RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 ADORA1P30542 326 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 PHBP35232 272 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 CHRNDQ07001 517 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 TRMT10CQ7L0Y3 403 aaKnown RBP10.89□□□□□ -0.67
COL11A1-201ENST00000353414 NR1H4Q96RI1 486 aaPredicted RBP10.89□□□□□ -0.67
COL11A1-201ENST00000353414 PIDD1Q9HB75 910 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 ITSN2Q9NZM3 1697 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 MAFGO15525 162 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 CXCR5P32302 372 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 RASSF7Q02833 373 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 RPGRIP1Q96KN7 1286 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 ZWILCHQ9H900 591 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 SFI1A8K8P3 1242 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 NEMP1O14524 444 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 ATF2P15336 505 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 PTPREP23469 700 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 KCTD6Q8NC69 237 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 THOC1Q96FV9 657 aaKnown RBP10.88□□□□□ -0.67
COL11A1-201ENST00000353414 HEXIM2Q96MH2 286 aaKnown RBP10.88□□□□□ -0.67
COL11A1-201ENST00000353414 NUP58Q9BVL2 599 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 MYL1P05976 194 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 ANXA13P27216 316 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 BLIDQ8IZY5 108 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 PNMA1Q8ND90 353 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 PPWD1Q96BP3 646 aaKnown RBP10.88□□□□□ -0.67
COL11A1-201ENST00000353414 NRBP2Q9NSY0 501 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 A0A087WWV3 80 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 LMNB1P20700 586 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 IFNAR2P48551 515 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 PDE1BQ01064 536 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 TBCCQ15814 346 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 UBE2SQ16763 222 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 DSTYKQ6XUX3 929 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 OTULINQ96BN8 352 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 COA7Q96BR5 231 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 SLC10A4Q96EP9 437 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 KMT5AQ9NQR1 393 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 A0A1B0GUA9 196 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 CACNB3P54284 484 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 ODR4Q5SWX8 454 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 CALN1Q9BXU9 219 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 TROVE2P10155 538 aaKnown RBP eCLIP10.88□□□□□ -0.67
COL11A1-201ENST00000353414 YWHAHQ04917 246 aaPredicted RBP10.88□□□□□ -0.67
COL11A1-201ENST00000353414 IFNLR1Q8IU57 520 aaPredicted RBP10.88□□□□□ -0.67
COL11A1-201ENST00000353414 CABS1Q96KC9 395 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 GDAQ9Y2T3 454 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 PCDHA1Q9Y5I3 950 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 ERBB3P21860 1342 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 ARHGEF6Q15052 776 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 KCTD16Q68DU8 428 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 MIS18BP1Q6P0N0 1132 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 SCN4BQ8IWT1 228 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 CFAP61Q8NHU2 1237 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 AFG1LQ8WV93 481 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 RAD50Q92878 1312 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 GBP5Q96PP8 586 aa10.88□□□□□ -0.67
COL11A1-201ENST00000353414 PFDN6O15212 129 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 TRPA1O75762 1119 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 RNF8O76064 485 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 APOEP02649 317 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 ADAM9Q13443 819 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 ZNF394Q53GI3 561 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 SDCCAG3Q96C92 435 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 IL16Q14005 1332 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 ADD1P35611 737 aaKnown RBP10.87□□□□□ -0.67
COL11A1-201ENST00000353414 ZNF449Q6P9G9 518 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 COG4Q9H9E3 785 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 POLD4Q9HCU8 107 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 FBXL5Q9UKA1 691 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 IBTKQ9P2D0 1353 aaPredicted RBP10.87□□□□□ -0.67
COL11A1-201ENST00000353414 TOM1L1O75674 476 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 ZBTB7AO95365 584 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 STMN1P16949 149 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 TRIM14Q14142 442 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 B4GALNT4Q76KP1 1039 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 CERS3Q8IU89 383 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 ZKSCAN5Q9Y2L8 839 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 SBNO1A3KN83 1393 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 KDM3AQ9Y4C1 1321 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 N4BP1O75113 896 aaKnown RBP10.87□□□□□ -0.67
COL11A1-201ENST00000353414 THOC5Q13769 683 aaKnown RBP10.87□□□□□ -0.67
COL11A1-201ENST00000353414 ERFEQ4G0M1 354 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 ADALQ6DHV7 355 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 RNF139Q8WU17 664 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 GREM2Q9H772 168 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 CCND2P30279 289 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 HADHAP40939 763 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 CYP4F22Q6NT55 531 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 DARS2Q6PI48 645 aaKnown RBP10.87□□□□□ -0.67
COL11A1-201ENST00000353414 RAB44Q7Z6P3 723 aaPredicted RBP10.87□□□□□ -0.67
COL11A1-201ENST00000353414 MCF2L2Q86YR7 1114 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 IFNL3Q8IZI9 196 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 DCTPP1Q9H773 170 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 ZFYVE16Q7Z3T8 1539 aa10.87□□□□□ -0.67
COL11A1-201ENST00000353414 OCM2P0CE71 109 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 OCMP0CE72 109 aaPredicted RBP10.86□□□□□ -0.67
COL11A1-201ENST00000353414 PMLP29590 882 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 FAM196AQ6ZSG2 479 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 TTC25Q96NG3 672 aa10.86□□□□□ -0.67
COL11A1-201ENST00000353414 ENC1O14682 589 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms