75
SMG6-202ENST00000354901 TSPY8P0CW00 308 aa10.39□□□□□ -0.75
SMG6-202ENST00000354901 APBA1Q02410 837 aa10.39□□□□□ -0.75
SMG6-202ENST00000354901 PREPLQ4J6C6 727 aaPredicted RBP10.39□□□□□ -0.75
SMG6-202ENST00000354901 ARMC2Q8NEN0 867 aa10.39□□□□□ -0.75
SMG6-202ENST00000354901 SH3RF3Q8TEJ3 882 aaPredicted RBP10.39□□□□□ -0.75
SMG6-202ENST00000354901 TBC1D22AQ8WUA7 517 aa10.39□□□□□ -0.75
SMG6-202ENST00000354901 TRIM47Q96LD4 638 aa10.39□□□□□ -0.75
SMG6-202ENST00000354901 PCMTD1Q96MG8 357 aaPredicted RBP10.39□□□□□ -0.75
SMG6-202ENST00000354901 TACO1Q9BSH4 297 aaKnown RBP10.39□□□□□ -0.75
SMG6-202ENST00000354901 SLC40A1Q9NP59 571 aa10.39□□□□□ -0.75
SMG6-202ENST00000354901 PPANQ9NQ55 473 aaKnown RBP10.39□□□□□ -0.75
SMG6-202ENST00000354901 IL17RBQ9NRM6 502 aa10.39□□□□□ -0.75
SMG6-202ENST00000354901 DTHD1Q6ZMT9 781 aa10.39□□□□□ -0.75
SMG6-202ENST00000354901 BIN2Q9UBW5 565 aaPredicted RBP10.39□□□□□ -0.75
SMG6-202ENST00000354901 MEFVO15553 781 aaPredicted RBP10.39□□□□□ -0.75
SMG6-202ENST00000354901 ZPR1O75312 459 aa10.39□□□□□ -0.75
SMG6-202ENST00000354901 PBX1P40424 430 aa10.39□□□□□ -0.75
SMG6-202ENST00000354901 MYO1EQ12965 1108 aa10.39□□□□□ -0.75
SMG6-202ENST00000354901 TCP11X2Q5H9J9 407 aa10.39□□□□□ -0.75
SMG6-202ENST00000354901 ZNF444Q8N0Y2 327 aaPredicted RBP10.39□□□□□ -0.75
SMG6-202ENST00000354901 PSMD1Q99460 953 aa10.39□□□□□ -0.75
SMG6-202ENST00000354901 PAIP2Q9BPZ3 127 aaKnown RBP10.39□□□□□ -0.75
SMG6-202ENST00000354901 ABHD10Q9NUJ1 306 aa10.39□□□□□ -0.75
SMG6-202ENST00000354901 MYO6Q9UM54 1294 aa10.39□□□□□ -0.75
SMG6-202ENST00000354901 TIAM2Q8IVF5 1701 aa10.39□□□□□ -0.75
SMG6-202ENST00000354901 ORC4O43929 436 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 BUB1BO60566 1050 aaPredicted RBP10.38□□□□□ -0.75
SMG6-202ENST00000354901 SLC7A5Q01650 507 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 KCNB1Q14721 858 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 LETM2Q2VYF4 491 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 CCDC178Q5BJE1 867 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 CCDC121Q6ZUS5 278 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 B4GALNT4Q76KP1 1039 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 CCDC13Q8IYE1 715 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 SPDYE1Q8NFV5 336 aaPredicted RBP10.38□□□□□ -0.75
SMG6-202ENST00000354901 COG1Q8WTW3 980 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 HPS3Q969F9 1004 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 ARL8AQ96BM9 186 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 UIMC1Q96RL1 719 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 ZCWPW1Q9H0M4 648 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 ATP8A2Q9NTI2 1148 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 ARPP21Q9UBL0 812 aaPredicted RBP10.38□□□□□ -0.75
SMG6-202ENST00000354901 DUOX1Q9NRD9 1551 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 PARP1P09874 1014 aaKnown RBP10.38□□□□□ -0.75
SMG6-202ENST00000354901 C2orf54Q08AI8 447 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 ZNF658Q5TYW1 1059 aaPredicted RBP10.38□□□□□ -0.75
SMG6-202ENST00000354901 RWDD2AQ9UIY3 292 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 COL24A1Q17RW2 1714 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 E7EVH7 732 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 LGR5O75473 907 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 LDHBP07195 334 aaKnown RBP10.38□□□□□ -0.75
SMG6-202ENST00000354901 INHBEP58166 350 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 ACCSLQ4AC99 568 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 DISC1Q9NRI5 854 aa10.38□□□□□ -0.75
SMG6-202ENST00000354901 AFF2P51816 1311 aa10.37□□□□□ -0.75
SMG6-202ENST00000354901 TTC26A0AVF1 554 aa10.37□□□□□ -0.75
SMG6-202ENST00000354901 CYTH3O43739 400 aa10.37□□□□□ -0.75
SMG6-202ENST00000354901 C21orf2O43822 256 aa10.37□□□□□ -0.75
SMG6-202ENST00000354901 CALML3P27482 149 aa10.37□□□□□ -0.75
SMG6-202ENST00000354901 ZKSCAN8Q15776 578 aaPredicted RBP10.37□□□□□ -0.75
SMG6-202ENST00000354901 SLC35G1Q2M3R5 365 aa10.37□□□□□ -0.75
SMG6-202ENST00000354901 THEMIS2Q5TEJ8 643 aa10.37□□□□□ -0.75
SMG6-202ENST00000354901 ZNF483Q8TF39 744 aaPredicted RBP10.37□□□□□ -0.75
SMG6-202ENST00000354901 RSRC1Q96IZ7 334 aaKnown RBP10.37□□□□□ -0.75
SMG6-202ENST00000354901 MMS19Q96T76 1030 aa10.37□□□□□ -0.75
SMG6-202ENST00000354901 PCDHA4Q9UN74 947 aa10.37□□□□□ -0.75
SMG6-202ENST00000354901 CACNA1SQ13698 1873 aa10.37□□□□□ -0.75
SMG6-202ENST00000354901 TAF1LQ8IZX4 1826 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms