RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 CABP4P57796 275 aa16.94■□□□□ 0.3
LMNA-201ENST00000347559 EHHADHQ08426 723 aa16.94■□□□□ 0.3
LMNA-201ENST00000347559 EMC10Q5UCC4 262 aa16.94■□□□□ 0.3
LMNA-201ENST00000347559 ANKRD40Q6AI12 368 aa16.94■□□□□ 0.3
LMNA-201ENST00000347559 TBC1D1Q86TI0 1168 aaPredicted RBP16.94■□□□□ 0.3
LMNA-201ENST00000347559 CEP120Q8N960 986 aa16.94■□□□□ 0.3
LMNA-201ENST00000347559 MICAL1Q8TDZ2 1067 aa16.94■□□□□ 0.3
LMNA-201ENST00000347559 LPIN2Q92539 896 aa16.94■□□□□ 0.3
LMNA-201ENST00000347559 NLRP5P59047 1200 aa16.93■□□□□ 0.3
LMNA-201ENST00000347559 XRCC4Q13426 336 aa16.93■□□□□ 0.3
LMNA-201ENST00000347559 MIGA1Q8NAN2 632 aa16.93■□□□□ 0.3
LMNA-201ENST00000347559 HELBQ8NG08 1087 aaPredicted RBP16.93■□□□□ 0.3
LMNA-201ENST00000347559 MDM1Q8TC05 714 aa16.93■□□□□ 0.3
LMNA-201ENST00000347559 CUL5Q93034 780 aa16.93■□□□□ 0.3
LMNA-201ENST00000347559 SLC12A6Q9UHW9 1150 aa16.93■□□□□ 0.3
LMNA-201ENST00000347559 PLAGL2Q9UPG8 496 aa16.93■□□□□ 0.3
LMNA-201ENST00000347559 TNKSO95271 1327 aa16.93■□□□□ 0.3
LMNA-201ENST00000347559 LRRC53A6NM62 1247 aa16.93■□□□□ 0.3
LMNA-201ENST00000347559 EIF4E1BA6NMX2 242 aaKnown RBP16.93■□□□□ 0.3
LMNA-201ENST00000347559 SMIM22K7EJ46 135 aa16.93■□□□□ 0.3
LMNA-201ENST00000347559 KIF3CO14782 793 aa16.93■□□□□ 0.3
LMNA-201ENST00000347559 MGRN1O60291 552 aa16.93■□□□□ 0.3
LMNA-201ENST00000347559 PALMO75781 387 aa16.93■□□□□ 0.3
LMNA-201ENST00000347559 MAGOHP61326 146 aaKnown RBP16.93■□□□□ 0.3
LMNA-201ENST00000347559 BYSLQ13895 437 aaKnown RBP16.93■□□□□ 0.3
LMNA-201ENST00000347559 SYNE4Q8N205 404 aa16.93■□□□□ 0.3
LMNA-201ENST00000347559 MREGQ8N565 214 aa16.93■□□□□ 0.3
LMNA-201ENST00000347559 MAGEC3Q8TD91 643 aa16.93■□□□□ 0.3
LMNA-201ENST00000347559 MAGOHBQ96A72 148 aaKnown RBP16.93■□□□□ 0.3
LMNA-201ENST00000347559 PPP2R2AP63151 447 aa16.92■□□□□ 0.3
LMNA-201ENST00000347559 TMTC2Q8N394 836 aa16.92■□□□□ 0.3
LMNA-201ENST00000347559 GSG1L2A8MUP6 293 aa16.92■□□□□ 0.3
LMNA-201ENST00000347559 CHADLQ6NUI6 762 aa16.92■□□□□ 0.3
LMNA-201ENST00000347559 ZNF483Q8TF39 744 aaPredicted RBP16.92■□□□□ 0.3
LMNA-201ENST00000347559 LMBR1Q8WVP7 490 aa16.92■□□□□ 0.3
LMNA-201ENST00000347559 TBX22Q9Y458 520 aa16.92■□□□□ 0.3
LMNA-201ENST00000347559 SOS2Q07890 1332 aaPredicted RBP16.92■□□□□ 0.3
LMNA-201ENST00000347559 ADAMTS3O15072 1205 aa16.92■□□□□ 0.3
LMNA-201ENST00000347559 ZNF844Q08AG5 666 aa16.92■□□□□ 0.3
LMNA-201ENST00000347559 CCDC63Q8NA47 563 aa16.92■□□□□ 0.3
LMNA-201ENST00000347559 CCT6BQ92526 530 aa16.92■□□□□ 0.3
LMNA-201ENST00000347559 HPS3Q969F9 1004 aa16.92■□□□□ 0.3
LMNA-201ENST00000347559 SPATS2LQ9NUQ6 558 aaKnown RBP16.92■□□□□ 0.3
LMNA-201ENST00000347559 DDX60Q8IY21 1712 aaKnown RBP16.91■□□□□ 0.3
LMNA-201ENST00000347559 ANP32DO95626 131 aa16.91■□□□□ 0.3
LMNA-201ENST00000347559 KCNB1Q14721 858 aa16.91■□□□□ 0.3
LMNA-201ENST00000347559 FAM133BQ5BKY9 247 aaKnown RBP16.91■□□□□ 0.3
LMNA-201ENST00000347559 MIIPQ5JXC2 388 aa16.91■□□□□ 0.3
LMNA-201ENST00000347559 PROSER2Q86WR7 435 aaPredicted RBP16.91■□□□□ 0.3
LMNA-201ENST00000347559 PYM1Q9BRP8 204 aaKnown RBP16.91■□□□□ 0.3
LMNA-201ENST00000347559 SPEF2Q9C093 1822 aa16.91■□□□□ 0.3
LMNA-201ENST00000347559 HSPA9P38646 679 aaKnown RBP16.91■□□□□ 0.3
LMNA-201ENST00000347559 MAP2K1Q02750 393 aaPredicted RBP16.91■□□□□ 0.3
LMNA-201ENST00000347559 PDE4DQ08499 809 aa16.91■□□□□ 0.3
LMNA-201ENST00000347559 KRT71Q3SY84 523 aa16.91■□□□□ 0.3
LMNA-201ENST00000347559 CACNA2D4Q7Z3S7 1137 aa16.91■□□□□ 0.3
LMNA-201ENST00000347559 TATDN2Q93075 761 aa16.91■□□□□ 0.3
LMNA-201ENST00000347559 P2RX5Q93086 422 aa16.91■□□□□ 0.3
LMNA-201ENST00000347559 NACAP1Q9BZK3 213 aa16.91■□□□□ 0.3
LMNA-201ENST00000347559 TAF1DQ9H5J8 278 aaPredicted RBP16.91■□□□□ 0.3
LMNA-201ENST00000347559 NLRC4Q9NPP4 1024 aa16.91■□□□□ 0.3
LMNA-201ENST00000347559 PLCB1Q9NQ66 1216 aa16.91■□□□□ 0.3
LMNA-201ENST00000347559 DISC1Q9NRI5 854 aa16.91■□□□□ 0.3
LMNA-201ENST00000347559 SPATA31A3Q5VYP0 1347 aa16.91■□□□□ 0.3
LMNA-201ENST00000347559 UBA7P41226 1012 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 SLC8A3P57103 927 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 ERVK-9P63128 1117 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 UAP1Q16222 522 aaPredicted RBP16.9■□□□□ 0.3
LMNA-201ENST00000347559 NBPF9Q3BBW0 867 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 TOM1L2Q6ZVM7 507 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 IFNL2Q8IZJ0 200 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 LCORLQ8N3X6 602 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 ZBTB10Q96DT7 871 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 ARHGAP23Q9P227 1491 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 TCRBV5S4A2TA0A5A2 114 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 CDK17Q00537 523 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 ARID5AQ03989 594 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 GRIK3Q13003 919 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 RUFY4Q6ZNE9 571 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 HOOK2Q96ED9 719 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 FBXL5Q9UKA1 691 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 NFAT5O94916 1531 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 TRIM37O94972 964 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 PCCAP05165 728 aaPredicted RBP16.9■□□□□ 0.3
LMNA-201ENST00000347559 FCER1AP12319 257 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 TNNC1P63316 161 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 ALX1Q15699 326 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 HLFQ16534 295 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 FAM114A1Q8IWE2 563 aa16.9■□□□□ 0.3
LMNA-201ENST00000347559 SNAP23O00161 211 aa16.89■□□□□ 0.29
LMNA-201ENST00000347559 KLRC4O43908 158 aa16.89■□□□□ 0.29
LMNA-201ENST00000347559 CTNND1O60716 968 aaKnown RBP16.89■□□□□ 0.29
LMNA-201ENST00000347559 VEGFAP15692 232 aaPredicted RBP16.89■□□□□ 0.29
LMNA-201ENST00000347559 STK4Q13043 487 aa16.89■□□□□ 0.29
LMNA-201ENST00000347559 LACTB2Q53H82 288 aaPredicted RBP16.89■□□□□ 0.29
LMNA-201ENST00000347559 NAALADL2Q58DX5 795 aa16.89■□□□□ 0.29
LMNA-201ENST00000347559 AP1ARQ63HQ0 302 aa16.89■□□□□ 0.29
LMNA-201ENST00000347559 RCSD1Q6JBY9 416 aa16.89■□□□□ 0.29
LMNA-201ENST00000347559 GIMAP8Q8ND71 665 aaPredicted RBP16.89■□□□□ 0.29
LMNA-201ENST00000347559 RASGRP4Q8TDF6 673 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms