RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 CDC37Q16543 378 aaPredicted RBP18.6■□□□□ 0.57
PDGFA-201ENST00000354513 OTOP2Q7RTS6 562 aa18.6■□□□□ 0.57
PDGFA-201ENST00000354513 MTG1Q9BT17 334 aaPredicted RBP18.6■□□□□ 0.57
PDGFA-201ENST00000354513 PRDM6Q9NQX0 595 aa18.6■□□□□ 0.57
PDGFA-201ENST00000354513 MYO9BQ13459 2157 aa18.59■□□□□ 0.57
PDGFA-201ENST00000354513 A6NJR5 290 aa18.59■□□□□ 0.57
PDGFA-201ENST00000354513 CPT1AP50416 773 aa18.59■□□□□ 0.57
PDGFA-201ENST00000354513 PPP2R5BQ15173 497 aa18.59■□□□□ 0.57
PDGFA-201ENST00000354513 CCDC62Q6P9F0 684 aa18.59■□□□□ 0.57
PDGFA-201ENST00000354513 ADGRF4Q8IZF3 695 aa18.59■□□□□ 0.57
PDGFA-201ENST00000354513 RGS22Q8NE09 1264 aa18.59■□□□□ 0.57
PDGFA-201ENST00000354513 DSCC1Q9BVC3 393 aa18.59■□□□□ 0.57
PDGFA-201ENST00000354513 NKX2-4Q9H2Z4 354 aa18.59■□□□□ 0.57
PDGFA-201ENST00000354513 PRDM12Q9H4Q4 367 aa18.59■□□□□ 0.57
PDGFA-201ENST00000354513 ZSWIM5Q9P217 1185 aa18.59■□□□□ 0.57
PDGFA-201ENST00000354513 PNMA2Q9UL42 364 aa18.59■□□□□ 0.57
PDGFA-201ENST00000354513 MUC3AQ02505 3323 aa18.59■□□□□ 0.57
PDGFA-201ENST00000354513 OPLAHO14841 1288 aa18.58■□□□□ 0.57
PDGFA-201ENST00000354513 PDE4AP27815 886 aa18.58■□□□□ 0.57
PDGFA-201ENST00000354513 NBPF20Q3BBV1 942 aa18.58■□□□□ 0.57
PDGFA-201ENST00000354513 SYTL5Q8TDW5 730 aaPredicted RBP18.58■□□□□ 0.57
PDGFA-201ENST00000354513 SCFD2Q8WU76 684 aa18.58■□□□□ 0.57
PDGFA-201ENST00000354513 TAAR1Q96RJ0 339 aa18.58■□□□□ 0.57
PDGFA-201ENST00000354513 ZSCAN10Q96SZ4 725 aaPredicted RBP18.58■□□□□ 0.57
PDGFA-201ENST00000354513 DIAPH3Q9NSV4 1193 aa18.58■□□□□ 0.57
PDGFA-201ENST00000354513 ABCB11O95342 1321 aa18.57■□□□□ 0.56
PDGFA-201ENST00000354513 RBAK-RBAKDNI3L0D1 243 aa18.57■□□□□ 0.56
PDGFA-201ENST00000354513 NKRFO15226 690 aaKnown RBP eCLIP18.57■□□□□ 0.56
PDGFA-201ENST00000354513 GSPT1P15170 499 aaKnown RBP18.57■□□□□ 0.56
PDGFA-201ENST00000354513 RABGGTBP53611 331 aa18.57■□□□□ 0.56
PDGFA-201ENST00000354513 TTLL4Q14679 1199 aa18.57■□□□□ 0.56
PDGFA-201ENST00000354513 RAB30Q15771 203 aa18.57■□□□□ 0.56
PDGFA-201ENST00000354513 QRICH1Q2TAL8 776 aa18.57■□□□□ 0.56
PDGFA-201ENST00000354513 ASPRV1Q53RT3 343 aa18.57■□□□□ 0.56
PDGFA-201ENST00000354513 CTAGE1Q96RT6 745 aa18.57■□□□□ 0.56
PDGFA-201ENST00000354513 JMJD4Q9H9V9 463 aa18.57■□□□□ 0.56
PDGFA-201ENST00000354513 CENPBP07199 599 aaPredicted RBP18.56■□□□□ 0.56
PDGFA-201ENST00000354513 TXNP10599 105 aaKnown RBP18.56■□□□□ 0.56
PDGFA-201ENST00000354513 MYOGP15173 224 aa18.56■□□□□ 0.56
PDGFA-201ENST00000354513 NT5C2P49902 561 aa18.56■□□□□ 0.56
PDGFA-201ENST00000354513 ARHGAP1Q07960 439 aa18.56■□□□□ 0.56
PDGFA-201ENST00000354513 SEC23AQ15436 765 aa18.56■□□□□ 0.56
PDGFA-201ENST00000354513 SLC35G1Q2M3R5 365 aa18.56■□□□□ 0.56
PDGFA-201ENST00000354513 IQCA1Q86XH1 822 aa18.56■□□□□ 0.56
PDGFA-201ENST00000354513 STAG2Q8N3U4 1231 aa18.56■□□□□ 0.56
PDGFA-201ENST00000354513 KAT14Q9H8E8 782 aa18.56■□□□□ 0.56
PDGFA-201ENST00000354513 BAZ2BQ9UIF8 2168 aaKnown RBP18.56■□□□□ 0.56
PDGFA-201ENST00000354513 PPP1R11O60927 126 aaPredicted RBP18.55■□□□□ 0.56
PDGFA-201ENST00000354513 NFRKBQ6P4R8 1299 aa18.55■□□□□ 0.56
PDGFA-201ENST00000354513 CYB5R4Q7L1T6 521 aa18.55■□□□□ 0.56
PDGFA-201ENST00000354513 MMP3P08254 477 aa18.54■□□□□ 0.56
PDGFA-201ENST00000354513 CCDC178Q5BJE1 867 aa18.54■□□□□ 0.56
PDGFA-201ENST00000354513 AFG1LQ8WV93 481 aa18.54■□□□□ 0.56
PDGFA-201ENST00000354513 KAT2BQ92831 832 aa18.54■□□□□ 0.56
PDGFA-201ENST00000354513 MTMR8Q96EF0 704 aa18.54■□□□□ 0.56
PDGFA-201ENST00000354513 MAF1Q9H063 256 aa18.54■□□□□ 0.56
PDGFA-201ENST00000354513 MTIF3Q9H2K0 278 aaKnown RBP18.54■□□□□ 0.56
PDGFA-201ENST00000354513 MSRAQ9UJ68 235 aa18.54■□□□□ 0.56
PDGFA-201ENST00000354513 XIRP2A4UGR9 3374 aa18.54■□□□□ 0.56
PDGFA-201ENST00000354513 MICAL3Q7RTP6 2002 aa18.53■□□□□ 0.56
PDGFA-201ENST00000354513 HIP1O00291 1037 aa18.53■□□□□ 0.56
PDGFA-201ENST00000354513 SUPT20HL2P0C7V6 817 aa18.53■□□□□ 0.56
PDGFA-201ENST00000354513 GHRHRQ02643 423 aa18.53■□□□□ 0.56
PDGFA-201ENST00000354513 IMMTQ16891 758 aaKnown RBP18.53■□□□□ 0.56
PDGFA-201ENST00000354513 LY6KQ17RY6 165 aa18.53■□□□□ 0.56
PDGFA-201ENST00000354513 FAM47CQ5HY64 1035 aa18.53■□□□□ 0.56
PDGFA-201ENST00000354513 DEFB128Q7Z7B8 93 aa18.53■□□□□ 0.56
PDGFA-201ENST00000354513 RPUSD2Q8IZ73 545 aaKnown RBP18.53■□□□□ 0.56
PDGFA-201ENST00000354513 GAS2L1Q99501 681 aaPredicted RBP18.53■□□□□ 0.56
PDGFA-201ENST00000354513 MPHOSPH6Q99547 160 aaKnown RBP18.53■□□□□ 0.56
PDGFA-201ENST00000354513 TAF6LQ9Y6J9 622 aa18.53■□□□□ 0.56
PDGFA-201ENST00000354513 SLC4A7Q9Y6M7 1214 aa18.53■□□□□ 0.56
PDGFA-201ENST00000354513 RAD50Q92878 1312 aa18.53■□□□□ 0.56
PDGFA-201ENST00000354513 SIP14410 1827 aa18.53■□□□□ 0.56
PDGFA-201ENST00000354513 PITPNM1O00562 1244 aa18.52■□□□□ 0.56
PDGFA-201ENST00000354513 KPNA6O60684 536 aa18.52■□□□□ 0.56
PDGFA-201ENST00000354513 ARHGEF15O94989 841 aa18.52■□□□□ 0.56
PDGFA-201ENST00000354513 PARP1P09874 1014 aaKnown RBP18.52■□□□□ 0.56
PDGFA-201ENST00000354513 IQCF3P0C7M6 154 aa18.52■□□□□ 0.56
PDGFA-201ENST00000354513 PTPN11Q06124 597 aaPredicted RBP18.52■□□□□ 0.56
PDGFA-201ENST00000354513 GPNMBQ14956 572 aa18.52■□□□□ 0.56
PDGFA-201ENST00000354513 SEPT14Q6ZU15 432 aa18.52■□□□□ 0.56
PDGFA-201ENST00000354513 FBXO11Q86XK2 927 aa18.52■□□□□ 0.56
PDGFA-201ENST00000354513 DHX38Q92620 1227 aaKnown RBP18.52■□□□□ 0.56
PDGFA-201ENST00000354513 GPHNQ9NQX3 736 aaPredicted RBP18.52■□□□□ 0.56
PDGFA-201ENST00000354513 MAD2L2Q9UI95 211 aa18.52■□□□□ 0.56
PDGFA-201ENST00000354513 PCDHA11Q9Y5I1 949 aa18.52■□□□□ 0.56
PDGFA-201ENST00000354513 TCF20Q9UGU0 1960 aaKnown RBP18.52■□□□□ 0.56
PDGFA-201ENST00000354513 ZBBXA8MT70 800 aa18.51■□□□□ 0.55
PDGFA-201ENST00000354513 PFKMP08237 780 aa18.51■□□□□ 0.55
PDGFA-201ENST00000354513 EIF2AK2P19525 551 aaKnown RBP18.51■□□□□ 0.55
PDGFA-201ENST00000354513 HSD17B4P51659 736 aa18.51■□□□□ 0.55
PDGFA-201ENST00000354513 TTC22Q5TAA0 569 aa18.51■□□□□ 0.55
PDGFA-201ENST00000354513 GDF6Q6KF10 455 aaPredicted RBP18.51■□□□□ 0.55
PDGFA-201ENST00000354513 NSUN6Q8TEA1 469 aaKnown RBP18.51■□□□□ 0.55
PDGFA-201ENST00000354513 PPM1EQ8WY54 764 aa18.51■□□□□ 0.55
PDGFA-201ENST00000354513 RMDN3Q96TC7 470 aa18.51■□□□□ 0.55
PDGFA-201ENST00000354513 KRT23Q9C075 422 aa18.51■□□□□ 0.55
PDGFA-201ENST00000354513 SLC28A3Q9HAS3 691 aa18.51■□□□□ 0.55
PDGFA-201ENST00000354513 SENP2Q9HC62 589 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms