RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 CCDC47Q96A33 483 aaKnown RBP20.14■□□□□ 0.82
PTP4A3-202ENST00000349124 NDST4Q9H3R1 872 aa20.14■□□□□ 0.82
PTP4A3-202ENST00000349124 CUEDC2Q9H467 287 aa20.14■□□□□ 0.82
PTP4A3-202ENST00000349124 TMEM51Q9NW97 253 aa20.14■□□□□ 0.82
PTP4A3-202ENST00000349124 SEC63Q9UGP8 760 aaKnown RBP20.14■□□□□ 0.82
PTP4A3-202ENST00000349124 ROBO3Q96MS0 1386 aa20.14■□□□□ 0.81
PTP4A3-202ENST00000349124 TRIM66O15016 1216 aa20.14■□□□□ 0.81
PTP4A3-202ENST00000349124 SLURP2P0DP57 97 aa20.14■□□□□ 0.81
PTP4A3-202ENST00000349124 GPSM2P81274 684 aa20.14■□□□□ 0.81
PTP4A3-202ENST00000349124 ECM1Q16610 540 aa20.14■□□□□ 0.81
PTP4A3-202ENST00000349124 FKBP15Q5T1M5 1219 aa20.14■□□□□ 0.81
PTP4A3-202ENST00000349124 LRRC47Q8N1G4 583 aaKnown RBP20.14■□□□□ 0.81
PTP4A3-202ENST00000349124 SECISBP2LQ93073 1101 aaKnown RBP20.14■□□□□ 0.81
PTP4A3-202ENST00000349124 CALML4Q96GE6 196 aa20.14■□□□□ 0.81
PTP4A3-202ENST00000349124 KANSL2Q9H9L4 492 aa20.14■□□□□ 0.81
PTP4A3-202ENST00000349124 SIK3Q9Y2K2 1263 aa20.14■□□□□ 0.81
PTP4A3-202ENST00000349124 A0A0U1RQG5 324 aaPredicted RBP20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 VAV2P52735 878 aa20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 VWA3BQ502W6 1294 aa20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 C16orf86Q6ZW13 317 aa20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 RRAGAQ7L523 313 aa20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 RETREG2Q8NC44 543 aa20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 MTMR9Q96QG7 549 aa20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 PURBQ96QR8 312 aaKnown RBP20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 HPCAL4Q9UM19 191 aa20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 RTCBQ9Y3I0 505 aaKnown RBP20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 PCDHA13Q9Y5I0 950 aa20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 RNF40O75150 1001 aa20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 GSTO1P78417 241 aa20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 CALCRLQ16602 461 aa20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 CNNM4Q6P4Q7 775 aa20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 CREG2Q8IUH2 290 aa20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 GOLGA5Q8TBA6 731 aa20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 IFIH1Q9BYX4 1025 aaKnown RBP20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 GPCPD1Q9NPB8 672 aa20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 ZC3H4Q9UPT8 1303 aaKnown RBP20.13■□□□□ 0.81
PTP4A3-202ENST00000349124 NCK2O43639 380 aa20.12■□□□□ 0.81
PTP4A3-202ENST00000349124 AMPD3Q01432 767 aa20.12■□□□□ 0.81
PTP4A3-202ENST00000349124 SLC7A5Q01650 507 aa20.12■□□□□ 0.81
PTP4A3-202ENST00000349124 APBA1Q02410 837 aa20.12■□□□□ 0.81
PTP4A3-202ENST00000349124 GRAPQ13588 217 aa20.12■□□□□ 0.81
PTP4A3-202ENST00000349124 SPA17Q15506 151 aa20.12■□□□□ 0.81
PTP4A3-202ENST00000349124 GRAPLQ8TC17 118 aaPredicted RBP20.12■□□□□ 0.81
PTP4A3-202ENST00000349124 FAM71BQ8TC56 605 aa20.12■□□□□ 0.81
PTP4A3-202ENST00000349124 SNED1Q8TER0 1413 aa20.12■□□□□ 0.81
PTP4A3-202ENST00000349124 LZTS2Q9BRK4 669 aa20.12■□□□□ 0.81
PTP4A3-202ENST00000349124 CD209Q9NNX6 404 aa20.12■□□□□ 0.81
PTP4A3-202ENST00000349124 PLAGL2Q9UPG8 496 aa20.12■□□□□ 0.81
PTP4A3-202ENST00000349124 UBE2SQ16763 222 aa20.12■□□□□ 0.81
PTP4A3-202ENST00000349124 CCNI2Q6ZMN8 369 aaPredicted RBP20.12■□□□□ 0.81
PTP4A3-202ENST00000349124 FAM114A1Q8IWE2 563 aa20.12■□□□□ 0.81
PTP4A3-202ENST00000349124 DMGDHQ9UI17 866 aaKnown RBP20.12■□□□□ 0.81
PTP4A3-202ENST00000349124 LEMD3Q9Y2U8 911 aa20.12■□□□□ 0.81
PTP4A3-202ENST00000349124 LRRC53A6NM62 1247 aa20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 KIF11P52732 1056 aa20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 NFRKBQ6P4R8 1299 aa20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 ZNF662Q6ZS27 426 aa20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 MSL3Q8N5Y2 521 aaKnown RBP20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 LRRC1Q9BTT6 524 aa20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 TBC1D7Q9P0N9 293 aa20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 CCNL1Q9UK58 526 aaPredicted RBP20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 ANKRD65E5RJM6 399 aa20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 LDHCP07864 332 aa20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 GGCXP38435 758 aa20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 RHBDL3P58872 404 aa20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 TMC4Q7Z404 712 aa20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 ZNF804AQ7Z570 1209 aa20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 LARP4BQ92615 738 aaKnown RBP20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 MAGEF1Q9HAY2 307 aa20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 UFL1O94874 794 aa20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 PICALMQ13492 652 aa20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 DDX12PQ92771 950 aa20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 FGFBP2Q9BYJ0 223 aa20.11■□□□□ 0.81
PTP4A3-202ENST00000349124 LAMB1P07942 1786 aa20.1■□□□□ 0.81
PTP4A3-202ENST00000349124 GPR75-ASB3A0A0A6YYF3 556 aa20.1■□□□□ 0.81
PTP4A3-202ENST00000349124 AGPSO00116 658 aa20.1■□□□□ 0.81
PTP4A3-202ENST00000349124 TUBBP07437 444 aa20.1■□□□□ 0.81
PTP4A3-202ENST00000349124 PDHBP11177 359 aa20.1■□□□□ 0.81
PTP4A3-202ENST00000349124 GFPT1Q06210 699 aaPredicted RBP20.1■□□□□ 0.81
PTP4A3-202ENST00000349124 MAPK8IP2Q13387 824 aaPredicted RBP20.1■□□□□ 0.81
PTP4A3-202ENST00000349124 EHBP1Q8NDI1 1231 aa20.1■□□□□ 0.81
PTP4A3-202ENST00000349124 SELENOOQ9BVL4 669 aa20.1■□□□□ 0.81
PTP4A3-202ENST00000349124 DEF6Q9H4E7 631 aa20.1■□□□□ 0.81
PTP4A3-202ENST00000349124 NLRC4Q9NPP4 1024 aa20.1■□□□□ 0.81
PTP4A3-202ENST00000349124 FEZ2Q9UHY8 353 aaPredicted RBP20.1■□□□□ 0.81
PTP4A3-202ENST00000349124 SNX12Q9UMY4 172 aa20.1■□□□□ 0.81
PTP4A3-202ENST00000349124 AKR1B10O60218 316 aa20.1■□□□□ 0.81
PTP4A3-202ENST00000349124 TNNI2P48788 182 aa20.1■□□□□ 0.81
PTP4A3-202ENST00000349124 SNX29Q8TEQ0 813 aa20.1■□□□□ 0.81
PTP4A3-202ENST00000349124 CDK5RAP3Q96JB5 506 aa20.1■□□□□ 0.81
PTP4A3-202ENST00000349124 ROBO1Q9Y6N7 1651 aa20.09■□□□□ 0.81
PTP4A3-202ENST00000349124 A0A1W2PQJ5 194 aa20.09■□□□□ 0.81
PTP4A3-202ENST00000349124 BUB1O43683 1085 aa20.09■□□□□ 0.81
PTP4A3-202ENST00000349124 PRPF6O94906 941 aaKnown RBP20.09■□□□□ 0.81
PTP4A3-202ENST00000349124 MFSD14BQ5SR56 506 aa20.09■□□□□ 0.81
PTP4A3-202ENST00000349124 TTBK2Q6IQ55 1244 aa20.09■□□□□ 0.81
PTP4A3-202ENST00000349124 LEKR1Q6ZMV7 388 aa20.09■□□□□ 0.81
PTP4A3-202ENST00000349124 UNC13DQ70J99 1090 aa20.09■□□□□ 0.81
PTP4A3-202ENST00000349124 TANGO6Q9C0B7 1094 aa20.09■□□□□ 0.81
PTP4A3-202ENST00000349124 SH2D4AQ9H788 454 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms