RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 FAM114A1Q8IWE2 563 aa11.73□□□□□ -0.53
CAPN3-203ENST00000349748 TAB2Q9NYJ8 693 aa11.73□□□□□ -0.53
CAPN3-203ENST00000349748 TRIM33Q9UPN9 1127 aa11.73□□□□□ -0.53
CAPN3-203ENST00000349748 SYNRGQ9UMZ2 1314 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 KRT86O43790 486 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 UBOX5O94941 541 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 HEXIM1O94992 359 aaKnown RBP11.72□□□□□ -0.53
CAPN3-203ENST00000349748 VIMP08670 466 aaKnown RBP11.72□□□□□ -0.53
CAPN3-203ENST00000349748 PPP2R2AP63151 447 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 HDGFL1Q5TGJ6 251 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 CCDC155Q8N6L0 562 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 UCMAQ8WVF2 138 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 CHMP6Q96FZ7 201 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 MS4A14Q96JA4 679 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 NOVA2Q9UNW9 492 aaKnown RBP11.72□□□□□ -0.53
CAPN3-203ENST00000349748 OVOS2A0A0G2JMS6 1433 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 PDLIM1O00151 329 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 IFIT3O14879 490 aaKnown RBP11.72□□□□□ -0.53
CAPN3-203ENST00000349748 NCK2O43639 380 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 ZPR1O75312 459 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 SASH1O94885 1247 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 ANXA1P04083 346 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 LBRQ14739 615 aaKnown RBP11.72□□□□□ -0.53
CAPN3-203ENST00000349748 IFT20Q8IY31 132 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 ANKS4BQ8N8V4 417 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 LINS1Q8NG48 757 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 ECT2Q9H8V3 914 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 ATXN10Q9UBB4 475 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 CAPN6Q9Y6Q1 641 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 CACNA1FO60840 1977 aa11.72□□□□□ -0.53
CAPN3-203ENST00000349748 KIF1AQ12756 1690 aa11.71□□□□□ -0.53
CAPN3-203ENST00000349748 TTC26A0AVF1 554 aa11.71□□□□□ -0.53
CAPN3-203ENST00000349748 RARAP10276 462 aa11.71□□□□□ -0.53
CAPN3-203ENST00000349748 SARSP49591 514 aaKnown RBP11.71□□□□□ -0.53
CAPN3-203ENST00000349748 CCNG1P51959 295 aa11.71□□□□□ -0.53
CAPN3-203ENST00000349748 MAGOHP61326 146 aaKnown RBP11.71□□□□□ -0.53
CAPN3-203ENST00000349748 KRT31Q15323 416 aa11.71□□□□□ -0.53
CAPN3-203ENST00000349748 IFI16Q16666 785 aaKnown RBP11.71□□□□□ -0.53
CAPN3-203ENST00000349748 TTC39AQ5SRH9 613 aa11.71□□□□□ -0.53
CAPN3-203ENST00000349748 CDKAL1Q5VV42 579 aa11.71□□□□□ -0.53
CAPN3-203ENST00000349748 MIGA2Q7L4E1 593 aa11.71□□□□□ -0.53
CAPN3-203ENST00000349748 TRPM8Q7Z2W7 1104 aa11.71□□□□□ -0.53
CAPN3-203ENST00000349748 MAGOHBQ96A72 148 aaKnown RBP11.71□□□□□ -0.53
CAPN3-203ENST00000349748 MYH8P13535 1937 aa11.71□□□□□ -0.53
CAPN3-203ENST00000349748 ANO9A1A5B4 782 aa11.71□□□□□ -0.54
CAPN3-203ENST00000349748 SHBGP04278 402 aa11.71□□□□□ -0.54
CAPN3-203ENST00000349748 DESP17661 470 aa11.71□□□□□ -0.54
CAPN3-203ENST00000349748 CYP11B2P19099 503 aa11.71□□□□□ -0.54
CAPN3-203ENST00000349748 KLC1Q07866 573 aa11.71□□□□□ -0.54
CAPN3-203ENST00000349748 SGSM1Q2NKQ1 1148 aa11.71□□□□□ -0.54
CAPN3-203ENST00000349748 OR52E8Q6IFG1 317 aa11.71□□□□□ -0.54
CAPN3-203ENST00000349748 DDX46Q7L014 1031 aaKnown RBP11.71□□□□□ -0.54
CAPN3-203ENST00000349748 CASKIN2Q8WXE0 1202 aa11.71□□□□□ -0.54
CAPN3-203ENST00000349748 MKL1Q969V6 931 aa11.71□□□□□ -0.54
CAPN3-203ENST00000349748 ELAC2Q9BQ52 826 aaKnown RBP11.71□□□□□ -0.54
CAPN3-203ENST00000349748 MOV10L1Q9BXT6 1211 aaKnown RBP11.71□□□□□ -0.54
CAPN3-203ENST00000349748 PPP1R12CQ9BZL4 782 aa11.71□□□□□ -0.54
CAPN3-203ENST00000349748 TRIM7Q9C029 511 aa11.71□□□□□ -0.54
CAPN3-203ENST00000349748 LRRC4CQ9HCJ2 640 aa11.71□□□□□ -0.54
CAPN3-203ENST00000349748 PXDNLA1KZ92 1463 aa11.71□□□□□ -0.54
CAPN3-203ENST00000349748 CTNND1O60716 968 aaKnown RBP11.7□□□□□ -0.54
CAPN3-203ENST00000349748 FAM200BP0CF97 657 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 RPL13P26373 211 aaKnown RBP11.7□□□□□ -0.54
CAPN3-203ENST00000349748 DNA2P51530 1060 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 TAF7Q15545 349 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-203ENST00000349748 DPY19L2Q6NUT2 758 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 WDR59Q6PJI9 974 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 TOM1L2Q6ZVM7 507 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 RUBCNQ92622 972 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 KLHL29Q96CT2 875 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 CTAGE1Q96RT6 745 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 MTFR1LQ9H019 292 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 MLXIPQ9HAP2 919 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 ITIH6Q6UXX5 1313 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 JCADQ9P266 1359 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 FAM237AA0A1B0GTK4 181 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 HGSO14964 777 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-203ENST00000349748 PFDN1O60925 122 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 PPP6R2O75170 966 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 ERCC5P28715 1186 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-203ENST00000349748 TNFRSF8P28908 595 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 MSH2P43246 934 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 USP46P62068 366 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 EXOSC10Q01780 885 aaKnown RBP11.7□□□□□ -0.54
CAPN3-203ENST00000349748 ZNF844Q08AG5 666 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 FNBP4Q8N3X1 1017 aaPredicted RBP11.7□□□□□ -0.54
CAPN3-203ENST00000349748 GDF3Q9NR23 364 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 LRRC42Q9Y546 428 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 GSTT1P30711 240 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 HSD17B3P37058 310 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 GJA8P48165 433 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 ATP11AP98196 1134 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 DEUP1Q05D60 604 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 LCA5Q86VQ0 697 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 VPS37DQ86XT2 251 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 MREGQ8N565 214 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 NBPF15Q8N660 670 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 IFT43Q96FT9 208 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 INCENPQ9NQS7 918 aa11.7□□□□□ -0.54
CAPN3-203ENST00000349748 BTG4Q9NY30 223 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms