RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 CHRNDQ07001 517 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 KCNB1Q14721 858 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 ZKSCAN8Q15776 578 aaPredicted RBP16.54■□□□□ 0.24
TRAF3-202ENST00000351691 KCTD16Q68DU8 428 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 RCSD1Q6JBY9 416 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 FAM228AQ86W67 206 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 TRIM6Q9C030 488 aaPredicted RBP16.54■□□□□ 0.24
TRAF3-202ENST00000351691 BATF3Q9NR55 127 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 DUSP10Q9Y6W6 482 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 LOC102724428A0A0B4J2F2 783 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 GMNCA6NCL1 334 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 PJA2O43164 708 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 PRKAB2O43741 272 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 DNAJC8O75937 253 aaPredicted RBP16.54■□□□□ 0.24
TRAF3-202ENST00000351691 SIK1P57059 783 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 PPARAQ07869 468 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 UBE4AQ14139 1066 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 PPP2R5AQ15172 486 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 ANKRD20A8PQ5CZ79 823 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 TMBIM4Q9HC24 238 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 INCENPQ9NQS7 918 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 LRWD1Q9UFC0 647 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 NIP7Q9Y221 180 aaKnown RBP eCLIP16.54■□□□□ 0.24
TRAF3-202ENST00000351691 ZNF831Q5JPB2 1677 aa16.54■□□□□ 0.24
TRAF3-202ENST00000351691 RASSF10A6NK89 507 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 E7EVH7 732 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 MGRN1O60291 552 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 COBLO75128 1261 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 MYL1P05976 194 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 CYP7A1P22680 504 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 HSPA9P38646 679 aaKnown RBP16.53■□□□□ 0.24
TRAF3-202ENST00000351691 CLEC4GQ6UXB4 293 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 ZNF654Q8IZM8 581 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 FANCBQ8NB91 859 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 ESR2Q92731 530 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 CCDC42Q96M95 316 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 MTRQ99707 1265 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 BLZF1Q9H2G9 400 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 PLCB1Q9NQ66 1216 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 TPX2Q9ULW0 747 aaKnown RBP16.53■□□□□ 0.24
TRAF3-202ENST00000351691 PCDHA13Q9Y5I0 950 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 GRID2IPA4D2P6 1211 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 PAEPP09466 180 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 TRIM21P19474 475 aaKnown RBP16.53■□□□□ 0.24
TRAF3-202ENST00000351691 SEC24CP53992 1094 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 CLNS1AP54105 237 aaKnown RBP16.53■□□□□ 0.24
TRAF3-202ENST00000351691 VPS72Q15906 364 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 CCDC96Q2M329 555 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 CFAP221Q4G0U5 840 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 TMED8Q6PL24 325 aaPredicted RBP16.53■□□□□ 0.24
TRAF3-202ENST00000351691 BARGINQ6ZT62 677 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 HOOK2Q96ED9 719 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 ERGIC2Q96RQ1 377 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 UBAC1Q9BSL1 405 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 CENPHQ9H3R5 247 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 AGPAT5Q9NUQ2 364 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 CAPN6Q9Y6Q1 641 aa16.53■□□□□ 0.24
TRAF3-202ENST00000351691 MAGEB6P1A0A0J9YX57 407 aa16.52■□□□□ 0.24
TRAF3-202ENST00000351691 ZNF263O14978 683 aa16.52■□□□□ 0.24
TRAF3-202ENST00000351691 TRAPPC3O43617 180 aa16.52■□□□□ 0.24
TRAF3-202ENST00000351691 RRP12Q5JTH9 1297 aaKnown RBP16.52■□□□□ 0.24
TRAF3-202ENST00000351691 RNF10Q8N5U6 811 aaKnown RBP16.52■□□□□ 0.24
TRAF3-202ENST00000351691 KDM4CQ9H3R0 1056 aa16.52■□□□□ 0.24
TRAF3-202ENST00000351691 BCCIPQ9P287 314 aaKnown RBP eCLIP16.52■□□□□ 0.24
TRAF3-202ENST00000351691 THSD7AQ9UPZ6 1657 aa16.52■□□□□ 0.23
TRAF3-202ENST00000351691 A0A1B0GUL6 1792 aa16.52■□□□□ 0.23
TRAF3-202ENST00000351691 TRAPPC10P48553 1259 aa16.51■□□□□ 0.23
TRAF3-202ENST00000351691 BIRC3Q13489 604 aa16.51■□□□□ 0.23
TRAF3-202ENST00000351691 SF3B3Q15393 1217 aaKnown RBP16.51■□□□□ 0.23
TRAF3-202ENST00000351691 SEC23AQ15436 765 aa16.51■□□□□ 0.23
TRAF3-202ENST00000351691 TTC38Q5R3I4 469 aa16.51■□□□□ 0.23
TRAF3-202ENST00000351691 FAM114A1Q8IWE2 563 aa16.51■□□□□ 0.23
TRAF3-202ENST00000351691 TNFRSF25Q93038 417 aa16.51■□□□□ 0.23
TRAF3-202ENST00000351691 IFIH1Q9BYX4 1025 aaKnown RBP16.51■□□□□ 0.23
TRAF3-202ENST00000351691 OSBPL7Q9BZF2 842 aa16.51■□□□□ 0.23
TRAF3-202ENST00000351691 AFF2P51816 1311 aa16.51■□□□□ 0.23
TRAF3-202ENST00000351691 GOLGA6L10A6NI86 522 aa16.51■□□□□ 0.23
TRAF3-202ENST00000351691 NEBLO76041 1014 aa16.51■□□□□ 0.23
TRAF3-202ENST00000351691 PDHBP11177 359 aa16.51■□□□□ 0.23
TRAF3-202ENST00000351691 PAX7P23759 505 aa16.51■□□□□ 0.23
TRAF3-202ENST00000351691 GRIK3Q13003 919 aa16.51■□□□□ 0.23
TRAF3-202ENST00000351691 CDC37Q16543 378 aaPredicted RBP16.51■□□□□ 0.23
TRAF3-202ENST00000351691 NFRKBQ6P4R8 1299 aa16.51■□□□□ 0.23
TRAF3-202ENST00000351691 CEP57Q86XR8 500 aa16.51■□□□□ 0.23
TRAF3-202ENST00000351691 DHTKD1Q96HY7 919 aaPredicted RBP16.51■□□□□ 0.23
TRAF3-202ENST00000351691 TUBGCP2Q9BSJ2 902 aa16.51■□□□□ 0.23
TRAF3-202ENST00000351691 BRIP1Q9BX63 1249 aa16.51■□□□□ 0.23
TRAF3-202ENST00000351691 RBM12Q9NTZ6 932 aaKnown RBP16.51■□□□□ 0.23
TRAF3-202ENST00000351691 PLAGL2Q9UPG8 496 aa16.51■□□□□ 0.23
TRAF3-202ENST00000351691 GDAQ9Y2T3 454 aa16.51■□□□□ 0.23
TRAF3-202ENST00000351691 SNAP23O00161 211 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 DNM1LO00429 736 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 PSMA7O14818 248 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 CARSP49589 748 aaKnown RBP16.5■□□□□ 0.23
TRAF3-202ENST00000351691 CYP27A1Q02318 531 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 ITPK1Q13572 414 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 CRELD2Q6UXH1 353 aaPredicted RBP16.5■□□□□ 0.23
TRAF3-202ENST00000351691 EGFL6Q8IUX8 553 aa16.5■□□□□ 0.23
TRAF3-202ENST00000351691 ZSCAN29Q8IWY8 852 aaPredicted RBP16.5■□□□□ 0.23
TRAF3-202ENST00000351691 STAMQ92783 540 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms