RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 ZRSR1Q15695 479 aaKnown RBP23.21■■□□□ 1.31
TRIM4-202ENST00000354241 STX1AQ16623 288 aa23.21■■□□□ 1.31
TRIM4-202ENST00000354241 MUM1L1Q5H9M0 696 aa23.21■■□□□ 1.31
TRIM4-202ENST00000354241 KANK3Q6NY19 840 aa23.21■■□□□ 1.31
TRIM4-202ENST00000354241 CEP57L1Q8IYX8 460 aa23.21■■□□□ 1.31
TRIM4-202ENST00000354241 RASSF8Q8NHQ8 419 aa23.21■■□□□ 1.31
TRIM4-202ENST00000354241 HOXC10Q9NYD6 342 aa23.21■■□□□ 1.31
TRIM4-202ENST00000354241 A0A0G2JLL6 359 aaPredicted RBP23.21■■□□□ 1.31
TRIM4-202ENST00000354241 CXCL11O14625 94 aa23.21■■□□□ 1.31
TRIM4-202ENST00000354241 HSD17B4P51659 736 aa23.21■■□□□ 1.31
TRIM4-202ENST00000354241 PRRT2Q7Z6L0 340 aaPredicted RBP23.21■■□□□ 1.31
TRIM4-202ENST00000354241 REPS2Q8NFH8 660 aa23.21■■□□□ 1.31
TRIM4-202ENST00000354241 TRERF1Q96PN7 1200 aa23.21■■□□□ 1.31
TRIM4-202ENST00000354241 PYM1Q9BRP8 204 aaKnown RBP23.21■■□□□ 1.31
TRIM4-202ENST00000354241 ADAMTS5Q9UNA0 930 aa23.21■■□□□ 1.31
TRIM4-202ENST00000354241 A0A087WWV3 80 aa23.2■■□□□ 1.3
TRIM4-202ENST00000354241 SPDYE16A6NNV3 312 aaPredicted RBP23.2■■□□□ 1.3
TRIM4-202ENST00000354241 ZNF76P36508 570 aa23.2■■□□□ 1.3
TRIM4-202ENST00000354241 KARSQ15046 597 aaKnown RBP23.2■■□□□ 1.3
TRIM4-202ENST00000354241 ELOA2Q8IYF1 753 aaPredicted RBP23.2■■□□□ 1.3
TRIM4-202ENST00000354241 GRAMD1CQ8IYS0 662 aa23.2■■□□□ 1.3
TRIM4-202ENST00000354241 IQUBQ8NA54 791 aa23.2■■□□□ 1.3
TRIM4-202ENST00000354241 CCDC34Q96HJ3 373 aa23.2■■□□□ 1.3
TRIM4-202ENST00000354241 MBOAT7Q96N66 472 aa23.2■■□□□ 1.3
TRIM4-202ENST00000354241 USP25Q9UHP3 1055 aa23.2■■□□□ 1.3
TRIM4-202ENST00000354241 MYPNQ86TC9 1320 aa23.2■■□□□ 1.3
TRIM4-202ENST00000354241 SLFN14P0C7P3 912 aa23.2■■□□□ 1.3
TRIM4-202ENST00000354241 FXR2P51116 673 aaKnown RBP eCLIP23.2■■□□□ 1.3
TRIM4-202ENST00000354241 UBXN2AP68543 259 aa23.2■■□□□ 1.3
TRIM4-202ENST00000354241 POSTNQ15063 836 aa23.2■■□□□ 1.3
TRIM4-202ENST00000354241 PRR16Q569H4 304 aa23.2■■□□□ 1.3
TRIM4-202ENST00000354241 LDLRAD1Q5T700 205 aa23.2■■□□□ 1.3
TRIM4-202ENST00000354241 SNRNP48Q6IEG0 339 aaKnown RBP23.2■■□□□ 1.3
TRIM4-202ENST00000354241 PROCA1Q8NCQ7 364 aaPredicted RBP23.2■■□□□ 1.3
TRIM4-202ENST00000354241 ZNF526Q8TF50 670 aaPredicted RBP23.2■■□□□ 1.3
TRIM4-202ENST00000354241 HAS1Q92839 578 aa23.2■■□□□ 1.3
TRIM4-202ENST00000354241 DNAJC25Q9H1X3 360 aa23.2■■□□□ 1.3
TRIM4-202ENST00000354241 BIN1O00499 593 aa23.19■■□□□ 1.3
TRIM4-202ENST00000354241 CYP3A4P08684 503 aa23.19■■□□□ 1.3
TRIM4-202ENST00000354241 OAZ1P54368 228 aa23.19■■□□□ 1.3
TRIM4-202ENST00000354241 MDM2Q00987 491 aaPredicted RBP23.19■■□□□ 1.3
TRIM4-202ENST00000354241 TMEM132BQ14DG7 1078 aa23.19■■□□□ 1.3
TRIM4-202ENST00000354241 CABP7Q86V35 215 aa23.19■■□□□ 1.3
TRIM4-202ENST00000354241 IGSF22Q8N9C0 903 aa23.19■■□□□ 1.3
TRIM4-202ENST00000354241 GJA10Q969M2 543 aa23.19■■□□□ 1.3
TRIM4-202ENST00000354241 UIMC1Q96RL1 719 aa23.19■■□□□ 1.3
TRIM4-202ENST00000354241 RAB34Q9BZG1 259 aa23.19■■□□□ 1.3
TRIM4-202ENST00000354241 CCSER1Q9C0I3 900 aa23.19■■□□□ 1.3
TRIM4-202ENST00000354241 TTC12Q9H892 705 aaPredicted RBP23.19■■□□□ 1.3
TRIM4-202ENST00000354241 ANO10Q9NW15 660 aa23.19■■□□□ 1.3
TRIM4-202ENST00000354241 KCNH4Q9UQ05 1017 aa23.19■■□□□ 1.3
TRIM4-202ENST00000354241 PRR29P0C7W0 189 aa23.18■■□□□ 1.3
TRIM4-202ENST00000354241 E2F4Q16254 413 aa23.18■■□□□ 1.3
TRIM4-202ENST00000354241 Q4G0T1 1027 aa23.18■■□□□ 1.3
TRIM4-202ENST00000354241 NMRK2Q9NPI5 230 aa23.18■■□□□ 1.3
TRIM4-202ENST00000354241 DISC1Q9NRI5 854 aa23.18■■□□□ 1.3
TRIM4-202ENST00000354241 RNF146Q9NTX7 359 aa23.18■■□□□ 1.3
TRIM4-202ENST00000354241 LRWD1Q9UFC0 647 aa23.18■■□□□ 1.3
TRIM4-202ENST00000354241 CCDC39Q9UFE4 941 aa23.18■■□□□ 1.3
TRIM4-202ENST00000354241 ZNF214Q9UL59 606 aaPredicted RBP23.18■■□□□ 1.3
TRIM4-202ENST00000354241 RIPK3Q9Y572 518 aa23.18■■□□□ 1.3
TRIM4-202ENST00000354241 FAM86B1E9PN63 330 aa23.18■■□□□ 1.3
TRIM4-202ENST00000354241 FAM86B2P0C5J1 330 aa23.18■■□□□ 1.3
TRIM4-202ENST00000354241 CIITAP33076 1130 aa23.18■■□□□ 1.3
TRIM4-202ENST00000354241 STAT6P42226 847 aa23.18■■□□□ 1.3
TRIM4-202ENST00000354241 AFMP43652 599 aa23.18■■□□□ 1.3
TRIM4-202ENST00000354241 PLS1Q14651 629 aa23.18■■□□□ 1.3
TRIM4-202ENST00000354241 FAM200AQ8TCP9 573 aa23.18■■□□□ 1.3
TRIM4-202ENST00000354241 SLC10A4Q96EP9 437 aa23.18■■□□□ 1.3
TRIM4-202ENST00000354241 KCNMB3Q9NPA1 279 aa23.18■■□□□ 1.3
TRIM4-202ENST00000354241 COL20A1Q9P218 1284 aa23.18■■□□□ 1.3
TRIM4-202ENST00000354241 GHRHRQ02643 423 aa23.17■■□□□ 1.3
TRIM4-202ENST00000354241 RRAGBQ5VZM2 374 aa23.17■■□□□ 1.3
TRIM4-202ENST00000354241 PAGE5Q96GU1 130 aa23.17■■□□□ 1.3
TRIM4-202ENST00000354241 PLIN2Q99541 437 aa23.17■■□□□ 1.3
TRIM4-202ENST00000354241 TUBE1Q9UJT0 475 aa23.17■■□□□ 1.3
TRIM4-202ENST00000354241 POTEMA6NI47 508 aa23.16■■□□□ 1.3
TRIM4-202ENST00000354241 ISM2Q6H9L7 571 aa23.16■■□□□ 1.3
TRIM4-202ENST00000354241 NSMFQ6X4W1 530 aa23.16■■□□□ 1.3
TRIM4-202ENST00000354241 C11orf57Q6ZUT1 292 aaPredicted RBP23.16■■□□□ 1.3
TRIM4-202ENST00000354241 TEX13BQ9BXU2 312 aa23.16■■□□□ 1.3
TRIM4-202ENST00000354241 PCDHA12Q9UN75 941 aa23.16■■□□□ 1.3
TRIM4-202ENST00000354241 PCDHA5Q9Y5H7 936 aa23.16■■□□□ 1.3
TRIM4-202ENST00000354241 HOXA7P31268 230 aaPredicted RBP23.16■■□□□ 1.3
TRIM4-202ENST00000354241 IRX3P78415 501 aaPredicted RBP23.16■■□□□ 1.3
TRIM4-202ENST00000354241 PDIA5Q14554 519 aa23.16■■□□□ 1.3
TRIM4-202ENST00000354241 PDXDC2PQ6P474 469 aa23.16■■□□□ 1.3
TRIM4-202ENST00000354241 SLFN12Q8IYM2 578 aa23.16■■□□□ 1.3
TRIM4-202ENST00000354241 SAMD3Q8N6K7 520 aa23.16■■□□□ 1.3
TRIM4-202ENST00000354241 SYTL5Q8TDW5 730 aaPredicted RBP23.16■■□□□ 1.3
TRIM4-202ENST00000354241 LENG9Q96B70 501 aa23.16■■□□□ 1.3
TRIM4-202ENST00000354241 MAP3K20Q9NYL2 800 aaKnown RBP23.16■■□□□ 1.3
TRIM4-202ENST00000354241 ATP2A1O14983 1001 aa23.15■■□□□ 1.3
TRIM4-202ENST00000354241 NLRP12P59046 1061 aa23.15■■□□□ 1.3
TRIM4-202ENST00000354241 RPS6P62753 249 aaKnown RBP23.15■■□□□ 1.3
TRIM4-202ENST00000354241 SLC30A10Q6XR72 485 aa23.15■■□□□ 1.3
TRIM4-202ENST00000354241 RNF207Q6ZRF8 634 aa23.15■■□□□ 1.3
TRIM4-202ENST00000354241 SH3RF1Q7Z6J0 888 aa23.15■■□□□ 1.3
TRIM4-202ENST00000354241 CYP2W1Q8TAV3 490 aa23.15■■□□□ 1.3
TRIM4-202ENST00000354241 SMARCE1Q969G3 411 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms