RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 STAT3P40763 770 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 BMS1Q14692 1282 aaKnown RBP6.77□□□□□ -1.33
CLCN3-201ENST00000347613 KCNB1Q14721 858 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 FOXR1Q6PIV2 292 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 SH3BP5LQ7L8J4 393 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 CSGALNACT2Q8N6G5 542 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 GPR161Q8N6U8 529 aaKnown RBP6.77□□□□□ -1.33
CLCN3-201ENST00000347613 RIN2Q8WYP3 895 aaPredicted RBP6.77□□□□□ -1.33
CLCN3-201ENST00000347613 TRIM47Q96LD4 638 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 MLXIPQ9HAP2 919 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.77□□□□□ -1.33
CLCN3-201ENST00000347613 CAPN6Q9Y6Q1 641 aa6.77□□□□□ -1.33
CLCN3-201ENST00000347613 ZC3H4Q9UPT8 1303 aaKnown RBP6.77□□□□□ -1.33
CLCN3-201ENST00000347613 GREB1LQ9C091 1923 aaPredicted RBP6.77□□□□□ -1.33
CLCN3-201ENST00000347613 BRWD3Q6RI45 1802 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 CALML3P27482 149 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 SMC1AQ14683 1233 aaKnown RBP6.76□□□□□ -1.33
CLCN3-201ENST00000347613 KIF4BQ2VIQ3 1234 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 TMCO3Q6UWJ1 677 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 TRAPPC11Q7Z392 1133 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 CNGA4Q8IV77 575 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 ANKRD13CQ8N6S4 541 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 P2RX5Q93086 422 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 C7orf25Q9BPX7 421 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 NHEJ1Q9H9Q4 299 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-201ENST00000347613 PDE11AQ9HCR9 933 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 SIK3Q9Y2K2 1263 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 LRRC37AA6NMS7 1700 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 COL11A2P13942 1736 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-201ENST00000347613 C6orf229H3BNL8 230 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 BMP15O95972 392 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 SNHG28P0DPA3 235 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 CYP2C19P33261 490 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 CLK2P49760 499 aaKnown RBP6.76□□□□□ -1.33
CLCN3-201ENST00000347613 PSMC6P62333 389 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 ASIC1P78348 528 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 GABPB1Q06547 395 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-201ENST00000347613 EHHADHQ08426 723 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 MEA1Q16626 185 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 APOBEC3HQ6NTF7 200 aaKnown RBP6.76□□□□□ -1.33
CLCN3-201ENST00000347613 CYP26C1Q6V0L0 522 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 ZNF804AQ7Z570 1209 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 NEK8Q86SG6 692 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 RASSF8Q8NHQ8 419 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 RABGGTAQ92696 567 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 DNAJC19Q96DA6 116 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 TRERF1Q96PN7 1200 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 CTAGE1Q96RT6 745 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 PSMB7Q99436 277 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 NOL10Q9BSC4 688 aaKnown RBP6.76□□□□□ -1.33
CLCN3-201ENST00000347613 PLEKHA4Q9H4M7 779 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 L1RE1Q9UN81 338 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 DDTLA6NHG4 134 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-201ENST00000347613 E9PMD0 336 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 NCK2O43639 380 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 TLR2O60603 784 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 CXCR5P32302 372 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 CASP5P51878 434 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 NONOQ15233 471 aaKnown RBP eCLIP6.76□□□□□ -1.33
CLCN3-201ENST00000347613 CT47A1Q5JQC4 288 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-201ENST00000347613 FKBP15Q5T1M5 1219 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 SPTY2D1Q68D10 685 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-201ENST00000347613 C15orf52Q6ZUT6 534 aaKnown RBP6.76□□□□□ -1.33
CLCN3-201ENST00000347613 TMTC1Q8IUR5 882 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 CYP2W1Q8TAV3 490 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 COG1Q8WTW3 980 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 FAM207AQ9NSI2 230 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-201ENST00000347613 GGA1Q9UJY5 639 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 RAB21Q9UL25 225 aa6.76□□□□□ -1.33
CLCN3-201ENST00000347613 MACROD2A1Z1Q3 448 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 CCP110O43303 1012 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 NOL4O94818 638 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 BAG3O95817 575 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 TCP10Q12799 353 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 CENPPQ6IPU0 288 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 CDC42EP5Q6NZY7 148 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 LRRC55Q6ZSA7 311 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 ZSCAN29Q8IWY8 852 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-201ENST00000347613 MSANTD4Q8NCY6 345 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 OR8K1Q8NGG5 319 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 GOLGA1Q92805 767 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 RPGRQ92834 1020 aaKnown RBP6.75□□□□□ -1.33
CLCN3-201ENST00000347613 GJD4Q96KN9 370 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-201ENST00000347613 NAA15Q9BXJ9 866 aaKnown RBP6.75□□□□□ -1.33
CLCN3-201ENST00000347613 LRWD1Q9UFC0 647 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 MYO6Q9UM54 1294 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 ZBTB39O15060 712 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 KIF5CO60282 957 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 TRIM37O94972 964 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 CCNE1P24864 410 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 HOXD13P35453 343 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 PRPHP41219 470 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 TBC1D8BQ0IIM8 1120 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 FILIP1LQ4L180 1135 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 ARSHQ5FYA8 562 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 KIAA1755Q5JYT7 1200 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 SEPT12Q8IYM1 358 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 DDX12PQ92771 950 aa6.75□□□□□ -1.33
CLCN3-201ENST00000347613 FAM163AQ96GL9 167 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-201ENST00000347613 THAP9Q9H5L6 903 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms