RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 PRPF31Q8WWY3 499 aaKnown RBP16.9■□□□□ 0.3
PTPRO-202ENST00000348962 OSBP2Q969R2 916 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 PUS7LQ9H0K6 701 aaKnown RBP16.9■□□□□ 0.3
PTPRO-202ENST00000348962 SNX25Q9H3E2 840 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 CUL4BQ13620 913 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 P3H4Q92791 437 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 COA7Q96BR5 231 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 GH2P01242 217 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 IFNAR1P17181 557 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 HLFQ16534 295 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 RASGRP4Q8TDF6 673 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 CLIC6Q96NY7 704 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 TRERF1Q96PN7 1200 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 STK17AQ9UEE5 414 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 HPDP32754 393 aaPredicted RBP16.9■□□□□ 0.3
PTPRO-202ENST00000348962 MAN1A1P33908 653 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 MTMR3Q13615 1198 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 SLC39A14Q15043 492 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 CTAGE3PQ8IX95 158 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 TIGD1Q96MW7 591 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 NCAPD2Q15021 1401 aa16.89■□□□□ 0.3
PTPRO-202ENST00000348962 PSMC2P35998 433 aaKnown RBP16.89■□□□□ 0.29
PTPRO-202ENST00000348962 ZNF445P59923 1031 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 GRK7Q8WTQ7 553 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 VPS37BQ9H9H4 285 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 PNMA6FA0A0J9YX94 578 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 MYCP01106 439 aaPredicted RBP16.89■□□□□ 0.29
PTPRO-202ENST00000348962 XPAP23025 273 aaPredicted RBP16.89■□□□□ 0.29
PTPRO-202ENST00000348962 NR2F2P24468 414 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 FAM149B1Q96BN6 582 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 RPGRIP1Q96KN7 1286 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 COL15A1P39059 1388 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 ADGBQ8N7X0 1667 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 A0A1W2PQ27 194 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 A0A1W2PQ64 194 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 A0A1W2PQD8 194 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 A6NJR5 290 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 EIF2AK2P19525 551 aaKnown RBP16.89■□□□□ 0.29
PTPRO-202ENST00000348962 BRIP1Q9BX63 1249 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 CCDC68Q9H2F9 335 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 CD209Q9NNX6 404 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 MAP3K4Q9Y6R4 1608 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 IQCA1LA6NCM1 817 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 LIFRP42702 1097 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 MTERF2Q49AM1 385 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 APOBEC3FQ8IUX4 373 aaKnown RBP16.89■□□□□ 0.29
PTPRO-202ENST00000348962 NME8Q8N427 588 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.89■□□□□ 0.29
PTPRO-202ENST00000348962 ARHGEF1Q92888 912 aaKnown RBP16.89■□□□□ 0.29
PTPRO-202ENST00000348962 CACYBPQ9HB71 228 aaKnown RBP16.89■□□□□ 0.29
PTPRO-202ENST00000348962 LMBRD1Q9NUN5 540 aa16.89■□□□□ 0.29
PTPRO-202ENST00000348962 MYL7Q01449 175 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 ZNF827Q17R98 1081 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 RNF207Q6ZRF8 634 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 SPON1Q9HCB6 807 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 JCADQ9P266 1359 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 CDK12Q9NYV4 1490 aaPredicted RBP16.88■□□□□ 0.29
PTPRO-202ENST00000348962 TBC1D8O95759 1140 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 ZHX2Q9Y6X8 837 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 A6NNZ2 444 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 I3L4J1 428 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 ECE2O60344 883 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 PPP6R2O75170 966 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 TUBB8Q3ZCM7 444 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 ZNF589Q86UQ0 364 aaPredicted RBP16.88■□□□□ 0.29
PTPRO-202ENST00000348962 PALM2Q8IXS6 379 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 GPR101Q96P66 508 aaPredicted RBP16.88■□□□□ 0.29
PTPRO-202ENST00000348962 WRNIP1Q96S55 665 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 CARD6Q9BX69 1037 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 TACC3Q9Y6A5 838 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 PRPF3O43395 683 aaKnown RBP16.88■□□□□ 0.29
PTPRO-202ENST00000348962 SDCCAG8Q86SQ7 713 aaPredicted RBP16.88■□□□□ 0.29
PTPRO-202ENST00000348962 SYNE4Q8N205 404 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 ZSWIM5Q9P217 1185 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 SLC12A6Q9UHW9 1150 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 MINPP1Q9UNW1 487 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 PCDHB4Q9Y5E5 795 aa16.88■□□□□ 0.29
PTPRO-202ENST00000348962 BZW2Q9Y6E2 419 aaKnown RBP16.88■□□□□ 0.29
PTPRO-202ENST00000348962 PLEKHG2Q9H7P9 1386 aa16.87■□□□□ 0.29
PTPRO-202ENST00000348962 MAGI3Q5TCQ9 1506 aa16.87■□□□□ 0.29
PTPRO-202ENST00000348962 ZNF233A6NK53 670 aa16.87■□□□□ 0.29
PTPRO-202ENST00000348962 GOLGA8CPA6NN73 597 aa16.87■□□□□ 0.29
PTPRO-202ENST00000348962 HOXD10P28358 340 aa16.87■□□□□ 0.29
PTPRO-202ENST00000348962 MNAT1P51948 309 aa16.87■□□□□ 0.29
PTPRO-202ENST00000348962 PPP1R2P3Q6NXS1 205 aa16.87■□□□□ 0.29
PTPRO-202ENST00000348962 RASEFQ8IZ41 740 aa16.87■□□□□ 0.29
PTPRO-202ENST00000348962 TDRD3Q9H7E2 651 aaKnown RBP16.87■□□□□ 0.29
PTPRO-202ENST00000348962 PIH1D3Q9NQM4 214 aaKnown RBP16.87■□□□□ 0.29
PTPRO-202ENST00000348962 TSPOAP1O95153 1857 aa16.87■□□□□ 0.29
PTPRO-202ENST00000348962 RGS12O14924 1447 aa16.87■□□□□ 0.29
PTPRO-202ENST00000348962 USP17L5A8MUK1 530 aa16.87■□□□□ 0.29
PTPRO-202ENST00000348962 MYO1FO00160 1098 aa16.87■□□□□ 0.29
PTPRO-202ENST00000348962 CIB2O75838 187 aa16.87■□□□□ 0.29
PTPRO-202ENST00000348962 GNAT1P11488 350 aa16.87■□□□□ 0.29
PTPRO-202ENST00000348962 ELF1P32519 619 aa16.87■□□□□ 0.29
PTPRO-202ENST00000348962 ADKP55263 362 aaKnown RBP16.87■□□□□ 0.29
PTPRO-202ENST00000348962 TFAMQ00059 246 aaKnown RBP16.87■□□□□ 0.29
PTPRO-202ENST00000348962 SURF1Q15526 300 aa16.87■□□□□ 0.29
PTPRO-202ENST00000348962 FAM186BQ8IYM0 893 aa16.87■□□□□ 0.29
PTPRO-202ENST00000348962 SAR1BQ9Y6B6 198 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms