RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 FLT1P17948 1338 aa13.17□□□□□ -0.3
APP-201ENST00000346798 LRRC53A6NM62 1247 aa13.17□□□□□ -0.3
APP-201ENST00000346798 M0R2N6 131 aa13.17□□□□□ -0.3
APP-201ENST00000346798 APBA1Q02410 837 aa13.17□□□□□ -0.3
APP-201ENST00000346798 GFPT1Q06210 699 aaPredicted RBP13.17□□□□□ -0.3
APP-201ENST00000346798 MEA1Q16626 185 aa13.17□□□□□ -0.3
APP-201ENST00000346798 C6orf50Q9HD87 102 aa13.17□□□□□ -0.3
APP-201ENST00000346798 SH3GLB2Q9NR46 395 aa13.17□□□□□ -0.3
APP-201ENST00000346798 TUBBP07437 444 aa13.17□□□□□ -0.3
APP-201ENST00000346798 CACNB1Q02641 598 aaPredicted RBP13.17□□□□□ -0.3
APP-201ENST00000346798 CCNI2Q6ZMN8 369 aaPredicted RBP13.17□□□□□ -0.3
APP-201ENST00000346798 SV2BQ7L1I2 683 aa13.17□□□□□ -0.3
APP-201ENST00000346798 MS4A14Q96JA4 679 aa13.17□□□□□ -0.3
APP-201ENST00000346798 NDST4Q9H3R1 872 aa13.17□□□□□ -0.3
APP-201ENST00000346798 ZHX3Q9H4I2 956 aa13.17□□□□□ -0.3
APP-201ENST00000346798 MYMKA6NI61 221 aa13.16□□□□□ -0.3
APP-201ENST00000346798 TDP2O95551 362 aa13.16□□□□□ -0.3
APP-201ENST00000346798 MAGEA1P43355 309 aa13.16□□□□□ -0.3
APP-201ENST00000346798 TNNI2P48788 182 aa13.16□□□□□ -0.3
APP-201ENST00000346798 NFIXQ14938 502 aa13.16□□□□□ -0.3
APP-201ENST00000346798 NUDT12Q9BQG2 462 aa13.16□□□□□ -0.3
APP-201ENST00000346798 GOLGA6CA6NDK9 693 aa13.16□□□□□ -0.3
APP-201ENST00000346798 GNPATO15228 680 aa13.16□□□□□ -0.3
APP-201ENST00000346798 GOLGA6DP0CG33 693 aa13.16□□□□□ -0.3
APP-201ENST00000346798 RASA1P20936 1047 aa13.16□□□□□ -0.3
APP-201ENST00000346798 AMPD3Q01432 767 aa13.16□□□□□ -0.3
APP-201ENST00000346798 CNNM4Q6P4Q7 775 aa13.16□□□□□ -0.3
APP-201ENST00000346798 REXO1Q8N1G1 1221 aaKnown RBP13.16□□□□□ -0.3
APP-201ENST00000346798 NOC3LQ8WTT2 800 aaKnown RBP13.16□□□□□ -0.3
APP-201ENST00000346798 MMTAG2Q9BU76 263 aaKnown RBP13.16□□□□□ -0.3
APP-201ENST00000346798 GOLGA6AQ9NYA3 693 aa13.16□□□□□ -0.3
APP-201ENST00000346798 ESYT3A0FGR9 886 aa13.16□□□□□ -0.3
APP-201ENST00000346798 USP17L5A8MUK1 530 aa13.16□□□□□ -0.3
APP-201ENST00000346798 BAG3O95817 575 aa13.16□□□□□ -0.3
APP-201ENST00000346798 MCM3P25205 808 aa13.16□□□□□ -0.3
APP-201ENST00000346798 VWA3BQ502W6 1294 aa13.16□□□□□ -0.3
APP-201ENST00000346798 SPTY2D1Q68D10 685 aaPredicted RBP13.16□□□□□ -0.3
APP-201ENST00000346798 CCDC170Q8IYT3 715 aa13.16□□□□□ -0.3
APP-201ENST00000346798 LRRC47Q8N1G4 583 aaKnown RBP13.16□□□□□ -0.3
APP-201ENST00000346798 GPCPD1Q9NPB8 672 aa13.16□□□□□ -0.3
APP-201ENST00000346798 SNX12Q9UMY4 172 aa13.16□□□□□ -0.3
APP-201ENST00000346798 A0A1B0GUL6 1792 aa13.15□□□□□ -0.3
APP-201ENST00000346798 CALCRLQ16602 461 aa13.15□□□□□ -0.3
APP-201ENST00000346798 CLEC4GQ6UXB4 293 aa13.15□□□□□ -0.3
APP-201ENST00000346798 KRT25Q7Z3Z0 450 aa13.15□□□□□ -0.3
APP-201ENST00000346798 NELFCDQ8IXH7 590 aa13.15□□□□□ -0.3
APP-201ENST00000346798 ANKRD2Q9GZV1 360 aa13.15□□□□□ -0.3
APP-201ENST00000346798 SALL4Q9UJQ4 1053 aa13.15□□□□□ -0.3
APP-201ENST00000346798 DOT1LQ8TEK3 1739 aa13.15□□□□□ -0.3
APP-201ENST00000346798 PALM3A6NDB9 673 aaPredicted RBP13.15□□□□□ -0.3
APP-201ENST00000346798 PICALMQ13492 652 aa13.15□□□□□ -0.3
APP-201ENST00000346798 KCTD16Q68DU8 428 aa13.15□□□□□ -0.3
APP-201ENST00000346798 TMED8Q6PL24 325 aaPredicted RBP13.15□□□□□ -0.3
APP-201ENST00000346798 CREG2Q8IUH2 290 aa13.15□□□□□ -0.3
APP-201ENST00000346798 FAM76AQ8TAV0 307 aa13.15□□□□□ -0.3
APP-201ENST00000346798 IFT81Q8WYA0 676 aa13.15□□□□□ -0.3
APP-201ENST00000346798 CEP95Q96GE4 821 aa13.15□□□□□ -0.3
APP-201ENST00000346798 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.15□□□□□ -0.3
APP-201ENST00000346798 PACSIN2Q9UNF0 486 aaPredicted RBP13.15□□□□□ -0.3
APP-201ENST00000346798 ABCA3Q99758 1704 aa13.15□□□□□ -0.3
APP-201ENST00000346798 SLC37A4O43826 429 aa13.15□□□□□ -0.3
APP-201ENST00000346798 GNA11P29992 359 aa13.15□□□□□ -0.3
APP-201ENST00000346798 SLC1A4P43007 532 aa13.15□□□□□ -0.3
APP-201ENST00000346798 CDK8P49336 464 aa13.15□□□□□ -0.3
APP-201ENST00000346798 SPATA4Q8NEY3 305 aa13.15□□□□□ -0.3
APP-201ENST00000346798 TRIM58Q8NG06 486 aa13.15□□□□□ -0.3
APP-201ENST00000346798 SNX29Q8TEQ0 813 aa13.15□□□□□ -0.3
APP-201ENST00000346798 OSBPL9Q96SU4 736 aa13.15□□□□□ -0.3
APP-201ENST00000346798 AGPSO00116 658 aa13.14□□□□□ -0.31
APP-201ENST00000346798 BTDP43251 543 aa13.14□□□□□ -0.31
APP-201ENST00000346798 UBE2SQ16763 222 aa13.14□□□□□ -0.31
APP-201ENST00000346798 CCDC40Q4G0X9 1142 aa13.14□□□□□ -0.31
APP-201ENST00000346798 IQCEQ6IPM2 695 aa13.14□□□□□ -0.31
APP-201ENST00000346798 TEX11Q8IYF3 940 aa13.14□□□□□ -0.31
APP-201ENST00000346798 PLCD3Q8N3E9 789 aa13.14□□□□□ -0.31
APP-201ENST00000346798 RETREG2Q8NC44 543 aa13.14□□□□□ -0.31
APP-201ENST00000346798 ZMYND12Q9H0C1 365 aa13.14□□□□□ -0.31
APP-201ENST00000346798 JRKLQ9Y4A0 524 aa13.14□□□□□ -0.31
APP-201ENST00000346798 NHSL1Q5SYE7 1610 aa13.14□□□□□ -0.31
APP-201ENST00000346798 ZSCAN5CA6NGD5 496 aaPredicted RBP13.14□□□□□ -0.31
APP-201ENST00000346798 F8W031 263 aaPredicted RBP13.14□□□□□ -0.31
APP-201ENST00000346798 TRAF5O00463 557 aa13.14□□□□□ -0.31
APP-201ENST00000346798 PRPF6O94906 941 aaKnown RBP13.14□□□□□ -0.31
APP-201ENST00000346798 CCT5P48643 541 aa13.14□□□□□ -0.31
APP-201ENST00000346798 GRB10Q13322 594 aa13.14□□□□□ -0.31
APP-201ENST00000346798 FAM98CQ17RN3 349 aaKnown RBP13.14□□□□□ -0.31
APP-201ENST00000346798 TPTE2Q6XPS3 522 aa13.14□□□□□ -0.31
APP-201ENST00000346798 KCNK18Q7Z418 384 aa13.14□□□□□ -0.31
APP-201ENST00000346798 DNAAF5Q86Y56 855 aa13.14□□□□□ -0.31
APP-201ENST00000346798 LARP4BQ92615 738 aaKnown RBP13.14□□□□□ -0.31
APP-201ENST00000346798 ALS2CR12Q96Q35 445 aa13.14□□□□□ -0.31
APP-201ENST00000346798 RUFY1Q96T51 708 aa13.14□□□□□ -0.31
APP-201ENST00000346798 C7orf25Q9BPX7 421 aa13.14□□□□□ -0.31
APP-201ENST00000346798 TSPYL1Q9H0U9 437 aa13.14□□□□□ -0.31
APP-201ENST00000346798 SH2D4AQ9H788 454 aa13.14□□□□□ -0.31
APP-201ENST00000346798 FTCDO95954 541 aa13.14□□□□□ -0.31
APP-201ENST00000346798 ERGIC2Q96RQ1 377 aa13.14□□□□□ -0.31
APP-201ENST00000346798 LAD1O00515 517 aa13.13□□□□□ -0.31
APP-201ENST00000346798 MYL1P05976 194 aa13.13□□□□□ -0.31
APP-201ENST00000346798 ATP1A2P50993 1020 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms