RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 FAM114A1Q8IWE2 563 aa21.8■■□□□ 1.08
COL13A1-201ENST00000354547 CCDC155Q8N6L0 562 aa21.8■■□□□ 1.08
COL13A1-201ENST00000354547 SNX29Q8TEQ0 813 aa21.8■■□□□ 1.08
COL13A1-201ENST00000354547 PSMB7Q99436 277 aa21.8■■□□□ 1.08
COL13A1-201ENST00000354547 TTYH3Q9C0H2 523 aa21.8■■□□□ 1.08
COL13A1-201ENST00000354547 TBC1D7Q9P0N9 293 aa21.8■■□□□ 1.08
COL13A1-201ENST00000354547 TNNT3P45378 269 aaPredicted RBP21.8■■□□□ 1.08
COL13A1-201ENST00000354547 ADCY7P51828 1080 aa21.8■■□□□ 1.08
COL13A1-201ENST00000354547 TTBK2Q6IQ55 1244 aa21.8■■□□□ 1.08
COL13A1-201ENST00000354547 KCNK18Q7Z418 384 aa21.8■■□□□ 1.08
COL13A1-201ENST00000354547 TANGO6Q9C0B7 1094 aa21.8■■□□□ 1.08
COL13A1-201ENST00000354547 MPHOSPH10O00566 681 aaKnown RBP21.79■■□□□ 1.08
COL13A1-201ENST00000354547 CASP8Q14790 479 aa21.79■■□□□ 1.08
COL13A1-201ENST00000354547 LARP4BQ92615 738 aaKnown RBP21.79■■□□□ 1.08
COL13A1-201ENST00000354547 PNMA5Q96PV4 448 aa21.79■■□□□ 1.08
COL13A1-201ENST00000354547 PSMD14O00487 310 aa21.79■■□□□ 1.08
COL13A1-201ENST00000354547 MRPS25P82663 173 aaKnown RBP21.79■■□□□ 1.08
COL13A1-201ENST00000354547 RAD51AP2Q09MP3 1159 aa21.78■■□□□ 1.08
COL13A1-201ENST00000354547 GSPT2Q8IYD1 628 aaKnown RBP21.78■■□□□ 1.08
COL13A1-201ENST00000354547 HNRNPLLQ8WVV9 542 aaKnown RBP21.78■■□□□ 1.08
COL13A1-201ENST00000354547 NUP58Q9BVL2 599 aa21.78■■□□□ 1.08
COL13A1-201ENST00000354547 DEF6Q9H4E7 631 aa21.78■■□□□ 1.08
COL13A1-201ENST00000354547 LRRC4BQ9NT99 713 aa21.78■■□□□ 1.08
COL13A1-201ENST00000354547 SCNN1DP51172 638 aa21.78■■□□□ 1.08
COL13A1-201ENST00000354547 GPS2Q13227 327 aa21.78■■□□□ 1.08
COL13A1-201ENST00000354547 MEA1Q16626 185 aa21.78■■□□□ 1.08
COL13A1-201ENST00000354547 TMEM266Q2M3C6 531 aa21.78■■□□□ 1.08
COL13A1-201ENST00000354547 ANKRD13CQ8N6S4 541 aa21.78■■□□□ 1.08
COL13A1-201ENST00000354547 MAST2Q6P0Q8 1798 aa21.78■■□□□ 1.08
COL13A1-201ENST00000354547 SERPINB2P05120 415 aa21.77■■□□□ 1.08
COL13A1-201ENST00000354547 PLCG2P16885 1265 aa21.77■■□□□ 1.08
COL13A1-201ENST00000354547 KIF5AQ12840 1032 aa21.77■■□□□ 1.08
COL13A1-201ENST00000354547 SPA17Q15506 151 aa21.77■■□□□ 1.08
COL13A1-201ENST00000354547 MAGEF1Q9HAY2 307 aa21.77■■□□□ 1.08
COL13A1-201ENST00000354547 MTMR4Q9NYA4 1195 aa21.77■■□□□ 1.08
COL13A1-201ENST00000354547 FAN1Q9Y2M0 1017 aa21.77■■□□□ 1.08
COL13A1-201ENST00000354547 DAGLAQ9Y4D2 1042 aa21.77■■□□□ 1.08
COL13A1-201ENST00000354547 NAV1Q8NEY1 1877 aa21.77■■□□□ 1.08
COL13A1-201ENST00000354547 ZNF263O14978 683 aa21.77■■□□□ 1.08
COL13A1-201ENST00000354547 ATP2B4P23634 1241 aa21.77■■□□□ 1.08
COL13A1-201ENST00000354547 KCTD1Q719H9 257 aa21.77■■□□□ 1.08
COL13A1-201ENST00000354547 TBC1D16Q8TBP0 767 aa21.77■■□□□ 1.08
COL13A1-201ENST00000354547 NDST4Q9H3R1 872 aa21.77■■□□□ 1.08
COL13A1-201ENST00000354547 KANSL2Q9H9L4 492 aa21.77■■□□□ 1.08
COL13A1-201ENST00000354547 USP21Q9UK80 565 aa21.77■■□□□ 1.08
COL13A1-201ENST00000354547 LRRIQ3A6PVS8 624 aaPredicted RBP21.77■■□□□ 1.07
COL13A1-201ENST00000354547 RGL2O15211 777 aa21.77■■□□□ 1.07
COL13A1-201ENST00000354547 CACNB1Q02641 598 aaPredicted RBP21.77■■□□□ 1.07
COL13A1-201ENST00000354547 RRAGAQ7L523 313 aa21.77■■□□□ 1.07
COL13A1-201ENST00000354547 DDX12PQ92771 950 aa21.77■■□□□ 1.07
COL13A1-201ENST00000354547 MTMR9Q96QG7 549 aa21.77■■□□□ 1.07
COL13A1-201ENST00000354547 MLXIPQ9HAP2 919 aa21.77■■□□□ 1.07
COL13A1-201ENST00000354547 KRT79Q5XKE5 535 aa21.76■■□□□ 1.07
COL13A1-201ENST00000354547 RIOX1Q9H6W3 641 aa21.76■■□□□ 1.07
COL13A1-201ENST00000354547 EDIL3O43854 480 aa21.76■■□□□ 1.07
COL13A1-201ENST00000354547 MATR3P43243 847 aaKnown RBP eCLIP21.76■■□□□ 1.07
COL13A1-201ENST00000354547 VWA3BQ502W6 1294 aa21.76■■□□□ 1.07
COL13A1-201ENST00000354547 ZFP91Q96JP5 570 aaPredicted RBP21.76■■□□□ 1.07
COL13A1-201ENST00000354547 PDE2AO00408 941 aaPredicted RBP21.75■■□□□ 1.07
COL13A1-201ENST00000354547 IL1R1P14778 569 aa21.75■■□□□ 1.07
COL13A1-201ENST00000354547 ECM1Q16610 540 aa21.75■■□□□ 1.07
COL13A1-201ENST00000354547 DDX4Q9NQI0 724 aaKnown RBP21.75■■□□□ 1.07
COL13A1-201ENST00000354547 EIF3CLB5ME19 914 aaKnown RBP21.75■■□□□ 1.07
COL13A1-201ENST00000354547 ZBTB22O15209 634 aa21.75■■□□□ 1.07
COL13A1-201ENST00000354547 AKR1B10O60218 316 aa21.75■■□□□ 1.07
COL13A1-201ENST00000354547 EIF3JO75822 258 aaKnown RBP21.75■■□□□ 1.07
COL13A1-201ENST00000354547 EIF4A3P38919 411 aaKnown RBP21.75■■□□□ 1.07
COL13A1-201ENST00000354547 C2orf54Q08AI8 447 aa21.75■■□□□ 1.07
COL13A1-201ENST00000354547 CENPPQ6IPU0 288 aa21.75■■□□□ 1.07
COL13A1-201ENST00000354547 SECISBP2LQ93073 1101 aaKnown RBP21.75■■□□□ 1.07
COL13A1-201ENST00000354547 RBM17Q96I25 401 aaKnown RBP21.75■■□□□ 1.07
COL13A1-201ENST00000354547 EIF3CQ99613 913 aaKnown RBP21.75■■□□□ 1.07
COL13A1-201ENST00000354547 CXCR5P32302 372 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 ENOX2Q16206 610 aaKnown RBP21.74■■□□□ 1.07
COL13A1-201ENST00000354547 UNC13DQ70J99 1090 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 ADGRF4Q8IZF3 695 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 IFIH1Q9BYX4 1025 aaKnown RBP21.74■■□□□ 1.07
COL13A1-201ENST00000354547 ARHGAP20Q9P2F6 1191 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 SBF2Q86WG5 1849 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 MYH1P12882 1939 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 MOCS3O95396 460 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 USP14P54578 494 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 HSP90B2PQ58FF3 399 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 RETREG2Q8NC44 543 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 NLRC4Q9NPP4 1024 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 CALCOCO1Q9P1Z2 691 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 DOK7Q18PE1 504 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 NELFCDQ8IXH7 590 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 ERGIC2Q96RQ1 377 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 GBP3Q9H0R5 595 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 ZHX3Q9H4I2 956 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 JMJD4Q9H9V9 463 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 SMARCAL1Q9NZC9 954 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 CAPN6Q9Y6Q1 641 aa21.74■■□□□ 1.07
COL13A1-201ENST00000354547 BTAF1O14981 1849 aa21.73■■□□□ 1.07
COL13A1-201ENST00000354547 DDX60LQ5H9U9 1706 aaKnown RBP21.73■■□□□ 1.07
COL13A1-201ENST00000354547 LRRC53A6NM62 1247 aa21.73■■□□□ 1.07
COL13A1-201ENST00000354547 FAM196BA6NMK8 535 aa21.73■■□□□ 1.07
COL13A1-201ENST00000354547 PPP1R11O60927 126 aaPredicted RBP21.73■■□□□ 1.07
COL13A1-201ENST00000354547 DNA2P51530 1060 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms