RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 RANBP17Q9H2T7 1088 aaKnown RBP15.13■□□□□ 0.01
UBA3-201ENST00000349511 A0A087X0B3 334 aa15.13■□□□□ 0.01
UBA3-201ENST00000349511 FOXN1O15353 648 aa15.13■□□□□ 0.01
UBA3-201ENST00000349511 BMP15O95972 392 aa15.13■□□□□ 0.01
UBA3-201ENST00000349511 CFBP00751 764 aa15.13■□□□□ 0.01
UBA3-201ENST00000349511 TPM4P67936 248 aa15.13■□□□□ 0.01
UBA3-201ENST00000349511 ISM2Q6H9L7 571 aa15.13■□□□□ 0.01
UBA3-201ENST00000349511 FAM160B2Q86V87 743 aa15.13■□□□□ 0.01
UBA3-201ENST00000349511 LPAR1Q92633 364 aa15.13■□□□□ 0.01
UBA3-201ENST00000349511 GJA10Q969M2 543 aa15.13■□□□□ 0.01
UBA3-201ENST00000349511 CDCA5Q96FF9 252 aa15.13■□□□□ 0.01
UBA3-201ENST00000349511 WNK4Q96J92 1243 aa15.13■□□□□ 0.01
UBA3-201ENST00000349511 AS3MTQ9HBK9 375 aa15.13■□□□□ 0.01
UBA3-201ENST00000349511 GINM1Q9NU53 330 aa15.13■□□□□ 0.01
UBA3-201ENST00000349511 MYH7BA7E2Y1 1941 aa15.13■□□□□ 0.01
UBA3-201ENST00000349511 PP2D1A8MPX8 630 aa15.12■□□□□ 0.01
UBA3-201ENST00000349511 SLC37A4O43826 429 aa15.12■□□□□ 0.01
UBA3-201ENST00000349511 MAP3K9P80192 1104 aa15.12■□□□□ 0.01
UBA3-201ENST00000349511 ARMCX5Q6P1M9 558 aa15.12■□□□□ 0.01
UBA3-201ENST00000349511 FCHSD1Q86WN1 690 aa15.12■□□□□ 0.01
UBA3-201ENST00000349511 PRPF38AQ8NAV1 312 aaKnown RBP15.12■□□□□ 0.01
UBA3-201ENST00000349511 FERMT2Q96AC1 680 aa15.12■□□□□ 0.01
UBA3-201ENST00000349511 CLMNQ96JQ2 1002 aa15.12■□□□□ 0.01
UBA3-201ENST00000349511 SLF1Q9BQI6 1058 aa15.12■□□□□ 0.01
UBA3-201ENST00000349511 WDR18Q9BV38 432 aa15.12■□□□□ 0.01
UBA3-201ENST00000349511 CGNQ9P2M7 1197 aaKnown RBP15.12■□□□□ 0.01
UBA3-201ENST00000349511 SNCAIPQ9Y6H5 919 aa15.12■□□□□ 0.01
UBA3-201ENST00000349511 USP14P54578 494 aa15.11■□□□□ 0.01
UBA3-201ENST00000349511 DMTNQ08495 405 aa15.11■□□□□ 0.01
UBA3-201ENST00000349511 MAP1SQ66K74 1059 aaPredicted RBP15.11■□□□□ 0.01
UBA3-201ENST00000349511 LDHDQ86WU2 507 aa15.11■□□□□ 0.01
UBA3-201ENST00000349511 GRAMD1CQ8IYS0 662 aa15.11■□□□□ 0.01
UBA3-201ENST00000349511 ZNF579Q8NAF0 562 aaKnown RBP15.11■□□□□ 0.01
UBA3-201ENST00000349511 CCDC150Q8NCX0 1101 aa15.11■□□□□ 0.01
UBA3-201ENST00000349511 CNNM3Q8NE01 707 aa15.11■□□□□ 0.01
UBA3-201ENST00000349511 TIGD1Q96MW7 591 aa15.11■□□□□ 0.01
UBA3-201ENST00000349511 ANO3Q9BYT9 981 aa15.11■□□□□ 0.01
UBA3-201ENST00000349511 ZNF408Q9H9D4 720 aa15.11■□□□□ 0.01
UBA3-201ENST00000349511 ELP3Q9H9T3 547 aa15.11■□□□□ 0.01
UBA3-201ENST00000349511 RAVER2Q9HCJ3 691 aaKnown RBP15.11■□□□□ 0.01
UBA3-201ENST00000349511 HOMER2Q9NSB8 354 aa15.11■□□□□ 0.01
UBA3-201ENST00000349511 SERTAD1Q9UHV2 236 aa15.11■□□□□ 0.01
UBA3-201ENST00000349511 PNOCQ13519 176 aa15.11■□□□□ 0.01
UBA3-201ENST00000349511 E4F1Q66K89 784 aaPredicted RBP15.11■□□□□ 0.01
UBA3-201ENST00000349511 DTHD1Q6ZMT9 781 aa15.11■□□□□ 0.01
UBA3-201ENST00000349511 DHX58Q96C10 678 aa15.11■□□□□ 0.01
UBA3-201ENST00000349511 AFG3L2Q9Y4W6 797 aa15.11■□□□□ 0.01
UBA3-201ENST00000349511 ZNF536O15090 1300 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 PHIPQ8WWQ0 1821 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 IQCA1LA6NCM1 817 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 TRAF5O00463 557 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 PLA2G6O60733 806 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 TECP42680 631 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 TXKP42681 527 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 ATG4CQ96DT6 458 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 ZFP91Q96JP5 570 aaPredicted RBP15.1■□□□□ 0.01
UBA3-201ENST00000349511 PLIN2Q99541 437 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 TUBE1Q9UJT0 475 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 ZNF215Q9UL58 517 aaPredicted RBP15.1■□□□□ 0.01
UBA3-201ENST00000349511 CCPG1Q9ULG6 757 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 CSADQ9Y600 493 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 FAM237AA0A1B0GTK4 181 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 SPDYE3A6NKU9 549 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 IKBKBO14920 756 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 UBXN2AP68543 259 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 FANCCQ00597 558 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 UTP14CQ5TAP6 766 aaKnown RBP15.1■□□□□ 0.01
UBA3-201ENST00000349511 KRBA2Q6ZNG9 492 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 KIF18AQ8NI77 898 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 ZC3H15Q8WU90 426 aaKnown RBP15.1■□□□□ 0.01
UBA3-201ENST00000349511 RRAGCQ9HB90 399 aa15.1■□□□□ 0.01
UBA3-201ENST00000349511 OR52Z1P0C646 297 aa15.09■□□□□ 0.01
UBA3-201ENST00000349511 ALAS1P13196 640 aa15.09■□□□□ 0.01
UBA3-201ENST00000349511 CALCRLQ16602 461 aa15.09■□□□□ 0.01
UBA3-201ENST00000349511 NOL9Q5SY16 702 aaKnown RBP15.09■□□□□ 0.01
UBA3-201ENST00000349511 ARL6IP4Q66PJ3 421 aaKnown RBP15.09■□□□□ 0.01
UBA3-201ENST00000349511 ZNF526Q8TF50 670 aaPredicted RBP15.09■□□□□ 0.01
UBA3-201ENST00000349511 STAMQ92783 540 aa15.09■□□□□ 0.01
UBA3-201ENST00000349511 OTUD5Q96G74 571 aa15.09■□□□□ 0.01
UBA3-201ENST00000349511 OGFRQ9NZT2 677 aa15.09■□□□□ 0.01
UBA3-201ENST00000349511 KIF2AO00139 706 aaPredicted RBP15.08■□□□□ 0.01
UBA3-201ENST00000349511 SFPQP23246 707 aaKnown RBP eCLIP15.08■□□□□ 0.01
UBA3-201ENST00000349511 CASP1P29466 404 aa15.08■□□□□ 0.01
UBA3-201ENST00000349511 NF2P35240 595 aa15.08■□□□□ 0.01
UBA3-201ENST00000349511 IREB2P48200 963 aaKnown RBP15.08■□□□□ 0.01
UBA3-201ENST00000349511 PPP1R13BQ96KQ4 1090 aa15.08■□□□□ 0.01
UBA3-201ENST00000349511 HSD3B7Q9H2F3 369 aa15.08■□□□□ 0.01
UBA3-201ENST00000349511 DDX25Q9UHL0 483 aaKnown RBP15.08■□□□□ 0.01
UBA3-201ENST00000349511 PPP1R9AQ9ULJ8 1098 aa15.08■□□□□ 0.01
UBA3-201ENST00000349511 CTDP1Q9Y5B0 961 aaPredicted RBP15.08■□□□□ 0.01
UBA3-201ENST00000349511 ZC3H4Q9UPT8 1303 aaKnown RBP15.08■□□□□ 0
UBA3-201ENST00000349511 OTOFQ9HC10 1997 aa15.08■□□□□ 0
UBA3-201ENST00000349511 NFIBO00712 420 aa15.08■□□□□ 0
UBA3-201ENST00000349511 ICAM1P05362 532 aa15.08■□□□□ 0
UBA3-201ENST00000349511 PRR29P0C7W0 189 aa15.08■□□□□ 0
UBA3-201ENST00000349511 ATP1A3P13637 1013 aa15.08■□□□□ 0
UBA3-201ENST00000349511 AFMP43652 599 aa15.08■□□□□ 0
UBA3-201ENST00000349511 KARSQ15046 597 aaKnown RBP15.08■□□□□ 0
UBA3-201ENST00000349511 ERO1AQ96HE7 468 aa15.08■□□□□ 0
UBA3-201ENST00000349511 GLT8D2Q9H1C3 349 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms