RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 SPRED2Q7Z698 418 aa11.36□□□□□ -0.59
MRPL55-204ENST00000348259 ZNF589Q86UQ0 364 aaPredicted RBP11.36□□□□□ -0.59
MRPL55-204ENST00000348259 FAM160B2Q86V87 743 aa11.36□□□□□ -0.59
MRPL55-204ENST00000348259 STAG1Q8WVM7 1258 aa11.36□□□□□ -0.59
MRPL55-204ENST00000348259 PURBQ96QR8 312 aaKnown RBP11.36□□□□□ -0.59
MRPL55-204ENST00000348259 CTAGE1Q96RT6 745 aa11.36□□□□□ -0.59
MRPL55-204ENST00000348259 VTA1Q9NP79 307 aa11.36□□□□□ -0.59
MRPL55-204ENST00000348259 HOMER2Q9NSB8 354 aa11.36□□□□□ -0.59
MRPL55-204ENST00000348259 TRMT13Q9NUP7 481 aaKnown RBP11.36□□□□□ -0.59
MRPL55-204ENST00000348259 COG5Q9UP83 839 aa11.36□□□□□ -0.59
MRPL55-204ENST00000348259 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.36□□□□□ -0.59
MRPL55-204ENST00000348259 RBM8AQ9Y5S9 174 aaKnown RBP11.36□□□□□ -0.59
MRPL55-204ENST00000348259 TNKSO95271 1327 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 LOC102724159A0A0B4J2E5 919 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 MINDY4BA8MYZ0 360 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 M0R2C6 588 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 PITPNM1O00562 1244 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 GPAA1O43292 621 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 CD2BP2O95400 341 aaKnown RBP11.35□□□□□ -0.59
MRPL55-204ENST00000348259 CYP2C9P11712 490 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 PSMA5P28066 241 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 DDIT3P35638 169 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 NEK4P51957 841 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 KRT32Q14532 448 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 PWP2Q15269 919 aaKnown RBP11.35□□□□□ -0.59
MRPL55-204ENST00000348259 TMEM67Q5HYA8 995 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 CREB3L3Q68CJ9 461 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 RASEFQ8IZ41 740 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 STK11IPQ8N1F8 1099 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 PHOSPHO2Q8TCD6 241 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 TRERF1Q96PN7 1200 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 SLC9A7Q96T83 725 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 AP5M1Q9H0R1 490 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 TSPYL2Q9H2G4 693 aaPredicted RBP11.35□□□□□ -0.59
MRPL55-204ENST00000348259 ZSWIM6Q9HCJ5 1215 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 ATG2AQ2TAZ0 1938 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 KIAA1217Q5T5P2 1943 aa11.35□□□□□ -0.59
MRPL55-204ENST00000348259 C5orf42Q9H799 3197 aa11.34□□□□□ -0.59
MRPL55-204ENST00000348259 SLC27A2O14975 620 aa11.34□□□□□ -0.59
MRPL55-204ENST00000348259 GPR37L1O60883 481 aa11.34□□□□□ -0.59
MRPL55-204ENST00000348259 RFC2P35250 354 aa11.34□□□□□ -0.59
MRPL55-204ENST00000348259 HERC6Q8IVU3 1022 aa11.34□□□□□ -0.59
MRPL55-204ENST00000348259 IFNL3Q8IZI9 196 aa11.34□□□□□ -0.59
MRPL55-204ENST00000348259 CHURC1Q8WUH1 139 aa11.34□□□□□ -0.59
MRPL55-204ENST00000348259 CD320Q9NPF0 282 aa11.34□□□□□ -0.59
MRPL55-204ENST00000348259 IL17RBQ9NRM6 502 aa11.34□□□□□ -0.59
MRPL55-204ENST00000348259 PRR12Q9ULL5 1215 aa11.34□□□□□ -0.59
MRPL55-204ENST00000348259 CIZ1Q9ULV3 898 aaPredicted RBP11.34□□□□□ -0.59
MRPL55-204ENST00000348259 ZNF318Q5VUA4 2279 aa11.34□□□□□ -0.59
MRPL55-204ENST00000348259 ZBBXA8MT70 800 aa11.33□□□□□ -0.6
MRPL55-204ENST00000348259 PATL2C9JE40 543 aaKnown RBP11.33□□□□□ -0.6
MRPL55-204ENST00000348259 ZEB2O60315 1214 aa11.33□□□□□ -0.6
MRPL55-204ENST00000348259 IQCF3P0C7M6 154 aa11.33□□□□□ -0.6
MRPL55-204ENST00000348259 SUPT20HL2P0C7V6 817 aa11.33□□□□□ -0.6
MRPL55-204ENST00000348259 HSPD1P10809 573 aaKnown RBP11.33□□□□□ -0.6
MRPL55-204ENST00000348259 ALAS1P13196 640 aa11.33□□□□□ -0.6
MRPL55-204ENST00000348259 GNAT2P19087 354 aa11.33□□□□□ -0.6
MRPL55-204ENST00000348259 EDNRBP24530 442 aa11.33□□□□□ -0.6
MRPL55-204ENST00000348259 ALDH5A1P51649 535 aaPredicted RBP11.33□□□□□ -0.6
MRPL55-204ENST00000348259 GRB10Q13322 594 aa11.33□□□□□ -0.6
MRPL55-204ENST00000348259 VPS53Q5VIR6 699 aa11.33□□□□□ -0.6
MRPL55-204ENST00000348259 RCSD1Q6JBY9 416 aa11.33□□□□□ -0.6
MRPL55-204ENST00000348259 BTNL9Q6UXG8 535 aa11.33□□□□□ -0.6
MRPL55-204ENST00000348259 EEPD1Q7L9B9 569 aa11.33□□□□□ -0.6
MRPL55-204ENST00000348259 ZNF444Q8N0Y2 327 aaPredicted RBP11.33□□□□□ -0.6
MRPL55-204ENST00000348259 MICALL1Q8N3F8 863 aa11.33□□□□□ -0.6
MRPL55-204ENST00000348259 TTC14Q96N46 770 aa11.33□□□□□ -0.6
MRPL55-204ENST00000348259 SEC62Q99442 399 aaKnown RBP11.33□□□□□ -0.6
MRPL55-204ENST00000348259 RANBP17Q9H2T7 1088 aaKnown RBP11.33□□□□□ -0.6
MRPL55-204ENST00000348259 POLR3EQ9NVU0 708 aa11.33□□□□□ -0.6
MRPL55-204ENST00000348259 CTNNA3Q9UI47 895 aa11.33□□□□□ -0.6
MRPL55-204ENST00000348259 MICAL3Q7RTP6 2002 aa11.32□□□□□ -0.6
MRPL55-204ENST00000348259 A6NJR5 290 aa11.32□□□□□ -0.6
MRPL55-204ENST00000348259 ICAM1P05362 532 aa11.32□□□□□ -0.6
MRPL55-204ENST00000348259 FGRP09769 529 aa11.32□□□□□ -0.6
MRPL55-204ENST00000348259 SLC1A4P43007 532 aa11.32□□□□□ -0.6
MRPL55-204ENST00000348259 SNAP25P60880 206 aa11.32□□□□□ -0.6
MRPL55-204ENST00000348259 TFAP4Q01664 338 aa11.32□□□□□ -0.6
MRPL55-204ENST00000348259 PTPN11Q06124 597 aaPredicted RBP11.32□□□□□ -0.6
MRPL55-204ENST00000348259 RBL2Q08999 1139 aa11.32□□□□□ -0.6
MRPL55-204ENST00000348259 NBPF20Q3BBV1 942 aa11.32□□□□□ -0.6
MRPL55-204ENST00000348259 NFRKBQ6P4R8 1299 aa11.32□□□□□ -0.6
MRPL55-204ENST00000348259 KCTD1Q719H9 257 aa11.32□□□□□ -0.6
MRPL55-204ENST00000348259 NOL8Q76FK4 1167 aaKnown RBP11.32□□□□□ -0.6
MRPL55-204ENST00000348259 RUFY3Q7L099 469 aa11.32□□□□□ -0.6
MRPL55-204ENST00000348259 DEFB128Q7Z7B8 93 aa11.32□□□□□ -0.6
MRPL55-204ENST00000348259 MTG1Q9BT17 334 aaPredicted RBP11.32□□□□□ -0.6
MRPL55-204ENST00000348259 CERS4Q9HA82 394 aa11.32□□□□□ -0.6
MRPL55-204ENST00000348259 ZNF287Q9HBT7 754 aa11.32□□□□□ -0.6
MRPL55-204ENST00000348259 LMCD1Q9NZU5 365 aa11.32□□□□□ -0.6
MRPL55-204ENST00000348259 CTDP1Q9Y5B0 961 aaPredicted RBP11.32□□□□□ -0.6
MRPL55-204ENST00000348259 CYP46A1Q9Y6A2 500 aa11.32□□□□□ -0.6
MRPL55-204ENST00000348259 USP34Q70CQ2 3546 aa11.32□□□□□ -0.6
MRPL55-204ENST00000348259 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-204ENST00000348259 LCHNA4D1U4 455 aa11.31□□□□□ -0.6
MRPL55-204ENST00000348259 PI4K2BG5E9Z4 385 aa11.31□□□□□ -0.6
MRPL55-204ENST00000348259 NFIBO00712 420 aa11.31□□□□□ -0.6
MRPL55-204ENST00000348259 GTPBP6O43824 516 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-204ENST00000348259 BAIAP3O94812 1187 aa11.31□□□□□ -0.6
MRPL55-204ENST00000348259 HMGB1P09429 215 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms