RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 SREBF1P36956 1147 aa21.67■■□□□ 1.06
CHMP4A-201ENST00000347519 CEBPZQ03701 1054 aaKnown RBP21.67■■□□□ 1.06
CHMP4A-201ENST00000347519 GPR142Q7Z601 462 aa21.67■■□□□ 1.06
CHMP4A-201ENST00000347519 ZFP91Q96JP5 570 aaPredicted RBP21.67■■□□□ 1.06
CHMP4A-201ENST00000347519 FGD4Q96M96 766 aa21.67■■□□□ 1.06
CHMP4A-201ENST00000347519 FRMPD4Q14CM0 1322 aa21.66■■□□□ 1.06
CHMP4A-201ENST00000347519 DNAJC25-GNG10A0A024R161 153 aa21.66■■□□□ 1.06
CHMP4A-201ENST00000347519 SOWAHBA6NEL2 793 aa21.66■■□□□ 1.06
CHMP4A-201ENST00000347519 FCER1AP12319 257 aa21.66■■□□□ 1.06
CHMP4A-201ENST00000347519 ARHGAP4P98171 946 aa21.66■■□□□ 1.06
CHMP4A-201ENST00000347519 CAP1Q01518 475 aa21.66■■□□□ 1.06
CHMP4A-201ENST00000347519 ZNF174Q15697 407 aa21.66■■□□□ 1.06
CHMP4A-201ENST00000347519 RILPL1Q5EBL4 403 aa21.66■■□□□ 1.06
CHMP4A-201ENST00000347519 TTC38Q5R3I4 469 aa21.66■■□□□ 1.06
CHMP4A-201ENST00000347519 MCTP2Q6DN12 878 aa21.66■■□□□ 1.06
CHMP4A-201ENST00000347519 NEK8Q86SG6 692 aa21.66■■□□□ 1.06
CHMP4A-201ENST00000347519 FAM133AQ8N9E0 248 aa21.66■■□□□ 1.06
CHMP4A-201ENST00000347519 CFHR5Q9BXR6 569 aa21.66■■□□□ 1.06
CHMP4A-201ENST00000347519 MAF1Q9H063 256 aa21.66■■□□□ 1.06
CHMP4A-201ENST00000347519 GDPD2Q9HCC8 539 aa21.66■■□□□ 1.06
CHMP4A-201ENST00000347519 PXMP2Q9NR77 195 aa21.66■■□□□ 1.06
CHMP4A-201ENST00000347519 NOL7Q9UMY1 257 aaKnown RBP21.66■■□□□ 1.06
CHMP4A-201ENST00000347519 ATP6V1DQ9Y5K8 247 aa21.66■■□□□ 1.06
CHMP4A-201ENST00000347519 PFASO15067 1338 aa21.66■■□□□ 1.06
CHMP4A-201ENST00000347519 POTEB2H3BUK9 544 aa21.65■■□□□ 1.06
CHMP4A-201ENST00000347519 TDP2O95551 362 aa21.65■■□□□ 1.06
CHMP4A-201ENST00000347519 EIF2AK2P19525 551 aaKnown RBP21.65■■□□□ 1.06
CHMP4A-201ENST00000347519 PTPREP23469 700 aa21.65■■□□□ 1.06
CHMP4A-201ENST00000347519 MAPK4P31152 587 aa21.65■■□□□ 1.06
CHMP4A-201ENST00000347519 KCTD2Q14681 263 aa21.65■■□□□ 1.06
CHMP4A-201ENST00000347519 LETM2Q2VYF4 491 aa21.65■■□□□ 1.06
CHMP4A-201ENST00000347519 ANO1Q5XXA6 986 aa21.65■■□□□ 1.06
CHMP4A-201ENST00000347519 CLEC17AQ6ZS10 378 aa21.65■■□□□ 1.06
CHMP4A-201ENST00000347519 PLEKHH3Q7Z736 793 aa21.65■■□□□ 1.06
CHMP4A-201ENST00000347519 ZNF396Q96N95 335 aaPredicted RBP21.65■■□□□ 1.06
CHMP4A-201ENST00000347519 RMDN3Q96TC7 470 aa21.65■■□□□ 1.06
CHMP4A-201ENST00000347519 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.65■■□□□ 1.06
CHMP4A-201ENST00000347519 MRVI1Q9Y6F6 885 aa21.65■■□□□ 1.06
CHMP4A-201ENST00000347519 COBLO75128 1261 aa21.64■■□□□ 1.06
CHMP4A-201ENST00000347519 NCLP19338 710 aaKnown RBP21.64■■□□□ 1.06
CHMP4A-201ENST00000347519 TRAPPC10P48553 1259 aa21.64■■□□□ 1.06
CHMP4A-201ENST00000347519 PTPAQ15257 358 aa21.64■■□□□ 1.06
CHMP4A-201ENST00000347519 SF3A1Q15459 793 aaKnown RBP21.64■■□□□ 1.06
CHMP4A-201ENST00000347519 CCAR1Q8IX12 1150 aaKnown RBP21.64■■□□□ 1.06
CHMP4A-201ENST00000347519 ARHGAP39Q9C0H5 1083 aa21.64■■□□□ 1.06
CHMP4A-201ENST00000347519 LRRC37A2A6NM11 1700 aa21.64■■□□□ 1.05
CHMP4A-201ENST00000347519 ZNF236Q9UL36 1845 aa21.64■■□□□ 1.05
CHMP4A-201ENST00000347519 ADORA2AP29274 412 aa21.63■■□□□ 1.05
CHMP4A-201ENST00000347519 NASPP49321 788 aaPredicted RBP21.63■■□□□ 1.05
CHMP4A-201ENST00000347519 KRT85P78386 507 aa21.63■■□□□ 1.05
CHMP4A-201ENST00000347519 GRB14Q14449 540 aa21.63■■□□□ 1.05
CHMP4A-201ENST00000347519 PGM5Q15124 567 aa21.63■■□□□ 1.05
CHMP4A-201ENST00000347519 TNS4Q8IZW8 715 aa21.63■■□□□ 1.05
CHMP4A-201ENST00000347519 PDCD2LQ9BRP1 358 aa21.63■■□□□ 1.05
CHMP4A-201ENST00000347519 RTEL1Q9NZ71 1219 aa21.63■■□□□ 1.05
CHMP4A-201ENST00000347519 FIBPO43427 364 aa21.62■■□□□ 1.05
CHMP4A-201ENST00000347519 CCNT1O60563 726 aaKnown RBP21.62■■□□□ 1.05
CHMP4A-201ENST00000347519 CAPN15O75808 1086 aa21.62■■□□□ 1.05
CHMP4A-201ENST00000347519 CYP3A4P08684 503 aa21.62■■□□□ 1.05
CHMP4A-201ENST00000347519 MCM7P33993 719 aa21.62■■□□□ 1.05
CHMP4A-201ENST00000347519 MAP2K1Q02750 393 aaPredicted RBP21.62■■□□□ 1.05
CHMP4A-201ENST00000347519 ARHGEF16Q5VV41 709 aa21.62■■□□□ 1.05
CHMP4A-201ENST00000347519 ABRAQ8N0Z2 381 aa21.62■■□□□ 1.05
CHMP4A-201ENST00000347519 C4orf32Q8N8J7 132 aa21.62■■□□□ 1.05
CHMP4A-201ENST00000347519 CYP2W1Q8TAV3 490 aa21.62■■□□□ 1.05
CHMP4A-201ENST00000347519 TMEM60Q9H2L4 133 aa21.62■■□□□ 1.05
CHMP4A-201ENST00000347519 POLR3EQ9NVU0 708 aa21.62■■□□□ 1.05
CHMP4A-201ENST00000347519 MCM3APO60318 1980 aa21.62■■□□□ 1.05
CHMP4A-201ENST00000347519 SLC37A4O43826 429 aa21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 ALDH5A1P51649 535 aaPredicted RBP21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 USP11P51784 963 aa21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 MRPS9P82933 396 aaKnown RBP21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 ZNF792Q3KQV3 632 aa21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 MORN1Q5T089 497 aa21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 ATL3Q6DD88 541 aa21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 LINC00301Q8NCQ3 95 aa21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 LEO1Q8WVC0 666 aaPredicted RBP21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 MBOAT7Q96N66 472 aa21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 EHMT1Q9H9B1 1298 aa21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 WBP1LQ9NX94 342 aa21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 CYP3A7-CYP3A51PA0A087WV96 503 aa21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 SLC15A5A6NIM6 579 aa21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 FAM86B1E9PN63 330 aa21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 STRNO43815 780 aa21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 FAM86B2P0C5J1 330 aa21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 MYCLP12524 364 aaPredicted RBP21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 CYP3A7P24462 503 aa21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 CIITAP33076 1130 aa21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 CTCFP49711 727 aaPredicted RBP21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 NSUN6Q8TEA1 469 aaKnown RBP21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 RCOR1Q9UKL0 485 aa21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 CFAP45Q9UL16 551 aa21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 IVNS1ABPQ9Y6Y0 642 aa21.61■■□□□ 1.05
CHMP4A-201ENST00000347519 FOXN1O15353 648 aa21.6■■□□□ 1.05
CHMP4A-201ENST00000347519 NR3C2P08235 984 aa21.6■■□□□ 1.05
CHMP4A-201ENST00000347519 LACTBP83111 547 aaPredicted RBP21.6■■□□□ 1.05
CHMP4A-201ENST00000347519 PCNX4Q63HM2 1172 aa21.6■■□□□ 1.05
CHMP4A-201ENST00000347519 PPP4R3AQ6IN85 833 aa21.6■■□□□ 1.05
CHMP4A-201ENST00000347519 POTEDQ86YR6 584 aa21.6■■□□□ 1.05
CHMP4A-201ENST00000347519 DNERQ8NFT8 737 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms